RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
CLN8-209ENST00000635970 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
CLN8-209ENST00000635970 LPAP08519 4548 aa8.59□□□□□ -1.04
CLN8-209ENST00000635970 SPINK1P00995 79 aa8.57□□□□□ -1.04
CLN8-209ENST00000635970 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
CLN8-209ENST00000635970 LRP2P98164 4655 aa8.56□□□□□ -1.04
CLN8-209ENST00000635970 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
CLN8-209ENST00000635970 RPS29P62273 56 aaKnown RBP8.52□□□□□ -1.05
CLN8-209ENST00000635970 UBR4Q5T4S7 5183 aa8.5□□□□□ -1.05
CLN8-209ENST00000635970 PRAC1Q96KF2 57 aa8.45□□□□□ -1.06
CLN8-209ENST00000635970 LINC01554Q52M75 96 aa8.42□□□□□ -1.06
CLN8-209ENST00000635970 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
CLN8-209ENST00000635970 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
CLN8-209ENST00000635970 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
CLN8-209ENST00000635970 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
CLN8-209ENST00000635970 RNF213Q63HN8 5207 aa8.32□□□□□ -1.08
CLN8-209ENST00000635970 C9orf92A6NGG3 77 aa8.27□□□□□ -1.09
CLN8-209ENST00000635970 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
CLN8-209ENST00000635970 A8MUU9 505 aa8.24□□□□□ -1.09
CLN8-209ENST00000635970 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
CLN8-209ENST00000635970 XP32Q5T750 250 aa8.22□□□□□ -1.09
CLN8-209ENST00000635970 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
CLN8-209ENST00000635970 MUC2Q02817 5179 aa8.22□□□□□ -1.09
CLN8-209ENST00000635970 A0A1B0GU33 70 aa8.2□□□□□ -1.1
CLN8-209ENST00000635970 H0YAA0 97 aa8.2□□□□□ -1.1
CLN8-209ENST00000635970 H1FX-AS1Q4G0G2 97 aa8.15□□□□□ -1.1
CLN8-209ENST00000635970 KRTAP3-1Q9BYR8 98 aa8.12□□□□□ -1.11
CLN8-209ENST00000635970 K7ERS5 55 aa8.1□□□□□ -1.11
CLN8-209ENST00000635970 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
CLN8-209ENST00000635970 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
CLN8-209ENST00000635970 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
CLN8-209ENST00000635970 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
CLN8-209ENST00000635970 KRTAP4-1Q9BYQ7 146 aa8.04□□□□□ -1.12
CLN8-209ENST00000635970 ROMO1P60602 79 aa7.9□□□□□ -1.14
CLN8-209ENST00000635970 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.15
CLN8-209ENST00000635970 H3BS24 57 aa7.86□□□□□ -1.15
CLN8-209ENST00000635970 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
CLN8-209ENST00000635970 KRTAP19-2Q3LHN2 52 aa7.79□□□□□ -1.16
CLN8-209ENST00000635970 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
CLN8-209ENST00000635970 S4R3F8 94 aa7.73□□□□□ -1.17
CLN8-209ENST00000635970 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
CLN8-209ENST00000635970 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
CLN8-209ENST00000635970 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
CLN8-209ENST00000635970 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.19
CLN8-209ENST00000635970 A0A0D9SG42 100 aa7.63□□□□□ -1.19
CLN8-209ENST00000635970 MT1HP80294 61 aa7.63□□□□□ -1.19
CLN8-209ENST00000635970 P0C880 135 aa7.57□□□□□ -1.2
CLN8-209ENST00000635970 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
CLN8-209ENST00000635970 M0QZ58 72 aa7.51□□□□□ -1.21
CLN8-209ENST00000635970 M0R2T5 61 aa7.5□□□□□ -1.21
CLN8-209ENST00000635970 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
CLN8-209ENST00000635970 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
CLN8-209ENST00000635970 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
CLN8-209ENST00000635970 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
CLN8-209ENST00000635970 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
CLN8-209ENST00000635970 LCE2BO14633 110 aa7.28□□□□□ -1.24
CLN8-209ENST00000635970 KRTAP9-8Q9BYQ0 159 aa7.26□□□□□ -1.25
CLN8-209ENST00000635970 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
CLN8-209ENST00000635970 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
CLN8-209ENST00000635970 MT2AP02795 61 aa7.2□□□□□ -1.26
CLN8-209ENST00000635970 R4GN34 69 aa7.18□□□□□ -1.26
CLN8-209ENST00000635970 MT1FP04733 61 aa7.15□□□□□ -1.26
CLN8-209ENST00000635970 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
CLN8-209ENST00000635970 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
CLN8-209ENST00000635970 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
CLN8-209ENST00000635970 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
CLN8-209ENST00000635970 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
CLN8-209ENST00000635970 USH2AO75445 5202 aa6.96□□□□□ -1.3
CLN8-209ENST00000635970 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
CLN8-209ENST00000635970 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
CLN8-209ENST00000635970 SSPOA2VEC9 5147 aa6.84□□□□□ -1.32
CLN8-209ENST00000635970 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
CLN8-209ENST00000635970 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
CLN8-209ENST00000635970 LUZP6Q538Z0 58 aa6.8□□□□□ -1.32
CLN8-209ENST00000635970 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
CLN8-209ENST00000635970 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
CLN8-209ENST00000635970 TNP1P09430 55 aa6.67□□□□□ -1.34
CLN8-209ENST00000635970 MT1BP07438 61 aa6.64□□□□□ -1.35
CLN8-209ENST00000635970 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
CLN8-209ENST00000635970 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
CLN8-209ENST00000635970 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
CLN8-209ENST00000635970 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
CLN8-209ENST00000635970 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
CLN8-209ENST00000635970 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
CLN8-209ENST00000635970 KRTAP10-5P60370 271 aa6.4□□□□□ -1.39
CLN8-209ENST00000635970 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
CLN8-209ENST00000635970 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
CLN8-209ENST00000635970 MT1XP80297 61 aa6.3□□□□□ -1.4
CLN8-209ENST00000635970 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
CLN8-209ENST00000635970 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
CLN8-209ENST00000635970 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
CLN8-209ENST00000635970 KMT2DO14686 5537 aa6.14□□□□□ -1.43
CLN8-209ENST00000635970 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
CLN8-209ENST00000635970 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
CLN8-209ENST00000635970 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
CLN8-209ENST00000635970 INE1O15225 51 aa6.02□□□□□ -1.45
CLN8-209ENST00000635970 MUC12Q9UKN1 5478 aa5.96□□□□□ -1.45
CLN8-209ENST00000635970 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
CLN8-209ENST00000635970 KRTAP10-12P60413 245 aa5.96□□□□□ -1.46
CLN8-209ENST00000635970 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms