RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 DNAH10Q8IVF4 4471 aa1.57□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 K7EIL1 84 aa1.56□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 KRTAP12-2P59991 146 aa1.56□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 H0YAA0 97 aa1.56□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 SACSQ9NZJ4 4579 aa1.55□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 DEFB4AO15263 64 aa1.55□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 M0R2T5 61 aa1.55□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 KRTAP15-1Q3LI76 137 aa1.54□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 TPRXLQ17RH7 258 aa1.54□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 LCE2AQ5TA79 106 aaPredicted RBP1.54□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 U3KQA8 63 aa1.54□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 HSPG2P98160 4391 aa1.54□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 LCE2BO14633 110 aa1.53□□□□□ -2.16
KCNIP4-IT1-201ENST00000627566 KRTAP13-4Q3LI77 160 aa1.52□□□□□ -2.17
KCNIP4-IT1-201ENST00000627566 DNAH9Q9NYC9 4486 aa1.52□□□□□ -2.17
KCNIP4-IT1-201ENST00000627566 KRTAP13-2Q52LG2 175 aa1.5□□□□□ -2.17
KCNIP4-IT1-201ENST00000627566 KRTAP10-9P60411 292 aa1.5□□□□□ -2.17
KCNIP4-IT1-201ENST00000627566 MAPK1IP1LQ8NDC0 245 aa1.48□□□□□ -2.17
KCNIP4-IT1-201ENST00000627566 UBR4Q5T4S7 5183 aa1.46□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 SMR3AQ99954 134 aa1.46□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 DNAH11Q96DT5 4516 aa1.44□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 DNHD1Q96M86 4753 aa1.44□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 KRTAP3-3Q9BYR6 98 aa1.44□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 KRTAP3-2Q9BYR7 98 aa1.44□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 KIAA1109Q2LD37 5005 aa1.44□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 XP32Q5T750 250 aa1.43□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 STARD9Q9P2P6 4700 aa1.43□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 LCE2CQ5TA81 110 aa1.42□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 KRTAP13-1Q8IUC0 172 aa1.42□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 APOBP04114 4563 aaKnown RBP1.42□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 KRTAP10-8P60410 259 aa1.42□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 NEBP20929 6669 aa1.4□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.18
KCNIP4-IT1-201ENST00000627566 LRP1Q07954 4544 aaKnown RBP1.4□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 KRTAP1-5Q9BYS1 174 aa1.4□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 PLECQ15149 4684 aaKnown RBP1.39□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 KRTAP13-3Q3SY46 172 aa1.39□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 EPPK1P58107 5090 aaKnown RBP1.39□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 LRP2P98164 4655 aa1.39□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 FSIP2Q5CZC0 6907 aa1.39□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 MYCBP2O75592 4640 aa1.37□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 DNAH5Q8TE73 4624 aa1.36□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 HMCN2Q8NDA2 5059 aa1.35□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 LORP23490 312 aaPredicted RBP1.35□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 KRTAP3-1Q9BYR8 98 aa1.35□□□□□ -2.19
KCNIP4-IT1-201ENST00000627566 FAT1Q14517 4588 aa1.34□□□□□ -2.2
KCNIP4-IT1-201ENST00000627566 FAT4Q6V0I7 4981 aa1.31□□□□□ -2.2
KCNIP4-IT1-201ENST00000627566 KRTAP1-1Q07627 177 aa1.3□□□□□ -2.2
KCNIP4-IT1-201ENST00000627566 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
KCNIP4-IT1-201ENST00000627566 KRTAP1-3Q8IUG1 177 aa1.29□□□□□ -2.2
KCNIP4-IT1-201ENST00000627566 RNF213Q63HN8 5207 aa1.28□□□□□ -2.2
KCNIP4-IT1-201ENST00000627566 KRTAP7-1Q8IUC3 87 aa1.28□□□□□ -2.2
KCNIP4-IT1-201ENST00000627566 KRTAP9-9Q9BYP9 154 aa1.27□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 KRTAP9-4Q9BYQ2 154 aa1.27□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 KRTAP10-3P60369 221 aa1.25□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 KRTAP10-11P60412 298 aa1.25□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 KRTAP10-6P60371 365 aaPredicted RBP1.24□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 SMR3BP02814 79 aaPredicted RBP1.23□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
KCNIP4-IT1-201ENST00000627566 USH2AO75445 5202 aa1.21□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 KMT2DO14686 5537 aa1.2□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 KRTAP10-12P60413 245 aa1.2□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 KRTAP1-4P0C5Y4 121 aa1.2□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 KRTAP12-3P60328 96 aa1.2□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 SPRR5A0A1B0GTR4 108 aa1.18□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 KRTAP10-1P60331 282 aa1.18□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 MDN1Q9NU22 5596 aa1.17□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 KRTAP10-10P60014 251 aa1.16□□□□□ -2.22
KCNIP4-IT1-201ENST00000627566 MUC17Q685J3 4493 aa1.13□□□□□ -2.23
KCNIP4-IT1-201ENST00000627566 KRTAP10-2P60368 255 aa1.12□□□□□ -2.23
KCNIP4-IT1-201ENST00000627566 A0A1B0GVY2 172 aa1.12□□□□□ -2.23
KCNIP4-IT1-201ENST00000627566 KRTAP8-1Q8IUC2 63 aa1.1□□□□□ -2.23
KCNIP4-IT1-201ENST00000627566 LPAP08519 4548 aa1.08□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP10-7P60409 375 aaPredicted RBP1.07□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP10-5P60370 271 aa1.07□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 LCE3CQ5T5A8 94 aa1.07□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP19-2Q3LHN2 52 aa1.07□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP9-6A0A140TA67 174 aa1.05□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 LCE3AQ5TA76 89 aa1.04□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 FCGBPQ9Y6R7 5405 aaPredicted RBP1.04□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 SPRR2BP35325 72 aa1.04□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP10-4P60372 401 aaPredicted RBP1.04□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.03□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 SPRR2AP35326 72 aa1.03□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 LOC100996750A0A140TA64 210 aa1.03□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP4-6Q9BYQ5 205 aa1.03□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 KRTAP12-4P60329 112 aa1.03□□□□□ -2.24
KCNIP4-IT1-201ENST00000627566 MT1HL1P0DM35 61 aa1.02□□□□□ -2.25
KCNIP4-IT1-201ENST00000627566 SPRR2GQ9BYE4 73 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms