RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
MUC1-224ENST00000611577 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
MUC1-224ENST00000611577 KRTAP3-1Q9BYR8 98 aa8.46□□□□□ -1.06
MUC1-224ENST00000611577 S4R3F8 94 aa8.46□□□□□ -1.06
MUC1-224ENST00000611577 H3BPC8 53 aa8.45□□□□□ -1.06
MUC1-224ENST00000611577 SMIM20Q8N5G0 67 aa8.43□□□□□ -1.06
MUC1-224ENST00000611577 KLKP1Q107X0 134 aa8.4□□□□□ -1.06
MUC1-224ENST00000611577 TRAV7A0A075B6U4 112 aa8.38□□□□□ -1.07
MUC1-224ENST00000611577 KRTAP6-3Q3LI67 103 aa8.37□□□□□ -1.07
MUC1-224ENST00000611577 LCA10Q71F78 164 aa8.37□□□□□ -1.07
MUC1-224ENST00000611577 CSAG1Q6PB30 78 aa8.35□□□□□ -1.07
MUC1-224ENST00000611577 NEBP20929 6669 aa8.35□□□□□ -1.07
MUC1-224ENST00000611577 A8MUN3 132 aa8.33□□□□□ -1.08
MUC1-224ENST00000611577 NDUFC1O43677 76 aa8.25□□□□□ -1.09
MUC1-224ENST00000611577 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
MUC1-224ENST00000611577 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
MUC1-224ENST00000611577 SNURFQ9Y675 71 aa8.19□□□□□ -1.1
MUC1-224ENST00000611577 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
MUC1-224ENST00000611577 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
MUC1-224ENST00000611577 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
MUC1-224ENST00000611577 ACYP2P14621 99 aa8.09□□□□□ -1.11
MUC1-224ENST00000611577 COX7CP15954 63 aa8.05□□□□□ -1.12
MUC1-224ENST00000611577 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.13
MUC1-224ENST00000611577 SPANXA2-OT1Q8N9U9 137 aa8.01□□□□□ -1.13
MUC1-224ENST00000611577 H0YAA0 97 aa8□□□□□ -1.13
MUC1-224ENST00000611577 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
MUC1-224ENST00000611577 A6NN06 94 aa7.98□□□□□ -1.13
MUC1-224ENST00000611577 KRTAP20-1Q3LI63 56 aa7.98□□□□□ -1.13
MUC1-224ENST00000611577 SPTSSBQ8NFR3 76 aa7.98□□□□□ -1.13
MUC1-224ENST00000611577 ANAPC13Q9BS18 74 aa7.98□□□□□ -1.13
MUC1-224ENST00000611577 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
MUC1-224ENST00000611577 MDN1Q9NU22 5596 aa7.9□□□□□ -1.14
MUC1-224ENST00000611577 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
MUC1-224ENST00000611577 MT1BP07438 61 aa7.87□□□□□ -1.15
MUC1-224ENST00000611577 KMT2DO14686 5537 aa7.86□□□□□ -1.15
MUC1-224ENST00000611577 Q5VV11 94 aa7.86□□□□□ -1.15
MUC1-224ENST00000611577 H7BZZ5 65 aa7.82□□□□□ -1.16
MUC1-224ENST00000611577 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
MUC1-224ENST00000611577 P0C880 135 aa7.8□□□□□ -1.16
MUC1-224ENST00000611577 COA5Q86WW8 74 aa7.8□□□□□ -1.16
MUC1-224ENST00000611577 KRTAP5-9P26371 169 aa7.79□□□□□ -1.16
MUC1-224ENST00000611577 R4GN34 69 aa7.79□□□□□ -1.16
MUC1-224ENST00000611577 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
MUC1-224ENST00000611577 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
MUC1-224ENST00000611577 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
MUC1-224ENST00000611577 M0QZ58 72 aa7.73□□□□□ -1.17
MUC1-224ENST00000611577 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
MUC1-224ENST00000611577 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
MUC1-224ENST00000611577 KRTAP2-3P0C7H8 128 aa7.63□□□□□ -1.19
MUC1-224ENST00000611577 SEC61GP60059 68 aa7.63□□□□□ -1.19
MUC1-224ENST00000611577 KRTAP2-4Q9BYR9 128 aa7.63□□□□□ -1.19
MUC1-224ENST00000611577 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
MUC1-224ENST00000611577 PLAC4Q8WY50 150 aa7.6□□□□□ -1.19
MUC1-224ENST00000611577 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
MUC1-224ENST00000611577 TMEM258P61165 79 aa7.51□□□□□ -1.21
MUC1-224ENST00000611577 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
MUC1-224ENST00000611577 SPRR2EP22531 72 aa7.49□□□□□ -1.21
MUC1-224ENST00000611577 SPRR2BP35325 72 aa7.49□□□□□ -1.21
MUC1-224ENST00000611577 SPRR2AP35326 72 aa7.49□□□□□ -1.21
MUC1-224ENST00000611577 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
MUC1-224ENST00000611577 A0A1B0GU69 56 aa7.44□□□□□ -1.22
MUC1-224ENST00000611577 A0A1B0GU33 70 aa7.39□□□□□ -1.23
MUC1-224ENST00000611577 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
MUC1-224ENST00000611577 KRTAP2-2Q9BYT5 123 aa7.36□□□□□ -1.23
MUC1-224ENST00000611577 KRTAP2-1Q9BYU5 128 aa7.36□□□□□ -1.23
MUC1-224ENST00000611577 MT1XP80297 61 aa7.34□□□□□ -1.23
MUC1-224ENST00000611577 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
MUC1-224ENST00000611577 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
MUC1-224ENST00000611577 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
MUC1-224ENST00000611577 A0A0D9SG42 100 aa7.31□□□□□ -1.24
MUC1-224ENST00000611577 LCE1AQ5T7P2 110 aa7.31□□□□□ -1.24
MUC1-224ENST00000611577 SPRR2DP22532 72 aa7.25□□□□□ -1.25
MUC1-224ENST00000611577 LINC01558Q9Y6Z2 57 aa7.25□□□□□ -1.25
MUC1-224ENST00000611577 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
MUC1-224ENST00000611577 SMIM26A0A096LP01 95 aa7.21□□□□□ -1.26
MUC1-224ENST00000611577 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
MUC1-224ENST00000611577 PCP4P48539 62 aa7.18□□□□□ -1.26
MUC1-224ENST00000611577 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
MUC1-224ENST00000611577 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
MUC1-224ENST00000611577 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
MUC1-224ENST00000611577 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
MUC1-224ENST00000611577 A8MU10 97 aa7.1□□□□□ -1.27
MUC1-224ENST00000611577 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
MUC1-224ENST00000611577 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
MUC1-224ENST00000611577 V9GYY9 64 aa7.08□□□□□ -1.28
MUC1-224ENST00000611577 UQCR11O14957 56 aa7.06□□□□□ -1.28
MUC1-224ENST00000611577 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
MUC1-224ENST00000611577 PSPHP1O15172 72 aa6.98□□□□□ -1.29
MUC1-224ENST00000611577 Q1T7F1 81 aa6.98□□□□□ -1.29
MUC1-224ENST00000611577 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
MUC1-224ENST00000611577 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
MUC1-224ENST00000611577 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.3
MUC1-224ENST00000611577 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
MUC1-224ENST00000611577 K7ERS5 55 aa6.81□□□□□ -1.32
MUC1-224ENST00000611577 A6NED7 52 aa6.79□□□□□ -1.32
MUC1-224ENST00000611577 TNP1P09430 55 aa6.74□□□□□ -1.33
MUC1-224ENST00000611577 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
MUC1-224ENST00000611577 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
MUC1-224ENST00000611577 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
MUC1-224ENST00000611577 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms