RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 C1orf64Q8NEQ6 169 aa12.14□□□□□ -0.47
PMS1-220ENST00000618056 MT1FP04733 61 aa12.05□□□□□ -0.48
PMS1-220ENST00000618056 H1FX-AS1Q4G0G2 97 aa12.04□□□□□ -0.48
PMS1-220ENST00000618056 LOC101927531A0A1B0GV80 90 aa12.02□□□□□ -0.49
PMS1-220ENST00000618056 KRTAP10-10P60014 251 aa11.99□□□□□ -0.49
PMS1-220ENST00000618056 RPS28P62857 69 aaKnown RBP11.95□□□□□ -0.5
PMS1-220ENST00000618056 SERP1Q9Y6X1 66 aa11.95□□□□□ -0.5
PMS1-220ENST00000618056 SPANXA2-OT1Q8N9U9 137 aa11.94□□□□□ -0.5
PMS1-220ENST00000618056 USH2AO75445 5202 aa11.93□□□□□ -0.5
PMS1-220ENST00000618056 C4orf26Q17RF5 130 aa11.93□□□□□ -0.5
PMS1-220ENST00000618056 KRTAP9-3Q9BYQ3 159 aa11.92□□□□□ -0.5
PMS1-220ENST00000618056 CYP4F30PQ9H0H9 118 aa11.89□□□□□ -0.51
PMS1-220ENST00000618056 LCE2BO14633 110 aa11.82□□□□□ -0.52
PMS1-220ENST00000618056 SSPOA2VEC9 5147 aa11.8□□□□□ -0.52
PMS1-220ENST00000618056 KRTAP3-1Q9BYR8 98 aa11.78□□□□□ -0.52
PMS1-220ENST00000618056 S4R3F8 94 aa11.65□□□□□ -0.54
PMS1-220ENST00000618056 SMIM26A0A096LP01 95 aa11.64□□□□□ -0.55
PMS1-220ENST00000618056 COA5Q86WW8 74 aa11.6□□□□□ -0.55
PMS1-220ENST00000618056 LCA10Q71F78 164 aa11.58□□□□□ -0.56
PMS1-220ENST00000618056 DMAC1Q96GE9 116 aa11.57□□□□□ -0.56
PMS1-220ENST00000618056 CSAG1Q6PB30 78 aa11.56□□□□□ -0.56
PMS1-220ENST00000618056 ACYP2P14621 99 aa11.53□□□□□ -0.56
PMS1-220ENST00000618056 KRTAP19-1Q8IUB9 90 aa11.53□□□□□ -0.56
PMS1-220ENST00000618056 FCGBPQ9Y6R7 5405 aaPredicted RBP11.51□□□□□ -0.57
PMS1-220ENST00000618056 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
PMS1-220ENST00000618056 A8MUN3 132 aa11.42□□□□□ -0.58
PMS1-220ENST00000618056 CHKB-CPT1BH3BT56 60 aa11.4□□□□□ -0.58
PMS1-220ENST00000618056 KRTAP19-6Q3LI70 58 aa11.39□□□□□ -0.59
PMS1-220ENST00000618056 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.38□□□□□ -0.59
PMS1-220ENST00000618056 Q1T7F1 81 aa11.36□□□□□ -0.59
PMS1-220ENST00000618056 V9GYY9 64 aa11.36□□□□□ -0.59
PMS1-220ENST00000618056 SPRR2GQ9BYE4 73 aa11.25□□□□□ -0.61
PMS1-220ENST00000618056 LINC01558Q9Y6Z2 57 aa11.19□□□□□ -0.62
PMS1-220ENST00000618056 KRTAP9-7A8MTY7 169 aa11.18□□□□□ -0.62
PMS1-220ENST00000618056 KRTAP3-2Q9BYR7 98 aa11.16□□□□□ -0.62
PMS1-220ENST00000618056 PSPHP1O15172 72 aa11.15□□□□□ -0.62
PMS1-220ENST00000618056 KRTAP19-8Q3LI54 63 aa11.15□□□□□ -0.62
PMS1-220ENST00000618056 PRR15LQ9BU68 103 aa11.15□□□□□ -0.62
PMS1-220ENST00000618056 H0YAA0 97 aa11.14□□□□□ -0.63
PMS1-220ENST00000618056 SPTSSBQ8NFR3 76 aa11.14□□□□□ -0.63
PMS1-220ENST00000618056 CRIPTQ9P021 101 aa11.12□□□□□ -0.63
PMS1-220ENST00000618056 MACF1Q9UPN3 7388 aaKnown RBP11.12□□□□□ -0.63
PMS1-220ENST00000618056 MT1BP07438 61 aa11.11□□□□□ -0.63
PMS1-220ENST00000618056 Q5VV11 94 aa11.11□□□□□ -0.63
PMS1-220ENST00000618056 SYNE2Q8WXH0 6885 aaKnown RBP10.98□□□□□ -0.65
PMS1-220ENST00000618056 A0A1B0GU69 56 aa10.97□□□□□ -0.65
PMS1-220ENST00000618056 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.65
PMS1-220ENST00000618056 A6NN06 94 aa10.9□□□□□ -0.66
PMS1-220ENST00000618056 SEC61GP60059 68 aa10.87□□□□□ -0.67
PMS1-220ENST00000618056 BRK1Q8WUW1 75 aa10.87□□□□□ -0.67
PMS1-220ENST00000618056 A6NED7 52 aa10.84□□□□□ -0.67
PMS1-220ENST00000618056 KRTAP10-5P60370 271 aa10.83□□□□□ -0.68
PMS1-220ENST00000618056 P0C880 135 aa10.75□□□□□ -0.69
PMS1-220ENST00000618056 KRTAP6-3Q3LI67 103 aa10.71□□□□□ -0.69
PMS1-220ENST00000618056 PRO0628Q9UI54 55 aa10.71□□□□□ -0.69
PMS1-220ENST00000618056 R4GN34 69 aa10.69□□□□□ -0.7
PMS1-220ENST00000618056 CDC42SE1Q9NRR8 79 aa10.68□□□□□ -0.7
PMS1-220ENST00000618056 UQCR11O14957 56 aa10.66□□□□□ -0.7
PMS1-220ENST00000618056 M0QZ58 72 aa10.6□□□□□ -0.71
PMS1-220ENST00000618056 A8MU10 97 aa10.56□□□□□ -0.72
PMS1-220ENST00000618056 MIR22HGQ0VDD5 57 aa10.56□□□□□ -0.72
PMS1-220ENST00000618056 A0A1B0GU33 70 aa10.55□□□□□ -0.72
PMS1-220ENST00000618056 PLAC4Q8WY50 150 aa10.55□□□□□ -0.72
PMS1-220ENST00000618056 SPATA8Q6RVD6 105 aa10.54□□□□□ -0.72
PMS1-220ENST00000618056 PRO2289Q9P1D8 64 aa10.49□□□□□ -0.73
PMS1-220ENST00000618056 MT1XP80297 61 aa10.47□□□□□ -0.73
PMS1-220ENST00000618056 LINC01554Q52M75 96 aa10.41□□□□□ -0.74
PMS1-220ENST00000618056 MUC12Q9UKN1 5478 aa10.34□□□□□ -0.75
PMS1-220ENST00000618056 KRTAP5-9P26371 169 aa10.32□□□□□ -0.76
PMS1-220ENST00000618056 NEBP20929 6669 aa10.31□□□□□ -0.76
PMS1-220ENST00000618056 PMAIP1Q13794 54 aa10.24□□□□□ -0.77
PMS1-220ENST00000618056 KMT2DO14686 5537 aa10.24□□□□□ -0.77
PMS1-220ENST00000618056 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
PMS1-220ENST00000618056 SVIPQ8NHG7 77 aa10.22□□□□□ -0.77
PMS1-220ENST00000618056 KRTAP12-2P59991 146 aa10.21□□□□□ -0.78
PMS1-220ENST00000618056 A0A0D9SG42 100 aa10.11□□□□□ -0.79
PMS1-220ENST00000618056 MDN1Q9NU22 5596 aa10.1□□□□□ -0.79
PMS1-220ENST00000618056 K7ERS5 55 aa10.1□□□□□ -0.79
PMS1-220ENST00000618056 KRTAP8-1Q8IUC2 63 aa10.02□□□□□ -0.81
PMS1-220ENST00000618056 SPRR2FQ96RM1 72 aa10□□□□□ -0.81
PMS1-220ENST00000618056 KRTAP10-7P60409 375 aaPredicted RBP9.97□□□□□ -0.81
PMS1-220ENST00000618056 KRTAP10-12P60413 245 aa9.96□□□□□ -0.82
PMS1-220ENST00000618056 KRTAP4-8A0A0G2JLE6 195 aa9.93□□□□□ -0.82
PMS1-220ENST00000618056 KRTAP4-8Q9BYQ9 185 aa9.93□□□□□ -0.82
PMS1-220ENST00000618056 KTN1-AS1Q86SY8 53 aa9.91□□□□□ -0.82
PMS1-220ENST00000618056 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
PMS1-220ENST00000618056 SPINT4Q6UDR6 99 aa9.86□□□□□ -0.83
PMS1-220ENST00000618056 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
PMS1-220ENST00000618056 SPRR2EP22531 72 aa9.8□□□□□ -0.84
PMS1-220ENST00000618056 SPRR2BP35325 72 aa9.8□□□□□ -0.84
PMS1-220ENST00000618056 SPRR2AP35326 72 aa9.8□□□□□ -0.84
PMS1-220ENST00000618056 KRTAP20-1Q3LI63 56 aa9.8□□□□□ -0.84
PMS1-220ENST00000618056 LCE1AQ5T7P2 110 aa9.73□□□□□ -0.85
PMS1-220ENST00000618056 ROMO1P60602 79 aa9.67□□□□□ -0.86
PMS1-220ENST00000618056 KRTAP2-3P0C7H8 128 aa9.62□□□□□ -0.87
PMS1-220ENST00000618056 KRTAP2-4Q9BYR9 128 aa9.62□□□□□ -0.87
PMS1-220ENST00000618056 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
PMS1-220ENST00000618056 SPRR2DP22532 72 aa9.48□□□□□ -0.89
PMS1-220ENST00000618056 KRTAP19-7Q3SYF9 63 aa9.35□□□□□ -0.91
PMS1-220ENST00000618056 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms