RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 MYT1Q01538 1121 aa5.38□□□□□ -1.55
KCNIP4-IT1-201ENST00000627566 CCDC180Q9P1Z9 1646 aa5.19□□□□□ -1.58
KCNIP4-IT1-201ENST00000627566 TTBK1Q5TCY1 1321 aaPredicted RBP5.11□□□□□ -1.59
KCNIP4-IT1-201ENST00000627566 PELP1Q8IZL8 1130 aaKnown RBP5.05□□□□□ -1.6
KCNIP4-IT1-201ENST00000627566 MYO15BQ96JP2 1530 aa4.9□□□□□ -1.62
KCNIP4-IT1-201ENST00000627566 EHMT2Q96KQ7 1210 aa4.85□□□□□ -1.63
KCNIP4-IT1-201ENST00000627566 RANGAP1P46060 587 aaPredicted RBP4.85□□□□□ -1.63
KCNIP4-IT1-201ENST00000627566 PRDM2Q13029 1718 aa4.84□□□□□ -1.63
KCNIP4-IT1-201ENST00000627566 YTHDC1Q96MU7 727 aaKnown RBP4.82□□□□□ -1.64
KCNIP4-IT1-201ENST00000627566 ERICH6Q7L0X2 663 aa4.82□□□□□ -1.64
KCNIP4-IT1-201ENST00000627566 DCAF1Q9Y4B6 1507 aa4.79□□□□□ -1.64
KCNIP4-IT1-201ENST00000627566 UNC13AQ9UPW8 1703 aa4.79□□□□□ -1.64
KCNIP4-IT1-201ENST00000627566 NISCHQ9Y2I1 1504 aa4.77□□□□□ -1.65
KCNIP4-IT1-201ENST00000627566 DCAF8L2P0C7V8 631 aa4.66□□□□□ -1.66
KCNIP4-IT1-201ENST00000627566 SLC24A1O60721 1099 aa4.63□□□□□ -1.67
KCNIP4-IT1-201ENST00000627566 CCER1Q8TC90 406 aaPredicted RBP4.58□□□□□ -1.68
KCNIP4-IT1-201ENST00000627566 SHROOM4Q9ULL8 1493 aa4.54□□□□□ -1.68
KCNIP4-IT1-201ENST00000627566 POLR3GLQ9BT43 218 aa4.49□□□□□ -1.69
KCNIP4-IT1-201ENST00000627566 HMGB1P09429 215 aaKnown RBP4.46□□□□□ -1.69
KCNIP4-IT1-201ENST00000627566 PEG3Q9GZU2 1588 aa4.46□□□□□ -1.7
KCNIP4-IT1-201ENST00000627566 GLIPR1L2Q4G1C9 344 aa4.45□□□□□ -1.7
KCNIP4-IT1-201ENST00000627566 AMER1Q5JTC6 1135 aaPredicted RBP4.4□□□□□ -1.7
KCNIP4-IT1-201ENST00000627566 MYT1LQ9UL68 1186 aa4.4□□□□□ -1.7
KCNIP4-IT1-201ENST00000627566 CLSPNQ9HAW4 1339 aa4.38□□□□□ -1.71
KCNIP4-IT1-201ENST00000627566 EIF4G1Q04637 1599 aaKnown RBP4.36□□□□□ -1.71
KCNIP4-IT1-201ENST00000627566 CNGB1Q14028 1251 aaPredicted RBP4.36□□□□□ -1.71
KCNIP4-IT1-201ENST00000627566 DAXXQ9UER7 740 aaPredicted RBP4.32□□□□□ -1.72
KCNIP4-IT1-201ENST00000627566 ZNF326Q5BKZ1 582 aaKnown RBP4.31□□□□□ -1.72
KCNIP4-IT1-201ENST00000627566 FAM9AQ8IZU1 332 aaPredicted RBP4.31□□□□□ -1.72
KCNIP4-IT1-201ENST00000627566 CENPBP07199 599 aaPredicted RBP4.29□□□□□ -1.72
KCNIP4-IT1-201ENST00000627566 NCLP19338 710 aaKnown RBP4.29□□□□□ -1.72
KCNIP4-IT1-201ENST00000627566 ATP1B4Q9UN42 357 aaPredicted RBP4.26□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 HMGB1P1B2RPK0 211 aaPredicted RBP4.25□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 HOMEZQ8IX15 550 aa4.24□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 ZEB1P37275 1124 aaPredicted RBP4.23□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 CDK11AQ9UQ88 783 aaPredicted RBP4.23□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 ARXQ96QS3 562 aa4.23□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 RTL5Q5HYW3 569 aaPredicted RBP4.22□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 PTMSP20962 102 aa4.22□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 ZCCHC6Q5VYS8 1495 aaKnown RBP4.22□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 WDR97A6NE52 1622 aa4.22□□□□□ -1.73
KCNIP4-IT1-201ENST00000627566 NEFLP07196 543 aa4.2□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 BCANQ96GW7 911 aa4.2□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 CHIC1Q5VXU3 224 aa4.19□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 POLR1AO95602 1720 aaPredicted RBP4.19□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 EIF5BO60841 1220 aaKnown RBP4.19□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 KIF21AQ7Z4S6 1674 aa4.19□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 ARID4BQ4LE39 1312 aaPredicted RBP4.17□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 NACADO15069 1562 aa4.16□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 SMARCA2P51531 1590 aa4.16□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 ABCC9O60706 1549 aa4.16□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 KAT6BQ8WYB5 2073 aa4.16□□□□□ -1.74
KCNIP4-IT1-201ENST00000627566 ANP32AP39687 249 aaKnown RBP4.14□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 BCL11AQ9H165 835 aa4.13□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 ANP32BQ92688 251 aaKnown RBP4.13□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 TRIM44Q96DX7 344 aaPredicted RBP4.13□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 CDK11BP21127 795 aaKnown RBP4.12□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 SUPT5HO00267 1087 aaKnown RBP4.12□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 TNNT2P45379 298 aaPredicted RBP4.12□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 NCBP3Q53F19 620 aaKnown RBP4.11□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 TULP1O00294 542 aaPredicted RBP4.1□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 LAS1LQ9Y4W2 734 aaKnown RBP4.09□□□□□ -1.75
KCNIP4-IT1-201ENST00000627566 SLC4A1APQ9BWU0 796 aaKnown RBP4.08□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 BAZ1BQ9UIG0 1483 aaKnown RBP4.08□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 CALRP27797 417 aaKnown RBP4.07□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 PPARGC1BQ86YN6 1023 aaKnown RBP4.06□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 NBR1Q14596 966 aa4.06□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.06□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 FBXO3Q9UK99 471 aa4.06□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 CEP152O94986 1710 aa4.06□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 ZBTB7CA1YPR0 619 aa4.05□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 TPRNQ4KMQ1 711 aa4.05□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 ARID3AQ99856 593 aa4.05□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 C14orf37Q86TY3 774 aa4.05□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 HAP1P54257 671 aaPredicted RBP4.04□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 BIVM-ERCC5R4GMW8 1640 aa4.04□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 BICRAQ9NZM4 1560 aa4.03□□□□□ -1.76
KCNIP4-IT1-201ENST00000627566 AK9Q5TCS8 1911 aa4.02□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 PLPPR3Q6T4P5 718 aa4.01□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 ANP32EQ9BTT0 268 aa4.01□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 BCORL1Q5H9F3 1711 aa4.01□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 BAZ1AQ9NRL2 1556 aaPredicted RBP3.99□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 HSP90B1P14625 803 aaKnown RBP3.98□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 CFAP65Q6ZU64 1925 aaKnown RBP3.98□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 HIRIP3Q9BW71 556 aaPredicted RBP3.97□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 PCGF6Q9BYE7 350 aa3.97□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 HMGXB3Q12766 1538 aa3.97□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 CCDC9Q9Y3X0 531 aaKnown RBP3.96□□□□□ -1.77
KCNIP4-IT1-201ENST00000627566 ZNF316A6NFI3 1004 aaPredicted RBP3.96□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 A0A0U1RQG5 324 aaPredicted RBP3.96□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 ERICH6BQ5W0A0 696 aa3.95□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 NEFMP07197 916 aa3.95□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 CCDC136Q96JN2 1154 aa3.95□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 NPM2Q86SE8 214 aaKnown RBP3.94□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 HRCP23327 699 aa3.94□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 PODXL2Q9NZ53 605 aa3.93□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 PPM1GO15355 546 aaPredicted RBP3.93□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 HSP90AA1P07900 732 aaKnown RBP3.93□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 PTMAP06454 111 aaKnown RBP3.93□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 USP35Q9P2H5 1018 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms