RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 LCA10Q71F78 164 aa6.48□□□□□ -1.37
CHRNA4-216ENST00000636652 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
CHRNA4-216ENST00000636652 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
CHRNA4-216ENST00000636652 CSAG1Q6PB30 78 aa6.42□□□□□ -1.38
CHRNA4-216ENST00000636652 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.38
CHRNA4-216ENST00000636652 PCP4P48539 62 aa6.4□□□□□ -1.38
CHRNA4-216ENST00000636652 ATP5EP56381 51 aaPredicted RBP6.4□□□□□ -1.38
CHRNA4-216ENST00000636652 TMEM258P61165 79 aa6.38□□□□□ -1.39
CHRNA4-216ENST00000636652 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
CHRNA4-216ENST00000636652 COA5Q86WW8 74 aa6.35□□□□□ -1.39
CHRNA4-216ENST00000636652 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
CHRNA4-216ENST00000636652 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
CHRNA4-216ENST00000636652 MT2AP02795 61 aa6.29□□□□□ -1.4
CHRNA4-216ENST00000636652 H0YAA0 97 aa6.26□□□□□ -1.41
CHRNA4-216ENST00000636652 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
CHRNA4-216ENST00000636652 MT1FP04733 61 aa6.24□□□□□ -1.41
CHRNA4-216ENST00000636652 KRTAP10-10P60014 251 aa6.22□□□□□ -1.41
CHRNA4-216ENST00000636652 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
CHRNA4-216ENST00000636652 SERP1Q9Y6X1 66 aa6.18□□□□□ -1.42
CHRNA4-216ENST00000636652 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
CHRNA4-216ENST00000636652 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
CHRNA4-216ENST00000636652 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
CHRNA4-216ENST00000636652 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
CHRNA4-216ENST00000636652 P0C880 135 aa6.1□□□□□ -1.43
CHRNA4-216ENST00000636652 SEC61GP60059 68 aa6.07□□□□□ -1.44
CHRNA4-216ENST00000636652 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
CHRNA4-216ENST00000636652 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
CHRNA4-216ENST00000636652 A0A1B0GU69 56 aa6.02□□□□□ -1.45
CHRNA4-216ENST00000636652 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
CHRNA4-216ENST00000636652 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
CHRNA4-216ENST00000636652 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
CHRNA4-216ENST00000636652 R4GN34 69 aa6□□□□□ -1.45
CHRNA4-216ENST00000636652 LCE2BO14633 110 aa5.98□□□□□ -1.45
CHRNA4-216ENST00000636652 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
CHRNA4-216ENST00000636652 SMIM26A0A096LP01 95 aa5.97□□□□□ -1.45
CHRNA4-216ENST00000636652 M0QZ58 72 aa5.97□□□□□ -1.45
CHRNA4-216ENST00000636652 V9GYY9 64 aa5.95□□□□□ -1.46
CHRNA4-216ENST00000636652 A0A1B0GU33 70 aa5.92□□□□□ -1.46
CHRNA4-216ENST00000636652 Q1T7F1 81 aa5.92□□□□□ -1.46
CHRNA4-216ENST00000636652 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
CHRNA4-216ENST00000636652 USH2AO75445 5202 aa5.91□□□□□ -1.46
CHRNA4-216ENST00000636652 Q5VV11 94 aa5.89□□□□□ -1.47
CHRNA4-216ENST00000636652 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
CHRNA4-216ENST00000636652 MT1BP07438 61 aa5.85□□□□□ -1.47
CHRNA4-216ENST00000636652 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
CHRNA4-216ENST00000636652 PSPHP1O15172 72 aa5.81□□□□□ -1.48
CHRNA4-216ENST00000636652 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
CHRNA4-216ENST00000636652 A6NN06 94 aa5.78□□□□□ -1.48
CHRNA4-216ENST00000636652 UQCR11O14957 56 aa5.78□□□□□ -1.48
CHRNA4-216ENST00000636652 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
CHRNA4-216ENST00000636652 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
CHRNA4-216ENST00000636652 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
CHRNA4-216ENST00000636652 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
CHRNA4-216ENST00000636652 A0A0D9SG42 100 aa5.74□□□□□ -1.49
CHRNA4-216ENST00000636652 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
CHRNA4-216ENST00000636652 A8MU10 97 aa5.69□□□□□ -1.5
CHRNA4-216ENST00000636652 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
CHRNA4-216ENST00000636652 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
CHRNA4-216ENST00000636652 A6NED7 52 aa5.66□□□□□ -1.5
CHRNA4-216ENST00000636652 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
CHRNA4-216ENST00000636652 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
CHRNA4-216ENST00000636652 SPINT4Q6UDR6 99 aa5.63□□□□□ -1.51
CHRNA4-216ENST00000636652 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
CHRNA4-216ENST00000636652 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
CHRNA4-216ENST00000636652 MT1XP80297 61 aa5.59□□□□□ -1.51
CHRNA4-216ENST00000636652 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
CHRNA4-216ENST00000636652 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
CHRNA4-216ENST00000636652 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
CHRNA4-216ENST00000636652 K7ERS5 55 aa5.51□□□□□ -1.53
CHRNA4-216ENST00000636652 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
CHRNA4-216ENST00000636652 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
CHRNA4-216ENST00000636652 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
CHRNA4-216ENST00000636652 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
CHRNA4-216ENST00000636652 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
CHRNA4-216ENST00000636652 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
CHRNA4-216ENST00000636652 TNP1P09430 55 aa5.27□□□□□ -1.57
CHRNA4-216ENST00000636652 ROMO1P60602 79 aa5.21□□□□□ -1.58
CHRNA4-216ENST00000636652 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
CHRNA4-216ENST00000636652 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
CHRNA4-216ENST00000636652 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
CHRNA4-216ENST00000636652 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
CHRNA4-216ENST00000636652 KMT2DO14686 5537 aa5.16□□□□□ -1.58
CHRNA4-216ENST00000636652 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.58
CHRNA4-216ENST00000636652 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
CHRNA4-216ENST00000636652 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
CHRNA4-216ENST00000636652 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
CHRNA4-216ENST00000636652 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
CHRNA4-216ENST00000636652 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
CHRNA4-216ENST00000636652 PMAIP1Q13794 54 aa5.06□□□□□ -1.6
CHRNA4-216ENST00000636652 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
CHRNA4-216ENST00000636652 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
CHRNA4-216ENST00000636652 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
CHRNA4-216ENST00000636652 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
CHRNA4-216ENST00000636652 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
CHRNA4-216ENST00000636652 MT1EP04732 61 aa4.93□□□□□ -1.62
CHRNA4-216ENST00000636652 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
CHRNA4-216ENST00000636652 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
CHRNA4-216ENST00000636652 NEBP20929 6669 aa4.88□□□□□ -1.63
CHRNA4-216ENST00000636652 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
CHRNA4-216ENST00000636652 SPRR2EP22531 72 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms