RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
PNKP-226ENST00000636840 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
PNKP-226ENST00000636840 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.8
PNKP-226ENST00000636840 ACYP2P14621 99 aa3.82□□□□□ -1.8
PNKP-226ENST00000636840 SERP2Q8N6R1 65 aa3.82□□□□□ -1.8
PNKP-226ENST00000636840 KRTAP3-3Q9BYR6 98 aa3.81□□□□□ -1.8
PNKP-226ENST00000636840 DMAC1Q96GE9 116 aa3.8□□□□□ -1.8
PNKP-226ENST00000636840 USH2AO75445 5202 aa3.79□□□□□ -1.8
PNKP-226ENST00000636840 LCE2BO14633 110 aa3.79□□□□□ -1.8
PNKP-226ENST00000636840 C20orf197Q8N268 126 aa3.78□□□□□ -1.8
PNKP-226ENST00000636840 SPTSSBQ8NFR3 76 aa3.78□□□□□ -1.8
PNKP-226ENST00000636840 CRIPTQ9P021 101 aa3.78□□□□□ -1.8
PNKP-226ENST00000636840 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
PNKP-226ENST00000636840 H0YAA0 97 aa3.77□□□□□ -1.81
PNKP-226ENST00000636840 CHKB-CPT1BH3BT56 60 aa3.75□□□□□ -1.81
PNKP-226ENST00000636840 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
PNKP-226ENST00000636840 COX7CP15954 63 aa3.73□□□□□ -1.81
PNKP-226ENST00000636840 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
PNKP-226ENST00000636840 SSPOA2VEC9 5147 aa3.71□□□□□ -1.81
PNKP-226ENST00000636840 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.82
PNKP-226ENST00000636840 Q5VV11 94 aa3.7□□□□□ -1.82
PNKP-226ENST00000636840 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
PNKP-226ENST00000636840 ANAPC13Q9BS18 74 aa3.68□□□□□ -1.82
PNKP-226ENST00000636840 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
PNKP-226ENST00000636840 R4GN34 69 aa3.67□□□□□ -1.82
PNKP-226ENST00000636840 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.83
PNKP-226ENST00000636840 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
PNKP-226ENST00000636840 M0QZ58 72 aa3.62□□□□□ -1.83
PNKP-226ENST00000636840 P0C880 135 aa3.62□□□□□ -1.83
PNKP-226ENST00000636840 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
PNKP-226ENST00000636840 H7BZZ5 65 aa3.61□□□□□ -1.83
PNKP-226ENST00000636840 MT1BP07438 61 aa3.61□□□□□ -1.83
PNKP-226ENST00000636840 COA5Q86WW8 74 aa3.61□□□□□ -1.83
PNKP-226ENST00000636840 A6NN06 94 aa3.6□□□□□ -1.83
PNKP-226ENST00000636840 SEC61GP60059 68 aa3.6□□□□□ -1.83
PNKP-226ENST00000636840 KRTAP3-2Q9BYR7 98 aa3.59□□□□□ -1.83
PNKP-226ENST00000636840 SERP1Q9Y6X1 66 aa3.59□□□□□ -1.83
PNKP-226ENST00000636840 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
PNKP-226ENST00000636840 LINC01554Q52M75 96 aa3.57□□□□□ -1.84
PNKP-226ENST00000636840 CCDC179H3BU77 68 aa3.55□□□□□ -1.84
PNKP-226ENST00000636840 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
PNKP-226ENST00000636840 ATP5EP56381 51 aaPredicted RBP3.54□□□□□ -1.84
PNKP-226ENST00000636840 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
PNKP-226ENST00000636840 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
PNKP-226ENST00000636840 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
PNKP-226ENST00000636840 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
PNKP-226ENST00000636840 A0A1B0GU69 56 aa3.47□□□□□ -1.85
PNKP-226ENST00000636840 TMEM258P61165 79 aa3.47□□□□□ -1.85
PNKP-226ENST00000636840 A0A1B0GU33 70 aa3.46□□□□□ -1.86
PNKP-226ENST00000636840 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
PNKP-226ENST00000636840 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
PNKP-226ENST00000636840 MT1XP80297 61 aa3.41□□□□□ -1.86
PNKP-226ENST00000636840 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
PNKP-226ENST00000636840 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.87
PNKP-226ENST00000636840 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.87
PNKP-226ENST00000636840 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
PNKP-226ENST00000636840 A0A0D9SG42 100 aa3.39□□□□□ -1.87
PNKP-226ENST00000636840 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
PNKP-226ENST00000636840 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
PNKP-226ENST00000636840 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
PNKP-226ENST00000636840 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
PNKP-226ENST00000636840 V9GYY9 64 aa3.32□□□□□ -1.88
PNKP-226ENST00000636840 UQCR11O14957 56 aa3.31□□□□□ -1.88
PNKP-226ENST00000636840 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
PNKP-226ENST00000636840 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
PNKP-226ENST00000636840 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
PNKP-226ENST00000636840 PCP4P48539 62 aa3.28□□□□□ -1.88
PNKP-226ENST00000636840 A8MU10 97 aa3.27□□□□□ -1.89
PNKP-226ENST00000636840 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
PNKP-226ENST00000636840 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
PNKP-226ENST00000636840 KMT2DO14686 5537 aa3.26□□□□□ -1.89
PNKP-226ENST00000636840 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
PNKP-226ENST00000636840 Q1T7F1 81 aa3.25□□□□□ -1.89
PNKP-226ENST00000636840 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
PNKP-226ENST00000636840 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
PNKP-226ENST00000636840 KRTAP4-8A0A0G2JLE6 195 aa3.22□□□□□ -1.89
PNKP-226ENST00000636840 K7ERS5 55 aa3.22□□□□□ -1.89
PNKP-226ENST00000636840 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
PNKP-226ENST00000636840 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
PNKP-226ENST00000636840 PSPHP1O15172 72 aa3.21□□□□□ -1.9
PNKP-226ENST00000636840 MDN1Q9NU22 5596 aa3.21□□□□□ -1.9
PNKP-226ENST00000636840 NEBP20929 6669 aa3.18□□□□□ -1.9
PNKP-226ENST00000636840 TNP1P09430 55 aa3.18□□□□□ -1.9
PNKP-226ENST00000636840 SPRR2EP22531 72 aa3.18□□□□□ -1.9
PNKP-226ENST00000636840 SPRR2BP35325 72 aa3.18□□□□□ -1.9
PNKP-226ENST00000636840 SPRR2AP35326 72 aa3.18□□□□□ -1.9
PNKP-226ENST00000636840 A6NED7 52 aa3.15□□□□□ -1.91
PNKP-226ENST00000636840 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
PNKP-226ENST00000636840 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
PNKP-226ENST00000636840 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
PNKP-226ENST00000636840 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
PNKP-226ENST00000636840 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
PNKP-226ENST00000636840 SPRR2DP22532 72 aa3.07□□□□□ -1.92
PNKP-226ENST00000636840 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
PNKP-226ENST00000636840 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
PNKP-226ENST00000636840 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
PNKP-226ENST00000636840 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
PNKP-226ENST00000636840 MT1EP04732 61 aa3.02□□□□□ -1.93
PNKP-226ENST00000636840 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
PNKP-226ENST00000636840 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms