RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-238ENST00000616352 LCA10Q71F78 164 aa11.13□□□□□ -0.63
ACACA-238ENST00000616352 ACYP2P14621 99 aa11.08□□□□□ -0.64
ACACA-238ENST00000616352 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
ACACA-238ENST00000616352 KRTAP10-6P60371 365 aaPredicted RBP11.06□□□□□ -0.64
ACACA-238ENST00000616352 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
ACACA-238ENST00000616352 CSAG1Q6PB30 78 aa10.98□□□□□ -0.65
ACACA-238ENST00000616352 KRTAP9-8Q9BYQ0 159 aa10.92□□□□□ -0.66
ACACA-238ENST00000616352 TMEM258P61165 79 aa10.9□□□□□ -0.66
ACACA-238ENST00000616352 ATP5EP56381 51 aaPredicted RBP10.88□□□□□ -0.67
ACACA-238ENST00000616352 COA5Q86WW8 74 aa10.87□□□□□ -0.67
ACACA-238ENST00000616352 CHKB-CPT1BH3BT56 60 aa10.85□□□□□ -0.67
ACACA-238ENST00000616352 MT2AP02795 61 aa10.83□□□□□ -0.68
ACACA-238ENST00000616352 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
ACACA-238ENST00000616352 MT1FP04733 61 aa10.76□□□□□ -0.69
ACACA-238ENST00000616352 H0YAA0 97 aa10.73□□□□□ -0.69
ACACA-238ENST00000616352 KRTAP10-10P60014 251 aa10.69□□□□□ -0.7
ACACA-238ENST00000616352 ADM2Q7Z4H4 148 aa10.61□□□□□ -0.71
ACACA-238ENST00000616352 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
ACACA-238ENST00000616352 KRTAP9-3Q9BYQ3 159 aa10.55□□□□□ -0.72
ACACA-238ENST00000616352 SERP1Q9Y6X1 66 aa10.55□□□□□ -0.72
ACACA-238ENST00000616352 P0C880 135 aa10.5□□□□□ -0.73
ACACA-238ENST00000616352 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
ACACA-238ENST00000616352 CRIPTQ9P021 101 aa10.42□□□□□ -0.74
ACACA-238ENST00000616352 KRTAP19-1Q8IUB9 90 aa10.39□□□□□ -0.75
ACACA-238ENST00000616352 SPRR2GQ9BYE4 73 aa10.36□□□□□ -0.75
ACACA-238ENST00000616352 KRTAP9-2Q9BYQ4 174 aa10.36□□□□□ -0.75
ACACA-238ENST00000616352 LCE2BO14633 110 aa10.34□□□□□ -0.75
ACACA-238ENST00000616352 SEC61GP60059 68 aa10.33□□□□□ -0.76
ACACA-238ENST00000616352 RPS28P62857 69 aaKnown RBP10.3□□□□□ -0.76
ACACA-238ENST00000616352 LINC01558Q9Y6Z2 57 aa10.29□□□□□ -0.76
ACACA-238ENST00000616352 USH2AO75445 5202 aa10.28□□□□□ -0.76
ACACA-238ENST00000616352 A0A1B0GU69 56 aa10.27□□□□□ -0.77
ACACA-238ENST00000616352 R4GN34 69 aa10.26□□□□□ -0.77
ACACA-238ENST00000616352 M0QZ58 72 aa10.22□□□□□ -0.77
ACACA-238ENST00000616352 SMIM26A0A096LP01 95 aa10.19□□□□□ -0.78
ACACA-238ENST00000616352 KRTAP19-8Q3LI54 63 aa10.18□□□□□ -0.78
ACACA-238ENST00000616352 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
ACACA-238ENST00000616352 FSIP2Q5CZC0 6907 aa10.14□□□□□ -0.79
ACACA-238ENST00000616352 Q1T7F1 81 aa10.14□□□□□ -0.79
ACACA-238ENST00000616352 A0A1B0GU33 70 aa10.13□□□□□ -0.79
ACACA-238ENST00000616352 KRTAP13-4Q3LI77 160 aa10.13□□□□□ -0.79
ACACA-238ENST00000616352 V9GYY9 64 aa10.11□□□□□ -0.79
ACACA-238ENST00000616352 MT1BP07438 61 aa10.07□□□□□ -0.8
ACACA-238ENST00000616352 Q5VV11 94 aa10.06□□□□□ -0.8
ACACA-238ENST00000616352 SVIPQ8NHG7 77 aa10.03□□□□□ -0.8
ACACA-238ENST00000616352 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
ACACA-238ENST00000616352 SSPOA2VEC9 5147 aa10.02□□□□□ -0.81
ACACA-238ENST00000616352 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
ACACA-238ENST00000616352 PSPHP1O15172 72 aa9.96□□□□□ -0.81
ACACA-238ENST00000616352 CRCT1Q9UGL9 99 aa9.9□□□□□ -0.82
ACACA-238ENST00000616352 A6NN06 94 aa9.89□□□□□ -0.83
ACACA-238ENST00000616352 UQCR11O14957 56 aa9.87□□□□□ -0.83
ACACA-238ENST00000616352 A0A0D9SG42 100 aa9.84□□□□□ -0.83
ACACA-238ENST00000616352 KRTAP19-6Q3LI70 58 aa9.84□□□□□ -0.83
ACACA-238ENST00000616352 PLAC4Q8WY50 150 aa9.84□□□□□ -0.83
ACACA-238ENST00000616352 A8MU10 97 aa9.78□□□□□ -0.84
ACACA-238ENST00000616352 KRTAP9-6A0A140TA67 174 aa9.74□□□□□ -0.85
ACACA-238ENST00000616352 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.85
ACACA-238ENST00000616352 KRTAP12-1P59990 96 aa9.71□□□□□ -0.86
ACACA-238ENST00000616352 FCGBPQ9Y6R7 5405 aaPredicted RBP9.7□□□□□ -0.86
ACACA-238ENST00000616352 KRTAP10-5P60370 271 aa9.67□□□□□ -0.86
ACACA-238ENST00000616352 A6NED7 52 aa9.66□□□□□ -0.86
ACACA-238ENST00000616352 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
ACACA-238ENST00000616352 SPINT4Q6UDR6 99 aa9.64□□□□□ -0.87
ACACA-238ENST00000616352 MT1XP80297 61 aa9.64□□□□□ -0.87
ACACA-238ENST00000616352 PRO2289Q9P1D8 64 aa9.56□□□□□ -0.88
ACACA-238ENST00000616352 CAMK2N1Q7Z7J9 78 aa9.53□□□□□ -0.88
ACACA-238ENST00000616352 CDC42SE1Q9NRR8 79 aa9.43□□□□□ -0.9
ACACA-238ENST00000616352 PRO0628Q9UI54 55 aa9.42□□□□□ -0.9
ACACA-238ENST00000616352 K7ERS5 55 aa9.34□□□□□ -0.91
ACACA-238ENST00000616352 BRK1Q8WUW1 75 aa9.27□□□□□ -0.92
ACACA-238ENST00000616352 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
ACACA-238ENST00000616352 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
ACACA-238ENST00000616352 KRTAP10-7P60409 375 aaPredicted RBP9.2□□□□□ -0.94
ACACA-238ENST00000616352 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
ACACA-238ENST00000616352 KRTAP10-12P60413 245 aa9.16□□□□□ -0.94
ACACA-238ENST00000616352 KMT2DO14686 5537 aa9.14□□□□□ -0.95
ACACA-238ENST00000616352 SYNE2Q8WXH0 6885 aaKnown RBP9.05□□□□□ -0.96
ACACA-238ENST00000616352 TNP1P09430 55 aa9□□□□□ -0.97
ACACA-238ENST00000616352 KRTAP4-8A0A0G2JLE6 195 aa8.98□□□□□ -0.97
ACACA-238ENST00000616352 KRTAP4-8Q9BYQ9 185 aa8.98□□□□□ -0.97
ACACA-238ENST00000616352 ROMO1P60602 79 aa8.89□□□□□ -0.99
ACACA-238ENST00000616352 KRTAP25-1Q3LHN0 102 aa8.87□□□□□ -0.99
ACACA-238ENST00000616352 KRTAP8-1Q8IUC2 63 aa8.86□□□□□ -0.99
ACACA-238ENST00000616352 KRTAP9-7A8MTY7 169 aa8.85□□□□□ -0.99
ACACA-238ENST00000616352 KRTAP6-3Q3LI67 103 aa8.83□□□□□ -1
ACACA-238ENST00000616352 PMAIP1Q13794 54 aa8.8□□□□□ -1
ACACA-238ENST00000616352 KRTAP5-9P26371 169 aa8.77□□□□□ -1.01
ACACA-238ENST00000616352 LCE3AQ5TA76 89 aa8.73□□□□□ -1.01
ACACA-238ENST00000616352 SPRR2FQ96RM1 72 aa8.65□□□□□ -1.02
ACACA-238ENST00000616352 MUC12Q9UKN1 5478 aa8.65□□□□□ -1.03
ACACA-238ENST00000616352 KTN1-AS1Q86SY8 53 aa8.64□□□□□ -1.03
ACACA-238ENST00000616352 KRTAP19-7Q3SYF9 63 aa8.62□□□□□ -1.03
ACACA-238ENST00000616352 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
ACACA-238ENST00000616352 KRTAP19-5Q3LI72 72 aa8.56□□□□□ -1.04
ACACA-238ENST00000616352 MDN1Q9NU22 5596 aa8.53□□□□□ -1.04
ACACA-238ENST00000616352 MT1EP04732 61 aa8.48□□□□□ -1.05
ACACA-238ENST00000616352 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
ACACA-238ENST00000616352 KRTAP12-3P60328 96 aa8.4□□□□□ -1.06
ACACA-238ENST00000616352 NEBP20929 6669 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms