RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
PTP4A1-206ENST00000627002 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
PTP4A1-206ENST00000627002 C7orf65Q6ZTY9 151 aa4.03□□□□□ -1.76
PTP4A1-206ENST00000627002 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
PTP4A1-206ENST00000627002 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
PTP4A1-206ENST00000627002 PCOTHQ58A44 107 aa4.01□□□□□ -1.77
PTP4A1-206ENST00000627002 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
PTP4A1-206ENST00000627002 RNF213Q63HN8 5207 aa4□□□□□ -1.77
PTP4A1-206ENST00000627002 FAM236DA0A1B0GTK5 79 aa4□□□□□ -1.77
PTP4A1-206ENST00000627002 FAM236CP0DP71 79 aa4□□□□□ -1.77
PTP4A1-206ENST00000627002 LRP2P98164 4655 aa3.98□□□□□ -1.77
PTP4A1-206ENST00000627002 SPINK7P58062 85 aa3.98□□□□□ -1.77
PTP4A1-206ENST00000627002 HRES1P13985 223 aa3.97□□□□□ -1.77
PTP4A1-206ENST00000627002 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
PTP4A1-206ENST00000627002 SERP1Q9Y6X1 66 aa3.93□□□□□ -1.78
PTP4A1-206ENST00000627002 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
PTP4A1-206ENST00000627002 A8MUN3 132 aa3.91□□□□□ -1.78
PTP4A1-206ENST00000627002 ACYP2P14621 99 aa3.91□□□□□ -1.78
PTP4A1-206ENST00000627002 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
PTP4A1-206ENST00000627002 C4orf26Q17RF5 130 aa3.9□□□□□ -1.79
PTP4A1-206ENST00000627002 COX6B2Q6YFQ2 88 aa3.88□□□□□ -1.79
PTP4A1-206ENST00000627002 COA5Q86WW8 74 aa3.87□□□□□ -1.79
PTP4A1-206ENST00000627002 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
PTP4A1-206ENST00000627002 LPAP08519 4548 aa3.85□□□□□ -1.79
PTP4A1-206ENST00000627002 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
PTP4A1-206ENST00000627002 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
PTP4A1-206ENST00000627002 KRTAP4-1Q9BYQ7 146 aa3.82□□□□□ -1.8
PTP4A1-206ENST00000627002 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
PTP4A1-206ENST00000627002 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
PTP4A1-206ENST00000627002 SPTSSBQ8NFR3 76 aa3.81□□□□□ -1.8
PTP4A1-206ENST00000627002 MUC2Q02817 5179 aa3.78□□□□□ -1.8
PTP4A1-206ENST00000627002 S4R3F8 94 aa3.77□□□□□ -1.81
PTP4A1-206ENST00000627002 V9GYY9 64 aa3.77□□□□□ -1.81
PTP4A1-206ENST00000627002 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
PTP4A1-206ENST00000627002 Q1T7F1 81 aa3.74□□□□□ -1.81
PTP4A1-206ENST00000627002 LCA10Q71F78 164 aa3.74□□□□□ -1.81
PTP4A1-206ENST00000627002 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
PTP4A1-206ENST00000627002 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
PTP4A1-206ENST00000627002 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
PTP4A1-206ENST00000627002 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
PTP4A1-206ENST00000627002 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
PTP4A1-206ENST00000627002 CRCT1Q9UGL9 99 aa3.7□□□□□ -1.82
PTP4A1-206ENST00000627002 SEC61GP60059 68 aa3.69□□□□□ -1.82
PTP4A1-206ENST00000627002 CSAG1Q6PB30 78 aa3.69□□□□□ -1.82
PTP4A1-206ENST00000627002 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
PTP4A1-206ENST00000627002 A0A1B0GU69 56 aa3.67□□□□□ -1.82
PTP4A1-206ENST00000627002 PSPHP1O15172 72 aa3.66□□□□□ -1.82
PTP4A1-206ENST00000627002 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.82
PTP4A1-206ENST00000627002 H0YAA0 97 aa3.63□□□□□ -1.83
PTP4A1-206ENST00000627002 Q5VV11 94 aa3.63□□□□□ -1.83
PTP4A1-206ENST00000627002 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
PTP4A1-206ENST00000627002 MT1HP80294 61 aa3.58□□□□□ -1.84
PTP4A1-206ENST00000627002 A0A1B0GU33 70 aa3.57□□□□□ -1.84
PTP4A1-206ENST00000627002 A6NED7 52 aa3.57□□□□□ -1.84
PTP4A1-206ENST00000627002 M0R2T5 61 aa3.57□□□□□ -1.84
PTP4A1-206ENST00000627002 UQCR11O14957 56 aa3.57□□□□□ -1.84
PTP4A1-206ENST00000627002 KRTAP10-6P60371 365 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1-206ENST00000627002 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
PTP4A1-206ENST00000627002 P0C880 135 aa3.54□□□□□ -1.84
PTP4A1-206ENST00000627002 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
PTP4A1-206ENST00000627002 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
PTP4A1-206ENST00000627002 M0QZ58 72 aa3.5□□□□□ -1.85
PTP4A1-206ENST00000627002 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
PTP4A1-206ENST00000627002 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
PTP4A1-206ENST00000627002 CRIPTQ9P021 101 aa3.48□□□□□ -1.85
PTP4A1-206ENST00000627002 R4GN34 69 aa3.48□□□□□ -1.85
PTP4A1-206ENST00000627002 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
PTP4A1-206ENST00000627002 MT2AP02795 61 aa3.44□□□□□ -1.86
PTP4A1-206ENST00000627002 KRTAP10-10P60014 251 aa3.43□□□□□ -1.86
PTP4A1-206ENST00000627002 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
PTP4A1-206ENST00000627002 A0A0D9SG42 100 aa3.41□□□□□ -1.86
PTP4A1-206ENST00000627002 A8MU10 97 aa3.41□□□□□ -1.86
PTP4A1-206ENST00000627002 MT1FP04733 61 aa3.41□□□□□ -1.86
PTP4A1-206ENST00000627002 K7ERS5 55 aa3.4□□□□□ -1.87
PTP4A1-206ENST00000627002 LINC01554Q52M75 96 aa3.39□□□□□ -1.87
PTP4A1-206ENST00000627002 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
PTP4A1-206ENST00000627002 A6NN06 94 aa3.37□□□□□ -1.87
PTP4A1-206ENST00000627002 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
PTP4A1-206ENST00000627002 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
PTP4A1-206ENST00000627002 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
PTP4A1-206ENST00000627002 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
PTP4A1-206ENST00000627002 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
PTP4A1-206ENST00000627002 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
PTP4A1-206ENST00000627002 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
PTP4A1-206ENST00000627002 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
PTP4A1-206ENST00000627002 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
PTP4A1-206ENST00000627002 USH2AO75445 5202 aa3.24□□□□□ -1.89
PTP4A1-206ENST00000627002 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
PTP4A1-206ENST00000627002 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
PTP4A1-206ENST00000627002 MT1BP07438 61 aa3.22□□□□□ -1.89
PTP4A1-206ENST00000627002 ROMO1P60602 79 aa3.22□□□□□ -1.89
PTP4A1-206ENST00000627002 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
PTP4A1-206ENST00000627002 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
PTP4A1-206ENST00000627002 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
PTP4A1-206ENST00000627002 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
PTP4A1-206ENST00000627002 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.91
PTP4A1-206ENST00000627002 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
PTP4A1-206ENST00000627002 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
PTP4A1-206ENST00000627002 MT1XP80297 61 aa3.12□□□□□ -1.91
PTP4A1-206ENST00000627002 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms