RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 IGKV2D-30A0A075B6S6 120 aa4.16□□□□□ -1.74
CPNE3-209ENST00000620393 C7orf65Q6ZTY9 151 aa4.16□□□□□ -1.74
CPNE3-209ENST00000620393 CYP4F30PQ9H0H9 118 aa4.16□□□□□ -1.74
CPNE3-209ENST00000620393 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
CPNE3-209ENST00000620393 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
CPNE3-209ENST00000620393 HRES1P13985 223 aa4.12□□□□□ -1.75
CPNE3-209ENST00000620393 SNURFQ9Y675 71 aa4.11□□□□□ -1.75
CPNE3-209ENST00000620393 KLKP1Q107X0 134 aa4.1□□□□□ -1.75
CPNE3-209ENST00000620393 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
CPNE3-209ENST00000620393 CCDC179H3BU77 68 aa4.09□□□□□ -1.75
CPNE3-209ENST00000620393 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
CPNE3-209ENST00000620393 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
CPNE3-209ENST00000620393 C4orf26Q17RF5 130 aa4.07□□□□□ -1.76
CPNE3-209ENST00000620393 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
CPNE3-209ENST00000620393 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
CPNE3-209ENST00000620393 MUC2Q02817 5179 aa4.06□□□□□ -1.76
CPNE3-209ENST00000620393 NDUFC1O43677 76 aa4.06□□□□□ -1.76
CPNE3-209ENST00000620393 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
CPNE3-209ENST00000620393 PCP4P48539 62 aa4.04□□□□□ -1.76
CPNE3-209ENST00000620393 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
CPNE3-209ENST00000620393 CYSTM1Q9H1C7 97 aa4.04□□□□□ -1.76
CPNE3-209ENST00000620393 H7BZZ5 65 aa4.03□□□□□ -1.76
CPNE3-209ENST00000620393 FAM236DA0A1B0GTK5 79 aa4.02□□□□□ -1.77
CPNE3-209ENST00000620393 FAM236CP0DP71 79 aa4.02□□□□□ -1.77
CPNE3-209ENST00000620393 SPANXA2-OT1Q8N9U9 137 aa4.02□□□□□ -1.77
CPNE3-209ENST00000620393 A8MUN3 132 aa4□□□□□ -1.77
CPNE3-209ENST00000620393 H1FX-AS1Q4G0G2 97 aa4□□□□□ -1.77
CPNE3-209ENST00000620393 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
CPNE3-209ENST00000620393 ACYP2P14621 99 aa3.96□□□□□ -1.78
CPNE3-209ENST00000620393 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
CPNE3-209ENST00000620393 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
CPNE3-209ENST00000620393 TMEM258P61165 79 aa3.94□□□□□ -1.78
CPNE3-209ENST00000620393 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
CPNE3-209ENST00000620393 MT1HP80294 61 aa3.92□□□□□ -1.78
CPNE3-209ENST00000620393 S4R3F8 94 aa3.92□□□□□ -1.78
CPNE3-209ENST00000620393 LCA10Q71F78 164 aa3.9□□□□□ -1.79
CPNE3-209ENST00000620393 CSAG1Q6PB30 78 aa3.88□□□□□ -1.79
CPNE3-209ENST00000620393 COA5Q86WW8 74 aa3.88□□□□□ -1.79
CPNE3-209ENST00000620393 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
CPNE3-209ENST00000620393 M0R2T5 61 aa3.87□□□□□ -1.79
CPNE3-209ENST00000620393 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.79
CPNE3-209ENST00000620393 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
CPNE3-209ENST00000620393 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
CPNE3-209ENST00000620393 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
CPNE3-209ENST00000620393 H0YAA0 97 aa3.77□□□□□ -1.81
CPNE3-209ENST00000620393 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
CPNE3-209ENST00000620393 MT2AP02795 61 aa3.74□□□□□ -1.81
CPNE3-209ENST00000620393 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
CPNE3-209ENST00000620393 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
CPNE3-209ENST00000620393 MT1FP04733 61 aa3.71□□□□□ -1.82
CPNE3-209ENST00000620393 KRTAP10-10P60014 251 aa3.71□□□□□ -1.82
CPNE3-209ENST00000620393 LINC01558Q9Y6Z2 57 aa3.71□□□□□ -1.82
CPNE3-209ENST00000620393 SEC61GP60059 68 aa3.7□□□□□ -1.82
CPNE3-209ENST00000620393 P0C880 135 aa3.69□□□□□ -1.82
CPNE3-209ENST00000620393 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
CPNE3-209ENST00000620393 A0A1B0GU69 56 aa3.68□□□□□ -1.82
CPNE3-209ENST00000620393 V9GYY9 64 aa3.68□□□□□ -1.82
CPNE3-209ENST00000620393 Q1T7F1 81 aa3.67□□□□□ -1.82
CPNE3-209ENST00000620393 CRIPTQ9P021 101 aa3.66□□□□□ -1.82
CPNE3-209ENST00000620393 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
CPNE3-209ENST00000620393 A0A1B0GU33 70 aa3.62□□□□□ -1.83
CPNE3-209ENST00000620393 M0QZ58 72 aa3.61□□□□□ -1.83
CPNE3-209ENST00000620393 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-209ENST00000620393 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
CPNE3-209ENST00000620393 R4GN34 69 aa3.61□□□□□ -1.83
CPNE3-209ENST00000620393 PSPHP1O15172 72 aa3.6□□□□□ -1.83
CPNE3-209ENST00000620393 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
CPNE3-209ENST00000620393 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
CPNE3-209ENST00000620393 Q5VV11 94 aa3.57□□□□□ -1.84
CPNE3-209ENST00000620393 UQCR11O14957 56 aa3.55□□□□□ -1.84
CPNE3-209ENST00000620393 SPATA8Q6RVD6 105 aa3.55□□□□□ -1.84
CPNE3-209ENST00000620393 KRTAP19-8Q3LI54 63 aa3.54□□□□□ -1.84
CPNE3-209ENST00000620393 LINC01554Q52M75 96 aa3.52□□□□□ -1.85
CPNE3-209ENST00000620393 MIR22HGQ0VDD5 57 aa3.5□□□□□ -1.85
CPNE3-209ENST00000620393 A0A0D9SG42 100 aa3.49□□□□□ -1.85
CPNE3-209ENST00000620393 A6NN06 94 aa3.49□□□□□ -1.85
CPNE3-209ENST00000620393 MT1BP07438 61 aa3.49□□□□□ -1.85
CPNE3-209ENST00000620393 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
CPNE3-209ENST00000620393 A6NED7 52 aa3.48□□□□□ -1.85
CPNE3-209ENST00000620393 A8MU10 97 aa3.47□□□□□ -1.85
CPNE3-209ENST00000620393 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
CPNE3-209ENST00000620393 PLAC4Q8WY50 150 aa3.46□□□□□ -1.86
CPNE3-209ENST00000620393 USH2AO75445 5202 aa3.44□□□□□ -1.86
CPNE3-209ENST00000620393 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
CPNE3-209ENST00000620393 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
CPNE3-209ENST00000620393 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
CPNE3-209ENST00000620393 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
CPNE3-209ENST00000620393 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
CPNE3-209ENST00000620393 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
CPNE3-209ENST00000620393 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
CPNE3-209ENST00000620393 K7ERS5 55 aa3.36□□□□□ -1.87
CPNE3-209ENST00000620393 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
CPNE3-209ENST00000620393 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
CPNE3-209ENST00000620393 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
CPNE3-209ENST00000620393 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
CPNE3-209ENST00000620393 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.87
CPNE3-209ENST00000620393 MT1XP80297 61 aa3.34□□□□□ -1.87
CPNE3-209ENST00000620393 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
CPNE3-209ENST00000620393 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
CPNE3-209ENST00000620393 MT3P25713 68 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms