RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
PSMC3-213ENST00000619920 A0A1B0GU69 56 aa7.71□□□□□ -1.18
PSMC3-213ENST00000619920 S4R3F8 94 aa7.68□□□□□ -1.18
PSMC3-213ENST00000619920 HMCN2Q8NDA2 5059 aa7.68□□□□□ -1.18
PSMC3-213ENST00000619920 HERC1Q15751 4861 aa7.67□□□□□ -1.18
PSMC3-213ENST00000619920 LCA10Q71F78 164 aa7.66□□□□□ -1.18
PSMC3-213ENST00000619920 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
PSMC3-213ENST00000619920 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
PSMC3-213ENST00000619920 SEC61GP60059 68 aa7.64□□□□□ -1.19
PSMC3-213ENST00000619920 A6NED7 52 aa7.61□□□□□ -1.19
PSMC3-213ENST00000619920 BRK1Q8WUW1 75 aa7.61□□□□□ -1.19
PSMC3-213ENST00000619920 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
PSMC3-213ENST00000619920 UQCR11O14957 56 aa7.51□□□□□ -1.21
PSMC3-213ENST00000619920 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
PSMC3-213ENST00000619920 CDC42SE1Q9NRR8 79 aa7.5□□□□□ -1.21
PSMC3-213ENST00000619920 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
PSMC3-213ENST00000619920 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
PSMC3-213ENST00000619920 A0A1B0GU33 70 aa7.44□□□□□ -1.22
PSMC3-213ENST00000619920 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
PSMC3-213ENST00000619920 A8MU10 97 aa7.42□□□□□ -1.22
PSMC3-213ENST00000619920 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
PSMC3-213ENST00000619920 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
PSMC3-213ENST00000619920 H0YAA0 97 aa7.38□□□□□ -1.23
PSMC3-213ENST00000619920 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
PSMC3-213ENST00000619920 FLGP20930 4061 aaPredicted RBP7.34□□□□□ -1.24
PSMC3-213ENST00000619920 MUC2Q02817 5179 aa7.32□□□□□ -1.24
PSMC3-213ENST00000619920 P0C880 135 aa7.32□□□□□ -1.24
PSMC3-213ENST00000619920 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
PSMC3-213ENST00000619920 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
PSMC3-213ENST00000619920 UBR4Q5T4S7 5183 aa7.25□□□□□ -1.25
PSMC3-213ENST00000619920 PMAIP1Q13794 54 aa7.21□□□□□ -1.25
PSMC3-213ENST00000619920 KRTAP13-4Q3LI77 160 aa7.2□□□□□ -1.26
PSMC3-213ENST00000619920 M0QZ58 72 aa7.2□□□□□ -1.26
PSMC3-213ENST00000619920 A6NN06 94 aa7.16□□□□□ -1.26
PSMC3-213ENST00000619920 MT1HP80294 61 aa7.1□□□□□ -1.27
PSMC3-213ENST00000619920 K7ERS5 55 aa7.09□□□□□ -1.27
PSMC3-213ENST00000619920 A0A0D9SG42 100 aa7.08□□□□□ -1.28
PSMC3-213ENST00000619920 R4GN34 69 aa7.08□□□□□ -1.28
PSMC3-213ENST00000619920 M0R2T5 61 aa7.05□□□□□ -1.28
PSMC3-213ENST00000619920 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
PSMC3-213ENST00000619920 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
PSMC3-213ENST00000619920 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
PSMC3-213ENST00000619920 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
PSMC3-213ENST00000619920 KTN1-AS1Q86SY8 53 aa6.95□□□□□ -1.3
PSMC3-213ENST00000619920 KRTAP12-2P59991 146 aa6.94□□□□□ -1.3
PSMC3-213ENST00000619920 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
PSMC3-213ENST00000619920 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
PSMC3-213ENST00000619920 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
PSMC3-213ENST00000619920 MT2AP02795 61 aa6.86□□□□□ -1.31
PSMC3-213ENST00000619920 MT1FP04733 61 aa6.82□□□□□ -1.32
PSMC3-213ENST00000619920 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
PSMC3-213ENST00000619920 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
PSMC3-213ENST00000619920 ROMO1P60602 79 aa6.81□□□□□ -1.32
PSMC3-213ENST00000619920 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
PSMC3-213ENST00000619920 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
PSMC3-213ENST00000619920 PRAC1Q96KF2 57 aa6.71□□□□□ -1.34
PSMC3-213ENST00000619920 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
PSMC3-213ENST00000619920 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
PSMC3-213ENST00000619920 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
PSMC3-213ENST00000619920 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
PSMC3-213ENST00000619920 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
PSMC3-213ENST00000619920 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
PSMC3-213ENST00000619920 MT1BP07438 61 aa6.49□□□□□ -1.37
PSMC3-213ENST00000619920 LCE2BO14633 110 aa6.4□□□□□ -1.39
PSMC3-213ENST00000619920 TNP1P09430 55 aa6.37□□□□□ -1.39
PSMC3-213ENST00000619920 MT1XP80297 61 aa6.31□□□□□ -1.4
PSMC3-213ENST00000619920 KRTAP10-5P60370 271 aa6.31□□□□□ -1.4
PSMC3-213ENST00000619920 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
PSMC3-213ENST00000619920 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
PSMC3-213ENST00000619920 PRO2289Q9P1D8 64 aa6.26□□□□□ -1.41
PSMC3-213ENST00000619920 USH2AO75445 5202 aa6.2□□□□□ -1.42
PSMC3-213ENST00000619920 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
PSMC3-213ENST00000619920 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
PSMC3-213ENST00000619920 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
PSMC3-213ENST00000619920 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
PSMC3-213ENST00000619920 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
PSMC3-213ENST00000619920 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
PSMC3-213ENST00000619920 KRTAP19-6Q3LI70 58 aa6□□□□□ -1.45
PSMC3-213ENST00000619920 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
PSMC3-213ENST00000619920 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
PSMC3-213ENST00000619920 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
PSMC3-213ENST00000619920 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.48
PSMC3-213ENST00000619920 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
PSMC3-213ENST00000619920 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
PSMC3-213ENST00000619920 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
PSMC3-213ENST00000619920 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
PSMC3-213ENST00000619920 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
PSMC3-213ENST00000619920 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
PSMC3-213ENST00000619920 KMT2DO14686 5537 aa5.67□□□□□ -1.5
PSMC3-213ENST00000619920 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
PSMC3-213ENST00000619920 H3BS24 57 aa5.62□□□□□ -1.51
PSMC3-213ENST00000619920 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
PSMC3-213ENST00000619920 MT1EP04732 61 aa5.53□□□□□ -1.52
PSMC3-213ENST00000619920 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
PSMC3-213ENST00000619920 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
PSMC3-213ENST00000619920 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
PSMC3-213ENST00000619920 MT1LQ93083 61 aa5.43□□□□□ -1.54
PSMC3-213ENST00000619920 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
PSMC3-213ENST00000619920 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
PSMC3-213ENST00000619920 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms