RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
CACNA1A-229ENST00000636670 MP68P56378 58 aa7.7□□□□□ -1.18
CACNA1A-229ENST00000636670 S4R3F8 94 aa7.7□□□□□ -1.18
CACNA1A-229ENST00000636670 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
CACNA1A-229ENST00000636670 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
CACNA1A-229ENST00000636670 SCGB1A1P11684 91 aa7.67□□□□□ -1.18
CACNA1A-229ENST00000636670 C5orf47Q569G3 176 aa7.67□□□□□ -1.18
CACNA1A-229ENST00000636670 H3BPC8 53 aa7.66□□□□□ -1.18
CACNA1A-229ENST00000636670 LCA10Q71F78 164 aa7.63□□□□□ -1.19
CACNA1A-229ENST00000636670 FAM236AA0A1B0GUQ0 79 aa7.6□□□□□ -1.19
CACNA1A-229ENST00000636670 FAM236BA0A1B0GV22 79 aa7.6□□□□□ -1.19
CACNA1A-229ENST00000636670 A8MUN3 132 aa7.59□□□□□ -1.19
CACNA1A-229ENST00000636670 KLKP1Q107X0 134 aa7.59□□□□□ -1.19
CACNA1A-229ENST00000636670 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
CACNA1A-229ENST00000636670 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
CACNA1A-229ENST00000636670 TRAV7A0A075B6U4 112 aa7.54□□□□□ -1.2
CACNA1A-229ENST00000636670 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
CACNA1A-229ENST00000636670 NDUFC1O43677 76 aa7.45□□□□□ -1.22
CACNA1A-229ENST00000636670 KRTAP2-3P0C7H8 128 aa7.45□□□□□ -1.22
CACNA1A-229ENST00000636670 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
CACNA1A-229ENST00000636670 KRTAP2-4Q9BYR9 128 aa7.45□□□□□ -1.22
CACNA1A-229ENST00000636670 KMT2DO14686 5537 aa7.42□□□□□ -1.22
CACNA1A-229ENST00000636670 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
CACNA1A-229ENST00000636670 H0YAA0 97 aa7.37□□□□□ -1.23
CACNA1A-229ENST00000636670 SERP2Q8N6R1 65 aa7.37□□□□□ -1.23
CACNA1A-229ENST00000636670 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
CACNA1A-229ENST00000636670 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
CACNA1A-229ENST00000636670 SPRR2GQ9BYE4 73 aa7.31□□□□□ -1.24
CACNA1A-229ENST00000636670 C20orf197Q8N268 126 aa7.3□□□□□ -1.24
CACNA1A-229ENST00000636670 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
CACNA1A-229ENST00000636670 ACYP2P14621 99 aa7.28□□□□□ -1.24
CACNA1A-229ENST00000636670 SPANXA2-OT1Q8N9U9 137 aa7.26□□□□□ -1.25
CACNA1A-229ENST00000636670 A6NN06 94 aa7.24□□□□□ -1.25
CACNA1A-229ENST00000636670 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
CACNA1A-229ENST00000636670 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
CACNA1A-229ENST00000636670 COX7CP15954 63 aa7.21□□□□□ -1.26
CACNA1A-229ENST00000636670 Q5VV11 94 aa7.2□□□□□ -1.26
CACNA1A-229ENST00000636670 SPTSSBQ8NFR3 76 aa7.18□□□□□ -1.26
CACNA1A-229ENST00000636670 MT1BP07438 61 aa7.17□□□□□ -1.26
CACNA1A-229ENST00000636670 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
CACNA1A-229ENST00000636670 KRTAP2-2Q9BYT5 123 aa7.16□□□□□ -1.26
CACNA1A-229ENST00000636670 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
CACNA1A-229ENST00000636670 P0C880 135 aa7.1□□□□□ -1.27
CACNA1A-229ENST00000636670 GPR98Q8WXG9 6306 aa7.09□□□□□ -1.27
CACNA1A-229ENST00000636670 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
CACNA1A-229ENST00000636670 ANAPC13Q9BS18 74 aa7.07□□□□□ -1.28
CACNA1A-229ENST00000636670 R4GN34 69 aa7.06□□□□□ -1.28
CACNA1A-229ENST00000636670 H7BZZ5 65 aa7.05□□□□□ -1.28
CACNA1A-229ENST00000636670 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
CACNA1A-229ENST00000636670 COA5Q86WW8 74 aa7.02□□□□□ -1.29
CACNA1A-229ENST00000636670 M0QZ58 72 aa7.01□□□□□ -1.29
CACNA1A-229ENST00000636670 SPRR2EP22531 72 aa7.01□□□□□ -1.29
CACNA1A-229ENST00000636670 SPRR2BP35325 72 aa7.01□□□□□ -1.29
CACNA1A-229ENST00000636670 SPRR2AP35326 72 aa7.01□□□□□ -1.29
CACNA1A-229ENST00000636670 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
CACNA1A-229ENST00000636670 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
CACNA1A-229ENST00000636670 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
CACNA1A-229ENST00000636670 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
CACNA1A-229ENST00000636670 LINC01554Q52M75 96 aa6.85□□□□□ -1.31
CACNA1A-229ENST00000636670 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
CACNA1A-229ENST00000636670 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
CACNA1A-229ENST00000636670 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
CACNA1A-229ENST00000636670 SPRR2DP22532 72 aa6.79□□□□□ -1.32
CACNA1A-229ENST00000636670 SEC61GP60059 68 aa6.79□□□□□ -1.32
CACNA1A-229ENST00000636670 MT1XP80297 61 aa6.78□□□□□ -1.32
CACNA1A-229ENST00000636670 SERP1Q9Y6X1 66 aa6.77□□□□□ -1.33
CACNA1A-229ENST00000636670 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
CACNA1A-229ENST00000636670 TMEM258P61165 79 aa6.72□□□□□ -1.33
CACNA1A-229ENST00000636670 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
CACNA1A-229ENST00000636670 A0A1B0GU69 56 aa6.65□□□□□ -1.34
CACNA1A-229ENST00000636670 A0A1B0GU33 70 aa6.63□□□□□ -1.35
CACNA1A-229ENST00000636670 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
CACNA1A-229ENST00000636670 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
CACNA1A-229ENST00000636670 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
CACNA1A-229ENST00000636670 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
CACNA1A-229ENST00000636670 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
CACNA1A-229ENST00000636670 A0A0D9SG42 100 aa6.53□□□□□ -1.36
CACNA1A-229ENST00000636670 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
CACNA1A-229ENST00000636670 LINC01558Q9Y6Z2 57 aa6.52□□□□□ -1.37
CACNA1A-229ENST00000636670 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
CACNA1A-229ENST00000636670 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.38
CACNA1A-229ENST00000636670 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
CACNA1A-229ENST00000636670 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
CACNA1A-229ENST00000636670 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
CACNA1A-229ENST00000636670 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
CACNA1A-229ENST00000636670 A8MU10 97 aa6.38□□□□□ -1.39
CACNA1A-229ENST00000636670 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
CACNA1A-229ENST00000636670 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
CACNA1A-229ENST00000636670 UQCR11O14957 56 aa6.32□□□□□ -1.4
CACNA1A-229ENST00000636670 V9GYY9 64 aa6.31□□□□□ -1.4
CACNA1A-229ENST00000636670 PCP4P48539 62 aa6.27□□□□□ -1.41
CACNA1A-229ENST00000636670 Q1T7F1 81 aa6.25□□□□□ -1.41
CACNA1A-229ENST00000636670 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
CACNA1A-229ENST00000636670 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
CACNA1A-229ENST00000636670 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
CACNA1A-229ENST00000636670 KRTAP5-10Q6L8G5 202 aa6.18□□□□□ -1.42
CACNA1A-229ENST00000636670 PSPHP1O15172 72 aa6.17□□□□□ -1.42
CACNA1A-229ENST00000636670 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
CACNA1A-229ENST00000636670 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
CACNA1A-229ENST00000636670 C10orf95Q9H7T3 257 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms