RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 A8MU10 97 aa5.67□□□□□ -1.5
PAX6-242ENST00000638878 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
PAX6-242ENST00000638878 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
PAX6-242ENST00000638878 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.51
PAX6-242ENST00000638878 LINC00304Q8N9R0 145 aa5.64□□□□□ -1.51
PAX6-242ENST00000638878 SPINK1P00995 79 aa5.62□□□□□ -1.51
PAX6-242ENST00000638878 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
PAX6-242ENST00000638878 DMAC1Q96GE9 116 aa5.62□□□□□ -1.51
PAX6-242ENST00000638878 LRP2P98164 4655 aa5.61□□□□□ -1.51
PAX6-242ENST00000638878 SPINK7P58062 85 aa5.61□□□□□ -1.51
PAX6-242ENST00000638878 NOTCH2NLQ7Z3S9 236 aa5.6□□□□□ -1.51
PAX6-242ENST00000638878 RBM12B-AS1Q9P1G2 102 aa5.6□□□□□ -1.51
PAX6-242ENST00000638878 Q5W150 140 aa5.59□□□□□ -1.51
PAX6-242ENST00000638878 LINC00313P59037 77 aa5.57□□□□□ -1.52
PAX6-242ENST00000638878 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
PAX6-242ENST00000638878 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
PAX6-242ENST00000638878 XP32Q5T750 250 aa5.55□□□□□ -1.52
PAX6-242ENST00000638878 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
PAX6-242ENST00000638878 A0A1B0GU69 56 aa5.53□□□□□ -1.52
PAX6-242ENST00000638878 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
PAX6-242ENST00000638878 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
PAX6-242ENST00000638878 UQCR11O14957 56 aa5.49□□□□□ -1.53
PAX6-242ENST00000638878 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
PAX6-242ENST00000638878 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
PAX6-242ENST00000638878 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
PAX6-242ENST00000638878 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
PAX6-242ENST00000638878 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.54
PAX6-242ENST00000638878 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
PAX6-242ENST00000638878 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
PAX6-242ENST00000638878 LPAP08519 4548 aa5.42□□□□□ -1.54
PAX6-242ENST00000638878 MUC2Q02817 5179 aa5.35□□□□□ -1.55
PAX6-242ENST00000638878 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.55
PAX6-242ENST00000638878 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
PAX6-242ENST00000638878 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
PAX6-242ENST00000638878 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
PAX6-242ENST00000638878 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
PAX6-242ENST00000638878 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
PAX6-242ENST00000638878 A8MUU9 505 aa5.24□□□□□ -1.57
PAX6-242ENST00000638878 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
PAX6-242ENST00000638878 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
PAX6-242ENST00000638878 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
PAX6-242ENST00000638878 A0A1B0GU33 70 aa5.21□□□□□ -1.58
PAX6-242ENST00000638878 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
PAX6-242ENST00000638878 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
PAX6-242ENST00000638878 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
PAX6-242ENST00000638878 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
PAX6-242ENST00000638878 H1FX-AS1Q4G0G2 97 aa5.18□□□□□ -1.58
PAX6-242ENST00000638878 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
PAX6-242ENST00000638878 FSIP2Q5CZC0 6907 aa5.18□□□□□ -1.58
PAX6-242ENST00000638878 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
PAX6-242ENST00000638878 K7ERS5 55 aa5.16□□□□□ -1.58
PAX6-242ENST00000638878 H0YAA0 97 aa5.16□□□□□ -1.58
PAX6-242ENST00000638878 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
PAX6-242ENST00000638878 COX6B2Q6YFQ2 88 aa5.12□□□□□ -1.59
PAX6-242ENST00000638878 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
PAX6-242ENST00000638878 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
PAX6-242ENST00000638878 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
PAX6-242ENST00000638878 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
PAX6-242ENST00000638878 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
PAX6-242ENST00000638878 ROMO1P60602 79 aa5.01□□□□□ -1.61
PAX6-242ENST00000638878 MT1HP80294 61 aa4.98□□□□□ -1.61
PAX6-242ENST00000638878 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
PAX6-242ENST00000638878 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
PAX6-242ENST00000638878 CAMK2N1Q7Z7J9 78 aa4.91□□□□□ -1.62
PAX6-242ENST00000638878 S4R3F8 94 aa4.91□□□□□ -1.62
PAX6-242ENST00000638878 M0R2T5 61 aa4.87□□□□□ -1.63
PAX6-242ENST00000638878 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
PAX6-242ENST00000638878 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
PAX6-242ENST00000638878 KRTAP13-4Q3LI77 160 aa4.83□□□□□ -1.64
PAX6-242ENST00000638878 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
PAX6-242ENST00000638878 CRIPTQ9P021 101 aa4.81□□□□□ -1.64
PAX6-242ENST00000638878 A0A0D9SG42 100 aa4.8□□□□□ -1.64
PAX6-242ENST00000638878 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
PAX6-242ENST00000638878 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
PAX6-242ENST00000638878 M0QZ58 72 aa4.78□□□□□ -1.64
PAX6-242ENST00000638878 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
PAX6-242ENST00000638878 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
PAX6-242ENST00000638878 P0C880 135 aa4.76□□□□□ -1.65
PAX6-242ENST00000638878 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
PAX6-242ENST00000638878 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
PAX6-242ENST00000638878 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
PAX6-242ENST00000638878 MT2AP02795 61 aa4.67□□□□□ -1.66
PAX6-242ENST00000638878 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.66
PAX6-242ENST00000638878 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
PAX6-242ENST00000638878 MT1FP04733 61 aa4.63□□□□□ -1.67
PAX6-242ENST00000638878 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
PAX6-242ENST00000638878 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
PAX6-242ENST00000638878 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
PAX6-242ENST00000638878 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
PAX6-242ENST00000638878 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
PAX6-242ENST00000638878 USH2AO75445 5202 aa4.58□□□□□ -1.68
PAX6-242ENST00000638878 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
PAX6-242ENST00000638878 R4GN34 69 aa4.53□□□□□ -1.68
PAX6-242ENST00000638878 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
PAX6-242ENST00000638878 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
PAX6-242ENST00000638878 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
PAX6-242ENST00000638878 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
PAX6-242ENST00000638878 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
PAX6-242ENST00000638878 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
PAX6-242ENST00000638878 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms