RNA–Protein interactions for RNA: ENST00000620494.1

LINC02340-202, Transcript of long intergenic non-protein coding RNA 2340, humanhuman

TSL 4 BASIC

Gene LINC02340, Length 573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02340-202ENST00000620494 LCA10Q71F78 164 aa6.34□□□□□ -1.39
LINC02340-202ENST00000620494 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.39
LINC02340-202ENST00000620494 ATP5EP56381 51 aaPredicted RBP6.33□□□□□ -1.4
LINC02340-202ENST00000620494 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
LINC02340-202ENST00000620494 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
LINC02340-202ENST00000620494 TMEM258P61165 79 aa6.3□□□□□ -1.4
LINC02340-202ENST00000620494 PCP4P48539 62 aa6.28□□□□□ -1.4
LINC02340-202ENST00000620494 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
LINC02340-202ENST00000620494 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
LINC02340-202ENST00000620494 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
LINC02340-202ENST00000620494 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
LINC02340-202ENST00000620494 COA5Q86WW8 74 aa6.22□□□□□ -1.41
LINC02340-202ENST00000620494 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
LINC02340-202ENST00000620494 H0YAA0 97 aa6.16□□□□□ -1.42
LINC02340-202ENST00000620494 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
LINC02340-202ENST00000620494 MT2AP02795 61 aa6.12□□□□□ -1.43
LINC02340-202ENST00000620494 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
LINC02340-202ENST00000620494 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
LINC02340-202ENST00000620494 SERP1Q9Y6X1 66 aa6.08□□□□□ -1.44
LINC02340-202ENST00000620494 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
LINC02340-202ENST00000620494 MT1FP04733 61 aa6.06□□□□□ -1.44
LINC02340-202ENST00000620494 SEC61GP60059 68 aa6.05□□□□□ -1.44
LINC02340-202ENST00000620494 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
LINC02340-202ENST00000620494 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
LINC02340-202ENST00000620494 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
LINC02340-202ENST00000620494 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
LINC02340-202ENST00000620494 A0A1B0GU69 56 aa5.94□□□□□ -1.46
LINC02340-202ENST00000620494 P0C880 135 aa5.94□□□□□ -1.46
LINC02340-202ENST00000620494 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
LINC02340-202ENST00000620494 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
LINC02340-202ENST00000620494 R4GN34 69 aa5.93□□□□□ -1.46
LINC02340-202ENST00000620494 V9GYY9 64 aa5.92□□□□□ -1.46
LINC02340-202ENST00000620494 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.46
LINC02340-202ENST00000620494 SMIM26A0A096LP01 95 aa5.89□□□□□ -1.47
LINC02340-202ENST00000620494 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
LINC02340-202ENST00000620494 M0QZ58 72 aa5.88□□□□□ -1.47
LINC02340-202ENST00000620494 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
LINC02340-202ENST00000620494 A0A1B0GU33 70 aa5.84□□□□□ -1.47
LINC02340-202ENST00000620494 LCE2BO14633 110 aa5.84□□□□□ -1.47
LINC02340-202ENST00000620494 Q1T7F1 81 aa5.83□□□□□ -1.48
LINC02340-202ENST00000620494 Q5VV11 94 aa5.81□□□□□ -1.48
LINC02340-202ENST00000620494 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
LINC02340-202ENST00000620494 USH2AO75445 5202 aa5.75□□□□□ -1.49
LINC02340-202ENST00000620494 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
LINC02340-202ENST00000620494 UQCR11O14957 56 aa5.72□□□□□ -1.49
LINC02340-202ENST00000620494 A6NN06 94 aa5.71□□□□□ -1.5
LINC02340-202ENST00000620494 PSPHP1O15172 72 aa5.71□□□□□ -1.5
LINC02340-202ENST00000620494 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
LINC02340-202ENST00000620494 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
LINC02340-202ENST00000620494 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
LINC02340-202ENST00000620494 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
LINC02340-202ENST00000620494 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
LINC02340-202ENST00000620494 MT1BP07438 61 aa5.66□□□□□ -1.5
LINC02340-202ENST00000620494 A0A0D9SG42 100 aa5.63□□□□□ -1.51
LINC02340-202ENST00000620494 A6NED7 52 aa5.6□□□□□ -1.51
LINC02340-202ENST00000620494 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
LINC02340-202ENST00000620494 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
LINC02340-202ENST00000620494 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
LINC02340-202ENST00000620494 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.52
LINC02340-202ENST00000620494 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
LINC02340-202ENST00000620494 A8MU10 97 aa5.55□□□□□ -1.52
LINC02340-202ENST00000620494 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
LINC02340-202ENST00000620494 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
LINC02340-202ENST00000620494 K7ERS5 55 aa5.51□□□□□ -1.53
LINC02340-202ENST00000620494 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
LINC02340-202ENST00000620494 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
LINC02340-202ENST00000620494 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
LINC02340-202ENST00000620494 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
LINC02340-202ENST00000620494 MT1XP80297 61 aa5.43□□□□□ -1.54
LINC02340-202ENST00000620494 MACF1Q9UPN3 7388 aaKnown RBP5.33□□□□□ -1.56
LINC02340-202ENST00000620494 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
LINC02340-202ENST00000620494 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
LINC02340-202ENST00000620494 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
LINC02340-202ENST00000620494 TNP1P09430 55 aa5.21□□□□□ -1.58
LINC02340-202ENST00000620494 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
LINC02340-202ENST00000620494 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
LINC02340-202ENST00000620494 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
LINC02340-202ENST00000620494 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
LINC02340-202ENST00000620494 ROMO1P60602 79 aa5.14□□□□□ -1.59
LINC02340-202ENST00000620494 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
LINC02340-202ENST00000620494 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
LINC02340-202ENST00000620494 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
LINC02340-202ENST00000620494 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
LINC02340-202ENST00000620494 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
LINC02340-202ENST00000620494 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
LINC02340-202ENST00000620494 KMT2DO14686 5537 aa5.01□□□□□ -1.61
LINC02340-202ENST00000620494 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
LINC02340-202ENST00000620494 MUC12Q9UKN1 5478 aa4.95□□□□□ -1.62
LINC02340-202ENST00000620494 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
LINC02340-202ENST00000620494 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
LINC02340-202ENST00000620494 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
LINC02340-202ENST00000620494 NEBP20929 6669 aa4.93□□□□□ -1.62
LINC02340-202ENST00000620494 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
LINC02340-202ENST00000620494 SPRR2EP22531 72 aa4.87□□□□□ -1.63
LINC02340-202ENST00000620494 SPRR2BP35325 72 aa4.87□□□□□ -1.63
LINC02340-202ENST00000620494 SPRR2AP35326 72 aa4.87□□□□□ -1.63
LINC02340-202ENST00000620494 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
LINC02340-202ENST00000620494 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
LINC02340-202ENST00000620494 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
LINC02340-202ENST00000620494 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms