RNA–Protein interactions for RNA: ENST00000637106.1

VGLL3-204, Transcript of vestigial like family member 3, humanhuman

TSL 5

Gene VGLL3, Length 1,240 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-204ENST00000637106 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.8□□□□□ -1.48
VGLL3-204ENST00000637106 APOBP04114 4563 aaKnown RBP5.79□□□□□ -1.48
VGLL3-204ENST00000637106 NBDYA0A0U1RRE5 68 aa5.79□□□□□ -1.48
VGLL3-204ENST00000637106 SPACA4Q8TDM5 124 aa5.77□□□□□ -1.49
VGLL3-204ENST00000637106 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
VGLL3-204ENST00000637106 Q8N1X5 172 aa5.75□□□□□ -1.49
VGLL3-204ENST00000637106 DMBT1Q9UGM3 2413 aaPredicted RBP5.73□□□□□ -1.49
VGLL3-204ENST00000637106 SPINK1P00995 79 aa5.73□□□□□ -1.49
VGLL3-204ENST00000637106 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
VGLL3-204ENST00000637106 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
VGLL3-204ENST00000637106 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
VGLL3-204ENST00000637106 HERC1Q15751 4861 aa5.7□□□□□ -1.5
VGLL3-204ENST00000637106 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
VGLL3-204ENST00000637106 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
VGLL3-204ENST00000637106 FAT1Q14517 4588 aa5.69□□□□□ -1.5
VGLL3-204ENST00000637106 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
VGLL3-204ENST00000637106 KRTAP1-5Q9BYS1 174 aa5.68□□□□□ -1.5
VGLL3-204ENST00000637106 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
VGLL3-204ENST00000637106 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
VGLL3-204ENST00000637106 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
VGLL3-204ENST00000637106 VPS13BQ7Z7G8 4022 aa5.65□□□□□ -1.5
VGLL3-204ENST00000637106 FLG2Q5D862 2391 aaPredicted RBP5.65□□□□□ -1.51
VGLL3-204ENST00000637106 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
VGLL3-204ENST00000637106 TPRXLQ17RH7 258 aa5.64□□□□□ -1.51
VGLL3-204ENST00000637106 Q6ZRN7 208 aaPredicted RBP5.64□□□□□ -1.51
VGLL3-204ENST00000637106 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
VGLL3-204ENST00000637106 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
VGLL3-204ENST00000637106 Q5VSD8 79 aa5.59□□□□□ -1.51
VGLL3-204ENST00000637106 DNAH8Q96JB1 4490 aa5.58□□□□□ -1.52
VGLL3-204ENST00000637106 KRTAP10-1P60331 282 aa5.56□□□□□ -1.52
VGLL3-204ENST00000637106 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
VGLL3-204ENST00000637106 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
VGLL3-204ENST00000637106 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
VGLL3-204ENST00000637106 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
VGLL3-204ENST00000637106 KRTAP9-6A0A140TA67 174 aa5.52□□□□□ -1.53
VGLL3-204ENST00000637106 SMR3BP02814 79 aaPredicted RBP5.52□□□□□ -1.53
VGLL3-204ENST00000637106 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
VGLL3-204ENST00000637106 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
VGLL3-204ENST00000637106 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.53
VGLL3-204ENST00000637106 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
VGLL3-204ENST00000637106 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
VGLL3-204ENST00000637106 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
VGLL3-204ENST00000637106 S4R3F8 94 aa5.42□□□□□ -1.54
VGLL3-204ENST00000637106 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
VGLL3-204ENST00000637106 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
VGLL3-204ENST00000637106 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.54
VGLL3-204ENST00000637106 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
VGLL3-204ENST00000637106 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
VGLL3-204ENST00000637106 KRTAP10-4P60372 401 aaPredicted RBP5.37□□□□□ -1.55
VGLL3-204ENST00000637106 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
VGLL3-204ENST00000637106 A0A0D9SG42 100 aa5.32□□□□□ -1.56
VGLL3-204ENST00000637106 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
VGLL3-204ENST00000637106 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
VGLL3-204ENST00000637106 TNXBP22105 4242 aa5.29□□□□□ -1.56
VGLL3-204ENST00000637106 M0QZ58 72 aa5.29□□□□□ -1.56
VGLL3-204ENST00000637106 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
VGLL3-204ENST00000637106 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
VGLL3-204ENST00000637106 LRP2P98164 4655 aa5.27□□□□□ -1.57
VGLL3-204ENST00000637106 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
VGLL3-204ENST00000637106 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
VGLL3-204ENST00000637106 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
VGLL3-204ENST00000637106 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
VGLL3-204ENST00000637106 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
VGLL3-204ENST00000637106 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
VGLL3-204ENST00000637106 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
VGLL3-204ENST00000637106 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
VGLL3-204ENST00000637106 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
VGLL3-204ENST00000637106 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
VGLL3-204ENST00000637106 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
VGLL3-204ENST00000637106 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
VGLL3-204ENST00000637106 LPAP08519 4548 aa5.07□□□□□ -1.6
VGLL3-204ENST00000637106 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
VGLL3-204ENST00000637106 INE1O15225 51 aa5□□□□□ -1.61
VGLL3-204ENST00000637106 MUC2Q02817 5179 aa4.98□□□□□ -1.61
VGLL3-204ENST00000637106 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
VGLL3-204ENST00000637106 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
VGLL3-204ENST00000637106 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
VGLL3-204ENST00000637106 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
VGLL3-204ENST00000637106 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
VGLL3-204ENST00000637106 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
VGLL3-204ENST00000637106 R4GN34 69 aa4.84□□□□□ -1.63
VGLL3-204ENST00000637106 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
VGLL3-204ENST00000637106 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
VGLL3-204ENST00000637106 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
VGLL3-204ENST00000637106 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
VGLL3-204ENST00000637106 TNP1P09430 55 aa4.68□□□□□ -1.66
VGLL3-204ENST00000637106 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
VGLL3-204ENST00000637106 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
VGLL3-204ENST00000637106 KRTAP19-2Q3LHN2 52 aa4.48□□□□□ -1.69
VGLL3-204ENST00000637106 MT1HP80294 61 aa4.47□□□□□ -1.69
VGLL3-204ENST00000637106 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
VGLL3-204ENST00000637106 M0R2T5 61 aa4.41□□□□□ -1.7
VGLL3-204ENST00000637106 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
VGLL3-204ENST00000637106 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
VGLL3-204ENST00000637106 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
VGLL3-204ENST00000637106 USH2AO75445 5202 aa4.2□□□□□ -1.74
VGLL3-204ENST00000637106 KRTAP10-10P60014 251 aa4.15□□□□□ -1.75
VGLL3-204ENST00000637106 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
VGLL3-204ENST00000637106 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
VGLL3-204ENST00000637106 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms