RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 H7BZZ5 65 aa9.59□□□□□ -0.87
PDLIM2-221ENST00000622702 LCE2DQ5TA82 110 aaPredicted RBP9.57□□□□□ -0.88
PDLIM2-221ENST00000622702 LCA10Q71F78 164 aa9.57□□□□□ -0.88
PDLIM2-221ENST00000622702 ACYP2P14621 99 aa9.53□□□□□ -0.88
PDLIM2-221ENST00000622702 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
PDLIM2-221ENST00000622702 KRTAP9-8Q9BYQ0 159 aa9.51□□□□□ -0.89
PDLIM2-221ENST00000622702 CSAG1Q6PB30 78 aa9.48□□□□□ -0.89
PDLIM2-221ENST00000622702 MT2AP02795 61 aa9.41□□□□□ -0.9
PDLIM2-221ENST00000622702 FSIP2Q5CZC0 6907 aa9.36□□□□□ -0.91
PDLIM2-221ENST00000622702 CHKB-CPT1BH3BT56 60 aa9.34□□□□□ -0.91
PDLIM2-221ENST00000622702 MT1FP04733 61 aa9.34□□□□□ -0.91
PDLIM2-221ENST00000622702 ATP5EP56381 51 aaPredicted RBP9.34□□□□□ -0.91
PDLIM2-221ENST00000622702 PCP4P48539 62 aa9.33□□□□□ -0.92
PDLIM2-221ENST00000622702 TMEM258P61165 79 aa9.33□□□□□ -0.92
PDLIM2-221ENST00000622702 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
PDLIM2-221ENST00000622702 COA5Q86WW8 74 aa9.32□□□□□ -0.92
PDLIM2-221ENST00000622702 SPTSSBQ8NFR3 76 aa9.28□□□□□ -0.92
PDLIM2-221ENST00000622702 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
PDLIM2-221ENST00000622702 H0YAA0 97 aa9.24□□□□□ -0.93
PDLIM2-221ENST00000622702 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.93
PDLIM2-221ENST00000622702 KRTAP9-3Q9BYQ3 159 aa9.2□□□□□ -0.94
PDLIM2-221ENST00000622702 ADM2Q7Z4H4 148 aa9.12□□□□□ -0.95
PDLIM2-221ENST00000622702 USH2AO75445 5202 aa9.12□□□□□ -0.95
PDLIM2-221ENST00000622702 LCE2BO14633 110 aa9.09□□□□□ -0.95
PDLIM2-221ENST00000622702 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
PDLIM2-221ENST00000622702 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.96
PDLIM2-221ENST00000622702 P0C880 135 aa9.02□□□□□ -0.97
PDLIM2-221ENST00000622702 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
PDLIM2-221ENST00000622702 SSPOA2VEC9 5147 aa8.98□□□□□ -0.97
PDLIM2-221ENST00000622702 KRTAP19-1Q8IUB9 90 aa8.95□□□□□ -0.98
PDLIM2-221ENST00000622702 SPRR2GQ9BYE4 73 aa8.94□□□□□ -0.98
PDLIM2-221ENST00000622702 SEC61GP60059 68 aa8.9□□□□□ -0.98
PDLIM2-221ENST00000622702 R4GN34 69 aa8.85□□□□□ -0.99
PDLIM2-221ENST00000622702 A0A1B0GU69 56 aa8.82□□□□□ -1
PDLIM2-221ENST00000622702 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
PDLIM2-221ENST00000622702 RPS28P62857 69 aaKnown RBP8.81□□□□□ -1
PDLIM2-221ENST00000622702 M0QZ58 72 aa8.8□□□□□ -1
PDLIM2-221ENST00000622702 KRTAP19-8Q3LI54 63 aa8.78□□□□□ -1
PDLIM2-221ENST00000622702 PRR15LQ9BU68 103 aa8.74□□□□□ -1.01
PDLIM2-221ENST00000622702 FCGBPQ9Y6R7 5405 aaPredicted RBP8.72□□□□□ -1.01
PDLIM2-221ENST00000622702 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
PDLIM2-221ENST00000622702 KRTAP19-6Q3LI70 58 aa8.72□□□□□ -1.01
PDLIM2-221ENST00000622702 A0A1B0GU33 70 aa8.7□□□□□ -1.02
PDLIM2-221ENST00000622702 Q5VV11 94 aa8.7□□□□□ -1.02
PDLIM2-221ENST00000622702 MT1BP07438 61 aa8.69□□□□□ -1.02
PDLIM2-221ENST00000622702 V9GYY9 64 aa8.69□□□□□ -1.02
PDLIM2-221ENST00000622702 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
PDLIM2-221ENST00000622702 Q1T7F1 81 aa8.67□□□□□ -1.02
PDLIM2-221ENST00000622702 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
PDLIM2-221ENST00000622702 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
PDLIM2-221ENST00000622702 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
PDLIM2-221ENST00000622702 A6NN06 94 aa8.53□□□□□ -1.04
PDLIM2-221ENST00000622702 PSPHP1O15172 72 aa8.51□□□□□ -1.05
PDLIM2-221ENST00000622702 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
PDLIM2-221ENST00000622702 MACF1Q9UPN3 7388 aaKnown RBP8.49□□□□□ -1.05
PDLIM2-221ENST00000622702 UQCR11O14957 56 aa8.47□□□□□ -1.05
PDLIM2-221ENST00000622702 A0A0D9SG42 100 aa8.45□□□□□ -1.06
PDLIM2-221ENST00000622702 KRTAP10-5P60370 271 aa8.38□□□□□ -1.07
PDLIM2-221ENST00000622702 A8MU10 97 aa8.38□□□□□ -1.07
PDLIM2-221ENST00000622702 KRTAP9-7A8MTY7 169 aa8.37□□□□□ -1.07
PDLIM2-221ENST00000622702 SYNE2Q8WXH0 6885 aaKnown RBP8.34□□□□□ -1.07
PDLIM2-221ENST00000622702 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
PDLIM2-221ENST00000622702 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
PDLIM2-221ENST00000622702 MT1XP80297 61 aa8.29□□□□□ -1.08
PDLIM2-221ENST00000622702 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
PDLIM2-221ENST00000622702 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
PDLIM2-221ENST00000622702 A6NED7 52 aa8.26□□□□□ -1.09
PDLIM2-221ENST00000622702 KRTAP12-2P59991 146 aa8.26□□□□□ -1.09
PDLIM2-221ENST00000622702 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
PDLIM2-221ENST00000622702 KRTAP6-3Q3LI67 103 aa8.09□□□□□ -1.11
PDLIM2-221ENST00000622702 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
PDLIM2-221ENST00000622702 K7ERS5 55 aa8.05□□□□□ -1.12
PDLIM2-221ENST00000622702 KRTAP10-7P60409 375 aaPredicted RBP7.92□□□□□ -1.14
PDLIM2-221ENST00000622702 KMT2DO14686 5537 aa7.91□□□□□ -1.14
PDLIM2-221ENST00000622702 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
PDLIM2-221ENST00000622702 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
PDLIM2-221ENST00000622702 KRTAP5-9P26371 169 aa7.84□□□□□ -1.15
PDLIM2-221ENST00000622702 MUC12Q9UKN1 5478 aa7.82□□□□□ -1.16
PDLIM2-221ENST00000622702 BRK1Q8WUW1 75 aa7.81□□□□□ -1.16
PDLIM2-221ENST00000622702 NEBP20929 6669 aa7.76□□□□□ -1.17
PDLIM2-221ENST00000622702 TNP1P09430 55 aa7.76□□□□□ -1.17
PDLIM2-221ENST00000622702 KRTAP8-1Q8IUC2 63 aa7.76□□□□□ -1.17
PDLIM2-221ENST00000622702 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
PDLIM2-221ENST00000622702 KRTAP4-8Q9BYQ9 185 aa7.75□□□□□ -1.17
PDLIM2-221ENST00000622702 SPRR2FQ96RM1 72 aa7.7□□□□□ -1.18
PDLIM2-221ENST00000622702 MDN1Q9NU22 5596 aa7.65□□□□□ -1.18
PDLIM2-221ENST00000622702 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
PDLIM2-221ENST00000622702 ROMO1P60602 79 aa7.63□□□□□ -1.19
PDLIM2-221ENST00000622702 SPRR2EP22531 72 aa7.52□□□□□ -1.21
PDLIM2-221ENST00000622702 SPRR2BP35325 72 aa7.52□□□□□ -1.21
PDLIM2-221ENST00000622702 SPRR2AP35326 72 aa7.52□□□□□ -1.21
PDLIM2-221ENST00000622702 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
PDLIM2-221ENST00000622702 LCE1AQ5T7P2 110 aa7.45□□□□□ -1.22
PDLIM2-221ENST00000622702 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
PDLIM2-221ENST00000622702 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
PDLIM2-221ENST00000622702 PRO0628Q9UI54 55 aa7.41□□□□□ -1.22
PDLIM2-221ENST00000622702 PMAIP1Q13794 54 aa7.37□□□□□ -1.23
PDLIM2-221ENST00000622702 KRTAP20-1Q3LI63 56 aa7.36□□□□□ -1.23
PDLIM2-221ENST00000622702 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
PDLIM2-221ENST00000622702 MT1EP04732 61 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms