RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
GFAP-227ENST00000638400 A8MUN3 132 aa6.71□□□□□ -1.34
GFAP-227ENST00000638400 PSPHP1O15172 72 aa6.7□□□□□ -1.34
GFAP-227ENST00000638400 HRES1P13985 223 aa6.67□□□□□ -1.34
GFAP-227ENST00000638400 Q5W150 140 aa6.67□□□□□ -1.34
GFAP-227ENST00000638400 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
GFAP-227ENST00000638400 ACYP2P14621 99 aa6.66□□□□□ -1.34
GFAP-227ENST00000638400 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
GFAP-227ENST00000638400 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
GFAP-227ENST00000638400 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.34
GFAP-227ENST00000638400 IGKV2-30P06310 120 aa6.65□□□□□ -1.34
GFAP-227ENST00000638400 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
GFAP-227ENST00000638400 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
GFAP-227ENST00000638400 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
GFAP-227ENST00000638400 ATP11AUNQ6ZP68 121 aa6.62□□□□□ -1.35
GFAP-227ENST00000638400 H3BS24 57 aa6.6□□□□□ -1.35
GFAP-227ENST00000638400 MT1HP80294 61 aa6.59□□□□□ -1.35
GFAP-227ENST00000638400 CDC42SE1Q9NRR8 79 aa6.58□□□□□ -1.36
GFAP-227ENST00000638400 COX6B2Q6YFQ2 88 aa6.57□□□□□ -1.36
GFAP-227ENST00000638400 C20orf166-AS1Q96NR2 134 aa6.57□□□□□ -1.36
GFAP-227ENST00000638400 KRTAP4-12Q9BQ66 201 aa6.57□□□□□ -1.36
GFAP-227ENST00000638400 A6NED7 52 aa6.56□□□□□ -1.36
GFAP-227ENST00000638400 A8MUU9 505 aa6.55□□□□□ -1.36
GFAP-227ENST00000638400 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
GFAP-227ENST00000638400 IGKV2D-30A0A075B6S6 120 aa6.5□□□□□ -1.37
GFAP-227ENST00000638400 M0R2T5 61 aa6.49□□□□□ -1.37
GFAP-227ENST00000638400 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
GFAP-227ENST00000638400 C7orf65Q6ZTY9 151 aa6.49□□□□□ -1.37
GFAP-227ENST00000638400 LCA10Q71F78 164 aa6.49□□□□□ -1.37
GFAP-227ENST00000638400 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.37
GFAP-227ENST00000638400 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
GFAP-227ENST00000638400 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
GFAP-227ENST00000638400 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
GFAP-227ENST00000638400 SPINK7P58062 85 aa6.42□□□□□ -1.38
GFAP-227ENST00000638400 A0A1B0GU69 56 aa6.41□□□□□ -1.38
GFAP-227ENST00000638400 A6NN06 94 aa6.41□□□□□ -1.38
GFAP-227ENST00000638400 A8MU10 97 aa6.4□□□□□ -1.38
GFAP-227ENST00000638400 KTN1-AS1Q86SY8 53 aa6.4□□□□□ -1.38
GFAP-227ENST00000638400 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
GFAP-227ENST00000638400 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
GFAP-227ENST00000638400 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
GFAP-227ENST00000638400 UQCR11O14957 56 aa6.34□□□□□ -1.39
GFAP-227ENST00000638400 KRTAP9-9Q9BYP9 154 aa6.33□□□□□ -1.4
GFAP-227ENST00000638400 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
GFAP-227ENST00000638400 RBM12B-AS1Q9P1G2 102 aa6.32□□□□□ -1.4
GFAP-227ENST00000638400 SEC61GP60059 68 aa6.28□□□□□ -1.4
GFAP-227ENST00000638400 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
GFAP-227ENST00000638400 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
GFAP-227ENST00000638400 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
GFAP-227ENST00000638400 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
GFAP-227ENST00000638400 MT2AP02795 61 aa6.16□□□□□ -1.42
GFAP-227ENST00000638400 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
GFAP-227ENST00000638400 MT1FP04733 61 aa6.11□□□□□ -1.43
GFAP-227ENST00000638400 USH2AO75445 5202 aa6.11□□□□□ -1.43
GFAP-227ENST00000638400 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
GFAP-227ENST00000638400 A0A1B0GU33 70 aa6.08□□□□□ -1.44
GFAP-227ENST00000638400 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
GFAP-227ENST00000638400 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
GFAP-227ENST00000638400 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
GFAP-227ENST00000638400 H0YAA0 97 aa6.05□□□□□ -1.44
GFAP-227ENST00000638400 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
GFAP-227ENST00000638400 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
GFAP-227ENST00000638400 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
GFAP-227ENST00000638400 K7ERS5 55 aa5.97□□□□□ -1.45
GFAP-227ENST00000638400 S4R3F8 94 aa5.95□□□□□ -1.46
GFAP-227ENST00000638400 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
GFAP-227ENST00000638400 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
GFAP-227ENST00000638400 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
GFAP-227ENST00000638400 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.46
GFAP-227ENST00000638400 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
GFAP-227ENST00000638400 CSAG1Q6PB30 78 aa5.84□□□□□ -1.47
GFAP-227ENST00000638400 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
GFAP-227ENST00000638400 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
GFAP-227ENST00000638400 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
GFAP-227ENST00000638400 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
GFAP-227ENST00000638400 ROMO1P60602 79 aa5.77□□□□□ -1.49
GFAP-227ENST00000638400 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
GFAP-227ENST00000638400 M0QZ58 72 aa5.73□□□□□ -1.49
GFAP-227ENST00000638400 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
GFAP-227ENST00000638400 P0C880 135 aa5.71□□□□□ -1.5
GFAP-227ENST00000638400 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
GFAP-227ENST00000638400 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
GFAP-227ENST00000638400 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
GFAP-227ENST00000638400 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.5
GFAP-227ENST00000638400 A0A0D9SG42 100 aa5.64□□□□□ -1.51
GFAP-227ENST00000638400 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
GFAP-227ENST00000638400 MT1BP07438 61 aa5.6□□□□□ -1.51
GFAP-227ENST00000638400 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
GFAP-227ENST00000638400 CRIPTQ9P021 101 aa5.59□□□□□ -1.51
GFAP-227ENST00000638400 KRTAP12-2P59991 146 aa5.57□□□□□ -1.52
GFAP-227ENST00000638400 KRTAP6-3Q3LI67 103 aa5.5□□□□□ -1.53
GFAP-227ENST00000638400 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
GFAP-227ENST00000638400 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
GFAP-227ENST00000638400 R4GN34 69 aa5.48□□□□□ -1.53
GFAP-227ENST00000638400 NEBP20929 6669 aa5.46□□□□□ -1.54
GFAP-227ENST00000638400 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
GFAP-227ENST00000638400 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
GFAP-227ENST00000638400 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
GFAP-227ENST00000638400 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
GFAP-227ENST00000638400 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms