RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
CTSD-208ENST00000636843 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
CTSD-208ENST00000636843 V9GYY9 64 aa6.59□□□□□ -1.35
CTSD-208ENST00000636843 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
CTSD-208ENST00000636843 ACYP2P14621 99 aa6.56□□□□□ -1.36
CTSD-208ENST00000636843 DMAC1Q96GE9 116 aa6.55□□□□□ -1.36
CTSD-208ENST00000636843 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
CTSD-208ENST00000636843 C7orf65Q6ZTY9 151 aa6.55□□□□□ -1.36
CTSD-208ENST00000636843 Q75L30 129 aa6.55□□□□□ -1.36
CTSD-208ENST00000636843 CHKB-CPT1BH3BT56 60 aa6.45□□□□□ -1.38
CTSD-208ENST00000636843 A8MUN3 132 aa6.45□□□□□ -1.38
CTSD-208ENST00000636843 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
CTSD-208ENST00000636843 PSPHP1O15172 72 aa6.43□□□□□ -1.38
CTSD-208ENST00000636843 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
CTSD-208ENST00000636843 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
CTSD-208ENST00000636843 SPINK7P58062 85 aa6.4□□□□□ -1.39
CTSD-208ENST00000636843 USH2AO75445 5202 aa6.39□□□□□ -1.39
CTSD-208ENST00000636843 Q5VV11 94 aa6.39□□□□□ -1.39
CTSD-208ENST00000636843 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
CTSD-208ENST00000636843 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
CTSD-208ENST00000636843 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
CTSD-208ENST00000636843 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
CTSD-208ENST00000636843 PRO0628Q9UI54 55 aa6.35□□□□□ -1.39
CTSD-208ENST00000636843 SSPOA2VEC9 5147 aa6.34□□□□□ -1.39
CTSD-208ENST00000636843 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
CTSD-208ENST00000636843 MT2AP02795 61 aa6.29□□□□□ -1.4
CTSD-208ENST00000636843 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
CTSD-208ENST00000636843 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
CTSD-208ENST00000636843 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
CTSD-208ENST00000636843 A0A1B0GU69 56 aa6.26□□□□□ -1.41
CTSD-208ENST00000636843 A6NED7 52 aa6.26□□□□□ -1.41
CTSD-208ENST00000636843 MT1FP04733 61 aa6.24□□□□□ -1.41
CTSD-208ENST00000636843 LCE2BO14633 110 aa6.23□□□□□ -1.41
CTSD-208ENST00000636843 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
CTSD-208ENST00000636843 KRTAP10-10P60014 251 aa6.22□□□□□ -1.41
CTSD-208ENST00000636843 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
CTSD-208ENST00000636843 CDC42SE1Q9NRR8 79 aa6.2□□□□□ -1.42
CTSD-208ENST00000636843 SEC61GP60059 68 aa6.19□□□□□ -1.42
CTSD-208ENST00000636843 LCA10Q71F78 164 aa6.16□□□□□ -1.42
CTSD-208ENST00000636843 UQCR11O14957 56 aa6.13□□□□□ -1.43
CTSD-208ENST00000636843 A8MU10 97 aa6.11□□□□□ -1.43
CTSD-208ENST00000636843 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.44
CTSD-208ENST00000636843 S4R3F8 94 aa6.09□□□□□ -1.44
CTSD-208ENST00000636843 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
CTSD-208ENST00000636843 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
CTSD-208ENST00000636843 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
CTSD-208ENST00000636843 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
CTSD-208ENST00000636843 KRTAP3-3Q9BYR6 98 aa6.04□□□□□ -1.44
CTSD-208ENST00000636843 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
CTSD-208ENST00000636843 A0A1B0GU33 70 aa6□□□□□ -1.45
CTSD-208ENST00000636843 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.45
CTSD-208ENST00000636843 A6NN06 94 aa5.95□□□□□ -1.46
CTSD-208ENST00000636843 H0YAA0 97 aa5.92□□□□□ -1.46
CTSD-208ENST00000636843 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
CTSD-208ENST00000636843 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
CTSD-208ENST00000636843 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
CTSD-208ENST00000636843 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
CTSD-208ENST00000636843 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
CTSD-208ENST00000636843 P0C880 135 aa5.8□□□□□ -1.48
CTSD-208ENST00000636843 K7ERS5 55 aa5.79□□□□□ -1.48
CTSD-208ENST00000636843 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
CTSD-208ENST00000636843 M0QZ58 72 aa5.74□□□□□ -1.49
CTSD-208ENST00000636843 A0A0D9SG42 100 aa5.68□□□□□ -1.5
CTSD-208ENST00000636843 MT1BP07438 61 aa5.68□□□□□ -1.5
CTSD-208ENST00000636843 NEBP20929 6669 aa5.67□□□□□ -1.5
CTSD-208ENST00000636843 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
CTSD-208ENST00000636843 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
CTSD-208ENST00000636843 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
CTSD-208ENST00000636843 R4GN34 69 aa5.62□□□□□ -1.51
CTSD-208ENST00000636843 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
CTSD-208ENST00000636843 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
CTSD-208ENST00000636843 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
CTSD-208ENST00000636843 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
CTSD-208ENST00000636843 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
CTSD-208ENST00000636843 ROMO1P60602 79 aa5.55□□□□□ -1.52
CTSD-208ENST00000636843 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
CTSD-208ENST00000636843 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
CTSD-208ENST00000636843 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
CTSD-208ENST00000636843 CRIPTQ9P021 101 aa5.51□□□□□ -1.53
CTSD-208ENST00000636843 KMT2DO14686 5537 aa5.5□□□□□ -1.53
CTSD-208ENST00000636843 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
CTSD-208ENST00000636843 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
CTSD-208ENST00000636843 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
CTSD-208ENST00000636843 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
CTSD-208ENST00000636843 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
CTSD-208ENST00000636843 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
CTSD-208ENST00000636843 SPRR2EP22531 72 aa5.3□□□□□ -1.56
CTSD-208ENST00000636843 SPRR2BP35325 72 aa5.3□□□□□ -1.56
CTSD-208ENST00000636843 SPRR2AP35326 72 aa5.3□□□□□ -1.56
CTSD-208ENST00000636843 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
CTSD-208ENST00000636843 MT1XP80297 61 aa5.27□□□□□ -1.57
CTSD-208ENST00000636843 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
CTSD-208ENST00000636843 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
CTSD-208ENST00000636843 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
CTSD-208ENST00000636843 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
CTSD-208ENST00000636843 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
CTSD-208ENST00000636843 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
CTSD-208ENST00000636843 SPRR2DP22532 72 aa5.13□□□□□ -1.59
CTSD-208ENST00000636843 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
CTSD-208ENST00000636843 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms