RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
TARDBP-217ENST00000616545 MUC2Q02817 5179 aa5.76□□□□□ -1.49
TARDBP-217ENST00000616545 TMEM258P61165 79 aa5.75□□□□□ -1.49
TARDBP-217ENST00000616545 S4R3F8 94 aa5.73□□□□□ -1.49
TARDBP-217ENST00000616545 MT1HP80294 61 aa5.71□□□□□ -1.5
TARDBP-217ENST00000616545 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
TARDBP-217ENST00000616545 M0R2T5 61 aa5.67□□□□□ -1.5
TARDBP-217ENST00000616545 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
TARDBP-217ENST00000616545 LCA10Q71F78 164 aa5.67□□□□□ -1.5
TARDBP-217ENST00000616545 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
TARDBP-217ENST00000616545 COA5Q86WW8 74 aa5.63□□□□□ -1.51
TARDBP-217ENST00000616545 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
TARDBP-217ENST00000616545 FAT4Q6V0I7 4981 aa5.59□□□□□ -1.51
TARDBP-217ENST00000616545 SERP1Q9Y6X1 66 aa5.57□□□□□ -1.52
TARDBP-217ENST00000616545 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
TARDBP-217ENST00000616545 H0YAA0 97 aa5.55□□□□□ -1.52
TARDBP-217ENST00000616545 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
TARDBP-217ENST00000616545 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
TARDBP-217ENST00000616545 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
TARDBP-217ENST00000616545 SEC61GP60059 68 aa5.44□□□□□ -1.54
TARDBP-217ENST00000616545 MT2AP02795 61 aa5.43□□□□□ -1.54
TARDBP-217ENST00000616545 ADM2Q7Z4H4 148 aa5.43□□□□□ -1.54
TARDBP-217ENST00000616545 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
TARDBP-217ENST00000616545 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
TARDBP-217ENST00000616545 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
TARDBP-217ENST00000616545 V9GYY9 64 aa5.4□□□□□ -1.54
TARDBP-217ENST00000616545 LINC01558Q9Y6Z2 57 aa5.39□□□□□ -1.55
TARDBP-217ENST00000616545 MT1FP04733 61 aa5.38□□□□□ -1.55
TARDBP-217ENST00000616545 A0A1B0GU69 56 aa5.37□□□□□ -1.55
TARDBP-217ENST00000616545 PRR15LQ9BU68 103 aa5.37□□□□□ -1.55
TARDBP-217ENST00000616545 P0C880 135 aa5.34□□□□□ -1.55
TARDBP-217ENST00000616545 Q1T7F1 81 aa5.34□□□□□ -1.55
TARDBP-217ENST00000616545 M0QZ58 72 aa5.3□□□□□ -1.56
TARDBP-217ENST00000616545 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
TARDBP-217ENST00000616545 R4GN34 69 aa5.29□□□□□ -1.56
TARDBP-217ENST00000616545 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
TARDBP-217ENST00000616545 A0A1B0GU33 70 aa5.27□□□□□ -1.57
TARDBP-217ENST00000616545 Q5VV11 94 aa5.23□□□□□ -1.57
TARDBP-217ENST00000616545 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
TARDBP-217ENST00000616545 UQCR11O14957 56 aa5.19□□□□□ -1.58
TARDBP-217ENST00000616545 PSPHP1O15172 72 aa5.19□□□□□ -1.58
TARDBP-217ENST00000616545 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
TARDBP-217ENST00000616545 A6NN06 94 aa5.15□□□□□ -1.59
TARDBP-217ENST00000616545 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
TARDBP-217ENST00000616545 LINC01554Q52M75 96 aa5.11□□□□□ -1.59
TARDBP-217ENST00000616545 SPATA8Q6RVD6 105 aa5.11□□□□□ -1.59
TARDBP-217ENST00000616545 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
TARDBP-217ENST00000616545 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
TARDBP-217ENST00000616545 A6NED7 52 aa5.07□□□□□ -1.6
TARDBP-217ENST00000616545 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
TARDBP-217ENST00000616545 MT1BP07438 61 aa5.06□□□□□ -1.6
TARDBP-217ENST00000616545 A0A0D9SG42 100 aa5.04□□□□□ -1.6
TARDBP-217ENST00000616545 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
TARDBP-217ENST00000616545 A8MU10 97 aa5□□□□□ -1.61
TARDBP-217ENST00000616545 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
TARDBP-217ENST00000616545 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
TARDBP-217ENST00000616545 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
TARDBP-217ENST00000616545 K7ERS5 55 aa4.96□□□□□ -1.62
TARDBP-217ENST00000616545 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
TARDBP-217ENST00000616545 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
TARDBP-217ENST00000616545 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
TARDBP-217ENST00000616545 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
TARDBP-217ENST00000616545 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
TARDBP-217ENST00000616545 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
TARDBP-217ENST00000616545 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
TARDBP-217ENST00000616545 USH2AO75445 5202 aa4.88□□□□□ -1.63
TARDBP-217ENST00000616545 MT1XP80297 61 aa4.85□□□□□ -1.63
TARDBP-217ENST00000616545 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
TARDBP-217ENST00000616545 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
TARDBP-217ENST00000616545 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
TARDBP-217ENST00000616545 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
TARDBP-217ENST00000616545 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
TARDBP-217ENST00000616545 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
TARDBP-217ENST00000616545 TNP1P09430 55 aa4.68□□□□□ -1.66
TARDBP-217ENST00000616545 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
TARDBP-217ENST00000616545 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
TARDBP-217ENST00000616545 ROMO1P60602 79 aa4.66□□□□□ -1.66
TARDBP-217ENST00000616545 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
TARDBP-217ENST00000616545 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
TARDBP-217ENST00000616545 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
TARDBP-217ENST00000616545 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
TARDBP-217ENST00000616545 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
TARDBP-217ENST00000616545 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
TARDBP-217ENST00000616545 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
TARDBP-217ENST00000616545 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
TARDBP-217ENST00000616545 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
TARDBP-217ENST00000616545 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
TARDBP-217ENST00000616545 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
TARDBP-217ENST00000616545 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
TARDBP-217ENST00000616545 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
TARDBP-217ENST00000616545 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
TARDBP-217ENST00000616545 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
TARDBP-217ENST00000616545 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
TARDBP-217ENST00000616545 KRTAP5-9P26371 169 aa4.4□□□□□ -1.71
TARDBP-217ENST00000616545 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
TARDBP-217ENST00000616545 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
TARDBP-217ENST00000616545 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
TARDBP-217ENST00000616545 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
TARDBP-217ENST00000616545 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
TARDBP-217ENST00000616545 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms