RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
CTCFL-215ENST00000608158 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
CTCFL-215ENST00000608158 S4R3F8 94 aa8.28□□□□□ -1.08
CTCFL-215ENST00000608158 LCA10Q71F78 164 aa8.26□□□□□ -1.09
CTCFL-215ENST00000608158 Q5VV11 94 aa8.26□□□□□ -1.09
CTCFL-215ENST00000608158 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
CTCFL-215ENST00000608158 A0A1B0GU69 56 aa8.21□□□□□ -1.1
CTCFL-215ENST00000608158 UBR4Q5T4S7 5183 aa8.17□□□□□ -1.1
CTCFL-215ENST00000608158 KRTAP19-2Q3LHN2 52 aa8.16□□□□□ -1.1
CTCFL-215ENST00000608158 MUC2Q02817 5179 aa8.13□□□□□ -1.11
CTCFL-215ENST00000608158 SEC61GP60059 68 aa8.11□□□□□ -1.11
CTCFL-215ENST00000608158 A6NED7 52 aa8.06□□□□□ -1.12
CTCFL-215ENST00000608158 CSAG1Q6PB30 78 aa8.06□□□□□ -1.12
CTCFL-215ENST00000608158 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
CTCFL-215ENST00000608158 BRK1Q8WUW1 75 aa8.04□□□□□ -1.12
CTCFL-215ENST00000608158 SVIPQ8NHG7 77 aa8.02□□□□□ -1.12
CTCFL-215ENST00000608158 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
CTCFL-215ENST00000608158 UQCR11O14957 56 aa7.96□□□□□ -1.14
CTCFL-215ENST00000608158 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.14
CTCFL-215ENST00000608158 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
CTCFL-215ENST00000608158 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
CTCFL-215ENST00000608158 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
CTCFL-215ENST00000608158 A8MU10 97 aa7.93□□□□□ -1.14
CTCFL-215ENST00000608158 A0A1B0GU33 70 aa7.92□□□□□ -1.14
CTCFL-215ENST00000608158 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
CTCFL-215ENST00000608158 H0YAA0 97 aa7.9□□□□□ -1.14
CTCFL-215ENST00000608158 P0C880 135 aa7.9□□□□□ -1.15
CTCFL-215ENST00000608158 MIR22HGQ0VDD5 57 aa7.88□□□□□ -1.15
CTCFL-215ENST00000608158 PRO0628Q9UI54 55 aa7.88□□□□□ -1.15
CTCFL-215ENST00000608158 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
CTCFL-215ENST00000608158 FAT4Q6V0I7 4981 aa7.84□□□□□ -1.15
CTCFL-215ENST00000608158 MT1HP80294 61 aa7.78□□□□□ -1.16
CTCFL-215ENST00000608158 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
CTCFL-215ENST00000608158 M0R2T5 61 aa7.69□□□□□ -1.18
CTCFL-215ENST00000608158 M0QZ58 72 aa7.67□□□□□ -1.18
CTCFL-215ENST00000608158 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
CTCFL-215ENST00000608158 A0A0D9SG42 100 aa7.62□□□□□ -1.19
CTCFL-215ENST00000608158 R4GN34 69 aa7.62□□□□□ -1.19
CTCFL-215ENST00000608158 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
CTCFL-215ENST00000608158 A6NN06 94 aa7.55□□□□□ -1.2
CTCFL-215ENST00000608158 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
CTCFL-215ENST00000608158 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
CTCFL-215ENST00000608158 K7ERS5 55 aa7.5□□□□□ -1.21
CTCFL-215ENST00000608158 MT2AP02795 61 aa7.5□□□□□ -1.21
CTCFL-215ENST00000608158 KRTAP9-8Q9BYQ0 159 aa7.49□□□□□ -1.21
CTCFL-215ENST00000608158 KRTAP12-1P59990 96 aa7.46□□□□□ -1.21
CTCFL-215ENST00000608158 MT1FP04733 61 aa7.46□□□□□ -1.22
CTCFL-215ENST00000608158 KRTAP12-2P59991 146 aa7.46□□□□□ -1.22
CTCFL-215ENST00000608158 SPINT4Q6UDR6 99 aa7.42□□□□□ -1.22
CTCFL-215ENST00000608158 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
CTCFL-215ENST00000608158 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.22
CTCFL-215ENST00000608158 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
CTCFL-215ENST00000608158 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
CTCFL-215ENST00000608158 KTN1-AS1Q86SY8 53 aa7.31□□□□□ -1.24
CTCFL-215ENST00000608158 ROMO1P60602 79 aa7.22□□□□□ -1.25
CTCFL-215ENST00000608158 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.26
CTCFL-215ENST00000608158 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
CTCFL-215ENST00000608158 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.26
CTCFL-215ENST00000608158 PRAC1Q96KF2 57 aa7.13□□□□□ -1.27
CTCFL-215ENST00000608158 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
CTCFL-215ENST00000608158 MT1BP07438 61 aa7.08□□□□□ -1.28
CTCFL-215ENST00000608158 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
CTCFL-215ENST00000608158 LCE2BO14633 110 aa7.01□□□□□ -1.29
CTCFL-215ENST00000608158 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
CTCFL-215ENST00000608158 MT1XP80297 61 aa6.86□□□□□ -1.31
CTCFL-215ENST00000608158 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
CTCFL-215ENST00000608158 USH2AO75445 5202 aa6.83□□□□□ -1.32
CTCFL-215ENST00000608158 TNP1P09430 55 aa6.81□□□□□ -1.32
CTCFL-215ENST00000608158 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
CTCFL-215ENST00000608158 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
CTCFL-215ENST00000608158 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
CTCFL-215ENST00000608158 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.34
CTCFL-215ENST00000608158 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
CTCFL-215ENST00000608158 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
CTCFL-215ENST00000608158 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
CTCFL-215ENST00000608158 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
CTCFL-215ENST00000608158 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
CTCFL-215ENST00000608158 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
CTCFL-215ENST00000608158 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
CTCFL-215ENST00000608158 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
CTCFL-215ENST00000608158 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
CTCFL-215ENST00000608158 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
CTCFL-215ENST00000608158 KMT2DO14686 5537 aa6.3□□□□□ -1.4
CTCFL-215ENST00000608158 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
CTCFL-215ENST00000608158 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
CTCFL-215ENST00000608158 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
CTCFL-215ENST00000608158 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
CTCFL-215ENST00000608158 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
CTCFL-215ENST00000608158 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.43
CTCFL-215ENST00000608158 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
CTCFL-215ENST00000608158 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
CTCFL-215ENST00000608158 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
CTCFL-215ENST00000608158 MT1EP04732 61 aa6.01□□□□□ -1.45
CTCFL-215ENST00000608158 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
CTCFL-215ENST00000608158 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
CTCFL-215ENST00000608158 MT1LQ93083 61 aa5.9□□□□□ -1.46
CTCFL-215ENST00000608158 LCE3CQ5T5A8 94 aa5.84□□□□□ -1.47
CTCFL-215ENST00000608158 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.48
CTCFL-215ENST00000608158 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
CTCFL-215ENST00000608158 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms