RNA–Protein interactions for RNA: ENST00000617558.2

AL662899.3-202, humanhuman

TSL 1 (best) BASIC

Gene AL662899.3, Length 991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.3-202ENST00000617558 NDUFC1O43677 76 aa5.59□□□□□ -1.51
AL662899.3-202ENST00000617558 LCA10Q71F78 164 aa5.59□□□□□ -1.51
AL662899.3-202ENST00000617558 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
AL662899.3-202ENST00000617558 H7BZZ5 65 aa5.55□□□□□ -1.52
AL662899.3-202ENST00000617558 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
AL662899.3-202ENST00000617558 MT2AP02795 61 aa5.53□□□□□ -1.52
AL662899.3-202ENST00000617558 CYSTM1Q9H1C7 97 aa5.53□□□□□ -1.52
AL662899.3-202ENST00000617558 ACYP2P14621 99 aa5.52□□□□□ -1.53
AL662899.3-202ENST00000617558 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
AL662899.3-202ENST00000617558 H0YAA0 97 aa5.48□□□□□ -1.53
AL662899.3-202ENST00000617558 MT1FP04733 61 aa5.48□□□□□ -1.53
AL662899.3-202ENST00000617558 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
AL662899.3-202ENST00000617558 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
AL662899.3-202ENST00000617558 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
AL662899.3-202ENST00000617558 SPTSSBQ8NFR3 76 aa5.4□□□□□ -1.54
AL662899.3-202ENST00000617558 COA5Q86WW8 74 aa5.38□□□□□ -1.55
AL662899.3-202ENST00000617558 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
AL662899.3-202ENST00000617558 CHKB-CPT1BH3BT56 60 aa5.37□□□□□ -1.55
AL662899.3-202ENST00000617558 TMEM258P61165 79 aa5.37□□□□□ -1.55
AL662899.3-202ENST00000617558 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
AL662899.3-202ENST00000617558 CRIPTQ9P021 101 aa5.33□□□□□ -1.56
AL662899.3-202ENST00000617558 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
AL662899.3-202ENST00000617558 USH2AO75445 5202 aa5.3□□□□□ -1.56
AL662899.3-202ENST00000617558 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
AL662899.3-202ENST00000617558 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
AL662899.3-202ENST00000617558 PCP4P48539 62 aa5.27□□□□□ -1.57
AL662899.3-202ENST00000617558 P0C880 135 aa5.25□□□□□ -1.57
AL662899.3-202ENST00000617558 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
AL662899.3-202ENST00000617558 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
AL662899.3-202ENST00000617558 SERP1Q9Y6X1 66 aa5.19□□□□□ -1.58
AL662899.3-202ENST00000617558 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
AL662899.3-202ENST00000617558 R4GN34 69 aa5.16□□□□□ -1.58
AL662899.3-202ENST00000617558 M0QZ58 72 aa5.14□□□□□ -1.59
AL662899.3-202ENST00000617558 MT1BP07438 61 aa5.14□□□□□ -1.59
AL662899.3-202ENST00000617558 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
AL662899.3-202ENST00000617558 SEC61GP60059 68 aa5.13□□□□□ -1.59
AL662899.3-202ENST00000617558 Q5VV11 94 aa5.12□□□□□ -1.59
AL662899.3-202ENST00000617558 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
AL662899.3-202ENST00000617558 LINC01558Q9Y6Z2 57 aa5.09□□□□□ -1.59
AL662899.3-202ENST00000617558 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
AL662899.3-202ENST00000617558 A0A1B0GU69 56 aa5.07□□□□□ -1.6
AL662899.3-202ENST00000617558 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
AL662899.3-202ENST00000617558 A6NN06 94 aa5.05□□□□□ -1.6
AL662899.3-202ENST00000617558 FCGBPQ9Y6R7 5405 aaPredicted RBP5.05□□□□□ -1.6
AL662899.3-202ENST00000617558 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
AL662899.3-202ENST00000617558 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
AL662899.3-202ENST00000617558 A0A1B0GU33 70 aa5.03□□□□□ -1.6
AL662899.3-202ENST00000617558 V9GYY9 64 aa5.01□□□□□ -1.61
AL662899.3-202ENST00000617558 Q1T7F1 81 aa5□□□□□ -1.61
AL662899.3-202ENST00000617558 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
AL662899.3-202ENST00000617558 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
AL662899.3-202ENST00000617558 KRTAP10-5P60370 271 aa4.96□□□□□ -1.62
AL662899.3-202ENST00000617558 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
AL662899.3-202ENST00000617558 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
AL662899.3-202ENST00000617558 MT1XP80297 61 aa4.9□□□□□ -1.63
AL662899.3-202ENST00000617558 UQCR11O14957 56 aa4.89□□□□□ -1.63
AL662899.3-202ENST00000617558 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
AL662899.3-202ENST00000617558 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
AL662899.3-202ENST00000617558 PSPHP1O15172 72 aa4.85□□□□□ -1.63
AL662899.3-202ENST00000617558 A0A0D9SG42 100 aa4.84□□□□□ -1.63
AL662899.3-202ENST00000617558 A8MU10 97 aa4.81□□□□□ -1.64
AL662899.3-202ENST00000617558 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
AL662899.3-202ENST00000617558 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
AL662899.3-202ENST00000617558 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
AL662899.3-202ENST00000617558 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
AL662899.3-202ENST00000617558 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
AL662899.3-202ENST00000617558 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
AL662899.3-202ENST00000617558 A6NED7 52 aa4.71□□□□□ -1.66
AL662899.3-202ENST00000617558 H3BS24 57 aa4.7□□□□□ -1.66
AL662899.3-202ENST00000617558 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
AL662899.3-202ENST00000617558 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
AL662899.3-202ENST00000617558 KRTAP10-12P60413 245 aa4.68□□□□□ -1.66
AL662899.3-202ENST00000617558 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
AL662899.3-202ENST00000617558 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
AL662899.3-202ENST00000617558 K7ERS5 55 aa4.63□□□□□ -1.67
AL662899.3-202ENST00000617558 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
AL662899.3-202ENST00000617558 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
AL662899.3-202ENST00000617558 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
AL662899.3-202ENST00000617558 KMT2DO14686 5537 aa4.6□□□□□ -1.67
AL662899.3-202ENST00000617558 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
AL662899.3-202ENST00000617558 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
AL662899.3-202ENST00000617558 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
AL662899.3-202ENST00000617558 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
AL662899.3-202ENST00000617558 TNP1P09430 55 aa4.51□□□□□ -1.69
AL662899.3-202ENST00000617558 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
AL662899.3-202ENST00000617558 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
AL662899.3-202ENST00000617558 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
AL662899.3-202ENST00000617558 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
AL662899.3-202ENST00000617558 BRK1Q8WUW1 75 aa4.41□□□□□ -1.7
AL662899.3-202ENST00000617558 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
AL662899.3-202ENST00000617558 ROMO1P60602 79 aa4.39□□□□□ -1.71
AL662899.3-202ENST00000617558 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
AL662899.3-202ENST00000617558 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
AL662899.3-202ENST00000617558 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
AL662899.3-202ENST00000617558 NEBP20929 6669 aa4.37□□□□□ -1.71
AL662899.3-202ENST00000617558 MT1EP04732 61 aa4.32□□□□□ -1.72
AL662899.3-202ENST00000617558 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
AL662899.3-202ENST00000617558 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
AL662899.3-202ENST00000617558 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
AL662899.3-202ENST00000617558 SPRR2EP22531 72 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms