RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
PCGF3-213ENST00000620529 LCE2BO14633 110 aa8.43□□□□□ -1.06
PCGF3-213ENST00000620529 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
PCGF3-213ENST00000620529 KRTAP4-1Q9BYQ7 146 aa8.4□□□□□ -1.06
PCGF3-213ENST00000620529 SEC61GP60059 68 aa8.38□□□□□ -1.07
PCGF3-213ENST00000620529 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
PCGF3-213ENST00000620529 PMAIP1Q13794 54 aa8.32□□□□□ -1.08
PCGF3-213ENST00000620529 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
PCGF3-213ENST00000620529 S4R3F8 94 aa8.28□□□□□ -1.08
PCGF3-213ENST00000620529 LCA10Q71F78 164 aa8.23□□□□□ -1.09
PCGF3-213ENST00000620529 PSPHP1O15172 72 aa8.22□□□□□ -1.09
PCGF3-213ENST00000620529 Q5VV11 94 aa8.17□□□□□ -1.1
PCGF3-213ENST00000620529 LINC01558Q9Y6Z2 57 aa8.17□□□□□ -1.1
PCGF3-213ENST00000620529 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
PCGF3-213ENST00000620529 MUC2Q02817 5179 aa8.14□□□□□ -1.11
PCGF3-213ENST00000620529 UBR4Q5T4S7 5183 aa8.14□□□□□ -1.11
PCGF3-213ENST00000620529 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
PCGF3-213ENST00000620529 RNF213Q63HN8 5207 aa8.1□□□□□ -1.11
PCGF3-213ENST00000620529 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
PCGF3-213ENST00000620529 A0A1B0GU69 56 aa8.09□□□□□ -1.11
PCGF3-213ENST00000620529 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
PCGF3-213ENST00000620529 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
PCGF3-213ENST00000620529 A6NED7 52 aa8.01□□□□□ -1.13
PCGF3-213ENST00000620529 CDC42SE1Q9NRR8 79 aa8.01□□□□□ -1.13
PCGF3-213ENST00000620529 FLGP20930 4061 aaPredicted RBP7.96□□□□□ -1.13
PCGF3-213ENST00000620529 A6NN06 94 aa7.95□□□□□ -1.14
PCGF3-213ENST00000620529 A8MU10 97 aa7.92□□□□□ -1.14
PCGF3-213ENST00000620529 LCE2AQ5TA79 106 aaPredicted RBP7.92□□□□□ -1.14
PCGF3-213ENST00000620529 ADM2Q7Z4H4 148 aa7.89□□□□□ -1.15
PCGF3-213ENST00000620529 H0YAA0 97 aa7.89□□□□□ -1.15
PCGF3-213ENST00000620529 M0R2T5 61 aa7.87□□□□□ -1.15
PCGF3-213ENST00000620529 MT1HP80294 61 aa7.87□□□□□ -1.15
PCGF3-213ENST00000620529 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
PCGF3-213ENST00000620529 A0A1B0GU33 70 aa7.84□□□□□ -1.15
PCGF3-213ENST00000620529 UQCR11O14957 56 aa7.84□□□□□ -1.15
PCGF3-213ENST00000620529 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
PCGF3-213ENST00000620529 P0C880 135 aa7.82□□□□□ -1.16
PCGF3-213ENST00000620529 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
PCGF3-213ENST00000620529 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
PCGF3-213ENST00000620529 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
PCGF3-213ENST00000620529 M0QZ58 72 aa7.65□□□□□ -1.18
PCGF3-213ENST00000620529 R4GN34 69 aa7.65□□□□□ -1.18
PCGF3-213ENST00000620529 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
PCGF3-213ENST00000620529 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
PCGF3-213ENST00000620529 KRTAP9-8Q9BYQ0 159 aa7.55□□□□□ -1.2
PCGF3-213ENST00000620529 A0A0D9SG42 100 aa7.55□□□□□ -1.2
PCGF3-213ENST00000620529 MT2AP02795 61 aa7.54□□□□□ -1.2
PCGF3-213ENST00000620529 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
PCGF3-213ENST00000620529 LINC01554Q52M75 96 aa7.51□□□□□ -1.21
PCGF3-213ENST00000620529 MT1FP04733 61 aa7.5□□□□□ -1.21
PCGF3-213ENST00000620529 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
PCGF3-213ENST00000620529 K7ERS5 55 aa7.45□□□□□ -1.22
PCGF3-213ENST00000620529 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
PCGF3-213ENST00000620529 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
PCGF3-213ENST00000620529 H3BS24 57 aa7.37□□□□□ -1.23
PCGF3-213ENST00000620529 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
PCGF3-213ENST00000620529 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
PCGF3-213ENST00000620529 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
PCGF3-213ENST00000620529 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
PCGF3-213ENST00000620529 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
PCGF3-213ENST00000620529 KRTAP19-8Q3LI54 63 aa7.19□□□□□ -1.26
PCGF3-213ENST00000620529 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
PCGF3-213ENST00000620529 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
PCGF3-213ENST00000620529 MT1BP07438 61 aa7.09□□□□□ -1.28
PCGF3-213ENST00000620529 ROMO1P60602 79 aa7.08□□□□□ -1.28
PCGF3-213ENST00000620529 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
PCGF3-213ENST00000620529 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
PCGF3-213ENST00000620529 USH2AO75445 5202 aa6.86□□□□□ -1.31
PCGF3-213ENST00000620529 MT1XP80297 61 aa6.85□□□□□ -1.31
PCGF3-213ENST00000620529 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
PCGF3-213ENST00000620529 TNP1P09430 55 aa6.81□□□□□ -1.32
PCGF3-213ENST00000620529 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
PCGF3-213ENST00000620529 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
PCGF3-213ENST00000620529 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
PCGF3-213ENST00000620529 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
PCGF3-213ENST00000620529 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
PCGF3-213ENST00000620529 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
PCGF3-213ENST00000620529 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
PCGF3-213ENST00000620529 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
PCGF3-213ENST00000620529 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
PCGF3-213ENST00000620529 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
PCGF3-213ENST00000620529 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
PCGF3-213ENST00000620529 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
PCGF3-213ENST00000620529 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
PCGF3-213ENST00000620529 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
PCGF3-213ENST00000620529 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
PCGF3-213ENST00000620529 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
PCGF3-213ENST00000620529 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
PCGF3-213ENST00000620529 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
PCGF3-213ENST00000620529 KMT2DO14686 5537 aa6.27□□□□□ -1.41
PCGF3-213ENST00000620529 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
PCGF3-213ENST00000620529 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
PCGF3-213ENST00000620529 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
PCGF3-213ENST00000620529 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
PCGF3-213ENST00000620529 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
PCGF3-213ENST00000620529 LUZP6Q538Z0 58 aa6.02□□□□□ -1.44
PCGF3-213ENST00000620529 MT1EP04732 61 aa6.01□□□□□ -1.45
PCGF3-213ENST00000620529 A0A0A0MQY5 61 aa5.96□□□□□ -1.45
PCGF3-213ENST00000620529 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
PCGF3-213ENST00000620529 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms