RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
LINC01954-201ENST00000607419 TRAV7A0A075B6U4 112 aa5.31□□□□□ -1.56
LINC01954-201ENST00000607419 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
LINC01954-201ENST00000607419 C5orf47Q569G3 176 aa5.31□□□□□ -1.56
LINC01954-201ENST00000607419 LOC101927531A0A1B0GV80 90 aa5.3□□□□□ -1.56
LINC01954-201ENST00000607419 MP68P56378 58 aa5.3□□□□□ -1.56
LINC01954-201ENST00000607419 HRES1P13985 223 aa5.28□□□□□ -1.56
LINC01954-201ENST00000607419 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
LINC01954-201ENST00000607419 H3BPC8 53 aa5.27□□□□□ -1.57
LINC01954-201ENST00000607419 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
LINC01954-201ENST00000607419 LINC00208Q96KT6 92 aa5.26□□□□□ -1.57
LINC01954-201ENST00000607419 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
LINC01954-201ENST00000607419 CYP4F30PQ9H0H9 118 aa5.26□□□□□ -1.57
LINC01954-201ENST00000607419 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
LINC01954-201ENST00000607419 SERP2Q8N6R1 65 aa5.25□□□□□ -1.57
LINC01954-201ENST00000607419 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
LINC01954-201ENST00000607419 M0R2T5 61 aa5.22□□□□□ -1.57
LINC01954-201ENST00000607419 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
LINC01954-201ENST00000607419 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
LINC01954-201ENST00000607419 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
LINC01954-201ENST00000607419 COX7CP15954 63 aa5.18□□□□□ -1.58
LINC01954-201ENST00000607419 C4orf26Q17RF5 130 aa5.18□□□□□ -1.58
LINC01954-201ENST00000607419 KLKP1Q107X0 134 aa5.17□□□□□ -1.58
LINC01954-201ENST00000607419 ANAPC13Q9BS18 74 aa5.17□□□□□ -1.58
LINC01954-201ENST00000607419 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
LINC01954-201ENST00000607419 C20orf197Q8N268 126 aa5.16□□□□□ -1.58
LINC01954-201ENST00000607419 SNURFQ9Y675 71 aa5.14□□□□□ -1.59
LINC01954-201ENST00000607419 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
LINC01954-201ENST00000607419 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
LINC01954-201ENST00000607419 A8MUN3 132 aa5.09□□□□□ -1.59
LINC01954-201ENST00000607419 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
LINC01954-201ENST00000607419 NDUFC1O43677 76 aa5.08□□□□□ -1.6
LINC01954-201ENST00000607419 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
LINC01954-201ENST00000607419 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
LINC01954-201ENST00000607419 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
LINC01954-201ENST00000607419 S4R3F8 94 aa5.03□□□□□ -1.6
LINC01954-201ENST00000607419 H7BZZ5 65 aa5.01□□□□□ -1.61
LINC01954-201ENST00000607419 CYSTM1Q9H1C7 97 aa5.01□□□□□ -1.61
LINC01954-201ENST00000607419 ACYP2P14621 99 aa5□□□□□ -1.61
LINC01954-201ENST00000607419 MT2AP02795 61 aa4.99□□□□□ -1.61
LINC01954-201ENST00000607419 LCA10Q71F78 164 aa4.99□□□□□ -1.61
LINC01954-201ENST00000607419 MT1FP04733 61 aa4.97□□□□□ -1.61
LINC01954-201ENST00000607419 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
LINC01954-201ENST00000607419 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
LINC01954-201ENST00000607419 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
LINC01954-201ENST00000607419 PCP4P48539 62 aa4.91□□□□□ -1.62
LINC01954-201ENST00000607419 CHKB-CPT1BH3BT56 60 aa4.9□□□□□ -1.63
LINC01954-201ENST00000607419 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
LINC01954-201ENST00000607419 TMEM258P61165 79 aa4.9□□□□□ -1.63
LINC01954-201ENST00000607419 SPTSSBQ8NFR3 76 aa4.89□□□□□ -1.63
LINC01954-201ENST00000607419 COA5Q86WW8 74 aa4.88□□□□□ -1.63
LINC01954-201ENST00000607419 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
LINC01954-201ENST00000607419 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
LINC01954-201ENST00000607419 H0YAA0 97 aa4.82□□□□□ -1.64
LINC01954-201ENST00000607419 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
LINC01954-201ENST00000607419 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
LINC01954-201ENST00000607419 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
LINC01954-201ENST00000607419 NEBP20929 6669 aa4.75□□□□□ -1.65
LINC01954-201ENST00000607419 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
LINC01954-201ENST00000607419 CRIPTQ9P021 101 aa4.72□□□□□ -1.65
LINC01954-201ENST00000607419 P0C880 135 aa4.69□□□□□ -1.66
LINC01954-201ENST00000607419 SEC61GP60059 68 aa4.68□□□□□ -1.66
LINC01954-201ENST00000607419 A0A1B0GU69 56 aa4.64□□□□□ -1.67
LINC01954-201ENST00000607419 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
LINC01954-201ENST00000607419 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
LINC01954-201ENST00000607419 R4GN34 69 aa4.63□□□□□ -1.67
LINC01954-201ENST00000607419 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
LINC01954-201ENST00000607419 M0QZ58 72 aa4.6□□□□□ -1.67
LINC01954-201ENST00000607419 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
LINC01954-201ENST00000607419 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
LINC01954-201ENST00000607419 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
LINC01954-201ENST00000607419 V9GYY9 64 aa4.58□□□□□ -1.68
LINC01954-201ENST00000607419 KRTAP5-9P26371 169 aa4.57□□□□□ -1.68
LINC01954-201ENST00000607419 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
LINC01954-201ENST00000607419 A0A1B0GU33 70 aa4.56□□□□□ -1.68
LINC01954-201ENST00000607419 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
LINC01954-201ENST00000607419 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
LINC01954-201ENST00000607419 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
LINC01954-201ENST00000607419 Q1T7F1 81 aa4.55□□□□□ -1.68
LINC01954-201ENST00000607419 KMT2DO14686 5537 aa4.54□□□□□ -1.68
LINC01954-201ENST00000607419 Q5VV11 94 aa4.53□□□□□ -1.68
LINC01954-201ENST00000607419 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
LINC01954-201ENST00000607419 MT1BP07438 61 aa4.5□□□□□ -1.69
LINC01954-201ENST00000607419 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
LINC01954-201ENST00000607419 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
LINC01954-201ENST00000607419 A6NN06 94 aa4.47□□□□□ -1.69
LINC01954-201ENST00000607419 PSPHP1O15172 72 aa4.46□□□□□ -1.7
LINC01954-201ENST00000607419 UQCR11O14957 56 aa4.45□□□□□ -1.7
LINC01954-201ENST00000607419 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
LINC01954-201ENST00000607419 A0A0D9SG42 100 aa4.41□□□□□ -1.7
LINC01954-201ENST00000607419 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
LINC01954-201ENST00000607419 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
LINC01954-201ENST00000607419 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
LINC01954-201ENST00000607419 A8MU10 97 aa4.37□□□□□ -1.71
LINC01954-201ENST00000607419 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
LINC01954-201ENST00000607419 SPRR2EP22531 72 aa4.35□□□□□ -1.71
LINC01954-201ENST00000607419 SPRR2BP35325 72 aa4.35□□□□□ -1.71
LINC01954-201ENST00000607419 SPRR2AP35326 72 aa4.35□□□□□ -1.71
LINC01954-201ENST00000607419 A6NED7 52 aa4.34□□□□□ -1.71
LINC01954-201ENST00000607419 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms