RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, humanhuman

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-204ENST00000616051 LCA10Q71F78 164 aa13.31□□□□□ -0.28
RCC1L-204ENST00000616051 DMAC1Q96GE9 116 aa13.29□□□□□ -0.28
RCC1L-204ENST00000616051 TMEM258P61165 79 aa13.26□□□□□ -0.29
RCC1L-204ENST00000616051 KRTAP9-8Q9BYQ0 159 aa13.23□□□□□ -0.29
RCC1L-204ENST00000616051 KRTAP3-3Q9BYR6 98 aa13.22□□□□□ -0.29
RCC1L-204ENST00000616051 SPANXA2-OT1Q8N9U9 137 aa13.19□□□□□ -0.3
RCC1L-204ENST00000616051 CSAG1Q6PB30 78 aa13.17□□□□□ -0.3
RCC1L-204ENST00000616051 ACYP2P14621 99 aa13.12□□□□□ -0.31
RCC1L-204ENST00000616051 ATP5EP56381 51 aaPredicted RBP13.12□□□□□ -0.31
RCC1L-204ENST00000616051 MT2AP02795 61 aa13.11□□□□□ -0.31
RCC1L-204ENST00000616051 MT1FP04733 61 aa13.02□□□□□ -0.33
RCC1L-204ENST00000616051 KRTAP10-10P60014 251 aa12.97□□□□□ -0.33
RCC1L-204ENST00000616051 LCE2DQ5TA82 110 aaPredicted RBP12.88□□□□□ -0.35
RCC1L-204ENST00000616051 CHKB-CPT1BH3BT56 60 aa12.86□□□□□ -0.35
RCC1L-204ENST00000616051 SERP1Q9Y6X1 66 aa12.84□□□□□ -0.35
RCC1L-204ENST00000616051 KRTAP9-3Q9BYQ3 159 aa12.79□□□□□ -0.36
RCC1L-204ENST00000616051 KRTAP9-2Q9BYQ4 174 aa12.79□□□□□ -0.36
RCC1L-204ENST00000616051 H0YAA0 97 aa12.78□□□□□ -0.36
RCC1L-204ENST00000616051 COA5Q86WW8 74 aa12.78□□□□□ -0.36
RCC1L-204ENST00000616051 SPTSSBQ8NFR3 76 aa12.77□□□□□ -0.36
RCC1L-204ENST00000616051 RPS28P62857 69 aaKnown RBP12.75□□□□□ -0.37
RCC1L-204ENST00000616051 ADM2Q7Z4H4 148 aa12.68□□□□□ -0.38
RCC1L-204ENST00000616051 LCE2BO14633 110 aa12.56□□□□□ -0.4
RCC1L-204ENST00000616051 KRTAP3-2Q9BYR7 98 aa12.55□□□□□ -0.4
RCC1L-204ENST00000616051 P0C880 135 aa12.51□□□□□ -0.41
RCC1L-204ENST00000616051 KRTAP19-1Q8IUB9 90 aa12.51□□□□□ -0.41
RCC1L-204ENST00000616051 CRIPTQ9P021 101 aa12.5□□□□□ -0.41
RCC1L-204ENST00000616051 SMIM26A0A096LP01 95 aa12.48□□□□□ -0.41
RCC1L-204ENST00000616051 SPRR2GQ9BYE4 73 aa12.45□□□□□ -0.42
RCC1L-204ENST00000616051 USH2AO75445 5202 aa12.38□□□□□ -0.43
RCC1L-204ENST00000616051 FSIP2Q5CZC0 6907 aa12.38□□□□□ -0.43
RCC1L-204ENST00000616051 R4GN34 69 aa12.28□□□□□ -0.44
RCC1L-204ENST00000616051 Q1T7F1 81 aa12.27□□□□□ -0.44
RCC1L-204ENST00000616051 V9GYY9 64 aa12.27□□□□□ -0.44
RCC1L-204ENST00000616051 KRTAP19-8Q3LI54 63 aa12.26□□□□□ -0.45
RCC1L-204ENST00000616051 SEC61GP60059 68 aa12.24□□□□□ -0.45
RCC1L-204ENST00000616051 M0QZ58 72 aa12.22□□□□□ -0.45
RCC1L-204ENST00000616051 CRCT1Q9UGL9 99 aa12.22□□□□□ -0.45
RCC1L-204ENST00000616051 LINC01558Q9Y6Z2 57 aa12.22□□□□□ -0.45
RCC1L-204ENST00000616051 Q5VV11 94 aa12.16□□□□□ -0.46
RCC1L-204ENST00000616051 MT1BP07438 61 aa12.15□□□□□ -0.46
RCC1L-204ENST00000616051 SSPOA2VEC9 5147 aa12.12□□□□□ -0.47
RCC1L-204ENST00000616051 A0A1B0GU69 56 aa12.11□□□□□ -0.47
RCC1L-204ENST00000616051 KRTAP9-6A0A140TA67 174 aa12.09□□□□□ -0.47
RCC1L-204ENST00000616051 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
RCC1L-204ENST00000616051 PSPHP1O15172 72 aa12.05□□□□□ -0.48
RCC1L-204ENST00000616051 KRTAP13-4Q3LI77 160 aa12.01□□□□□ -0.49
RCC1L-204ENST00000616051 LINC01554Q52M75 96 aa12.01□□□□□ -0.49
RCC1L-204ENST00000616051 A0A1B0GU33 70 aa11.99□□□□□ -0.49
RCC1L-204ENST00000616051 KRTAP19-6Q3LI70 58 aa11.97□□□□□ -0.49
RCC1L-204ENST00000616051 SPATA8Q6RVD6 105 aa11.86□□□□□ -0.51
RCC1L-204ENST00000616051 PLAC4Q8WY50 150 aa11.86□□□□□ -0.51
RCC1L-204ENST00000616051 A6NN06 94 aa11.77□□□□□ -0.53
RCC1L-204ENST00000616051 FCGBPQ9Y6R7 5405 aaPredicted RBP11.74□□□□□ -0.53
RCC1L-204ENST00000616051 A0A0D9SG42 100 aa11.71□□□□□ -0.54
RCC1L-204ENST00000616051 A6NED7 52 aa11.71□□□□□ -0.54
RCC1L-204ENST00000616051 UQCR11O14957 56 aa11.7□□□□□ -0.54
RCC1L-204ENST00000616051 KRTAP10-5P60370 271 aa11.7□□□□□ -0.54
RCC1L-204ENST00000616051 MT1XP80297 61 aa11.58□□□□□ -0.56
RCC1L-204ENST00000616051 A8MU10 97 aa11.57□□□□□ -0.56
RCC1L-204ENST00000616051 MIR22HGQ0VDD5 57 aa11.55□□□□□ -0.56
RCC1L-204ENST00000616051 PRO2289Q9P1D8 64 aa11.55□□□□□ -0.56
RCC1L-204ENST00000616051 KRTAP12-1P59990 96 aa11.5□□□□□ -0.57
RCC1L-204ENST00000616051 SPINT4Q6UDR6 99 aa11.49□□□□□ -0.57
RCC1L-204ENST00000616051 BRK1Q8WUW1 75 aa11.47□□□□□ -0.57
RCC1L-204ENST00000616051 CDC42SE1Q9NRR8 79 aa11.47□□□□□ -0.57
RCC1L-204ENST00000616051 KRTAP12-2P59991 146 aa11.43□□□□□ -0.58
RCC1L-204ENST00000616051 CAMK2N1Q7Z7J9 78 aa11.4□□□□□ -0.58
RCC1L-204ENST00000616051 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.34□□□□□ -0.59
RCC1L-204ENST00000616051 MACF1Q9UPN3 7388 aaKnown RBP11.25□□□□□ -0.61
RCC1L-204ENST00000616051 PRO0628Q9UI54 55 aa11.15□□□□□ -0.62
RCC1L-204ENST00000616051 K7ERS5 55 aa11.09□□□□□ -0.63
RCC1L-204ENST00000616051 KRTAP10-7P60409 375 aaPredicted RBP11.08□□□□□ -0.64
RCC1L-204ENST00000616051 SYNE2Q8WXH0 6885 aaKnown RBP11.02□□□□□ -0.64
RCC1L-204ENST00000616051 KRTAP10-12P60413 245 aa11□□□□□ -0.65
RCC1L-204ENST00000616051 KRTAP9-7A8MTY7 169 aa10.96□□□□□ -0.65
RCC1L-204ENST00000616051 C10orf95Q9H7T3 257 aa10.95□□□□□ -0.66
RCC1L-204ENST00000616051 KMT2DO14686 5537 aa10.88□□□□□ -0.67
RCC1L-204ENST00000616051 KRTAP4-8A0A0G2JLE6 195 aa10.86□□□□□ -0.67
RCC1L-204ENST00000616051 KRTAP4-8Q9BYQ9 185 aa10.86□□□□□ -0.67
RCC1L-204ENST00000616051 KRTAP6-3Q3LI67 103 aa10.85□□□□□ -0.67
RCC1L-204ENST00000616051 PMAIP1Q13794 54 aa10.84□□□□□ -0.67
RCC1L-204ENST00000616051 KRTAP8-1Q8IUC2 63 aa10.75□□□□□ -0.69
RCC1L-204ENST00000616051 TNP1P09430 55 aa10.73□□□□□ -0.69
RCC1L-204ENST00000616051 KRTAP5-9P26371 169 aa10.68□□□□□ -0.7
RCC1L-204ENST00000616051 ROMO1P60602 79 aa10.58□□□□□ -0.72
RCC1L-204ENST00000616051 SPRR2FQ96RM1 72 aa10.55□□□□□ -0.72
RCC1L-204ENST00000616051 KRTAP25-1Q3LHN0 102 aa10.5□□□□□ -0.73
RCC1L-204ENST00000616051 LCE3AQ5TA76 89 aa10.44□□□□□ -0.74
RCC1L-204ENST00000616051 MUC12Q9UKN1 5478 aa10.4□□□□□ -0.74
RCC1L-204ENST00000616051 KRTAP19-7Q3SYF9 63 aa10.35□□□□□ -0.75
RCC1L-204ENST00000616051 KTN1-AS1Q86SY8 53 aa10.35□□□□□ -0.75
RCC1L-204ENST00000616051 KRTAP19-5Q3LI72 72 aa10.29□□□□□ -0.76
RCC1L-204ENST00000616051 SVIPQ8NHG7 77 aa10.29□□□□□ -0.76
RCC1L-204ENST00000616051 MDN1Q9NU22 5596 aa10.24□□□□□ -0.77
RCC1L-204ENST00000616051 NEBP20929 6669 aa10.22□□□□□ -0.77
RCC1L-204ENST00000616051 MT1EP04732 61 aa10.21□□□□□ -0.78
RCC1L-204ENST00000616051 SPRR2EP22531 72 aa10.21□□□□□ -0.78
RCC1L-204ENST00000616051 SPRR2BP35325 72 aa10.21□□□□□ -0.78
RCC1L-204ENST00000616051 SPRR2AP35326 72 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms