RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 MT2AP02795 61 aa6.82□□□□□ -1.32
CTSA-211ENST00000606066 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
CTSA-211ENST00000606066 A8MUN3 132 aa6.81□□□□□ -1.32
CTSA-211ENST00000606066 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
CTSA-211ENST00000606066 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
CTSA-211ENST00000606066 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
CTSA-211ENST00000606066 LCA10Q71F78 164 aa6.79□□□□□ -1.32
CTSA-211ENST00000606066 MT1FP04733 61 aa6.77□□□□□ -1.33
CTSA-211ENST00000606066 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
CTSA-211ENST00000606066 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
CTSA-211ENST00000606066 NDUFC1O43677 76 aa6.7□□□□□ -1.34
CTSA-211ENST00000606066 LCE2BO14633 110 aa6.69□□□□□ -1.34
CTSA-211ENST00000606066 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
CTSA-211ENST00000606066 KRTAP9-3Q9BYQ3 159 aa6.68□□□□□ -1.34
CTSA-211ENST00000606066 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
CTSA-211ENST00000606066 SNURFQ9Y675 71 aa6.65□□□□□ -1.34
CTSA-211ENST00000606066 C20orf197Q8N268 126 aa6.64□□□□□ -1.35
CTSA-211ENST00000606066 ACYP2P14621 99 aa6.6□□□□□ -1.35
CTSA-211ENST00000606066 COX7CP15954 63 aa6.58□□□□□ -1.36
CTSA-211ENST00000606066 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
CTSA-211ENST00000606066 H0YAA0 97 aa6.55□□□□□ -1.36
CTSA-211ENST00000606066 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
CTSA-211ENST00000606066 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
CTSA-211ENST00000606066 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
CTSA-211ENST00000606066 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
CTSA-211ENST00000606066 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
CTSA-211ENST00000606066 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
CTSA-211ENST00000606066 ADM2Q7Z4H4 148 aa6.47□□□□□ -1.37
CTSA-211ENST00000606066 NEBP20929 6669 aa6.45□□□□□ -1.38
CTSA-211ENST00000606066 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
CTSA-211ENST00000606066 H7BZZ5 65 aa6.4□□□□□ -1.38
CTSA-211ENST00000606066 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
CTSA-211ENST00000606066 Q5VV11 94 aa6.36□□□□□ -1.39
CTSA-211ENST00000606066 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
CTSA-211ENST00000606066 COA5Q86WW8 74 aa6.34□□□□□ -1.39
CTSA-211ENST00000606066 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
CTSA-211ENST00000606066 P0C880 135 aa6.33□□□□□ -1.4
CTSA-211ENST00000606066 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
CTSA-211ENST00000606066 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
CTSA-211ENST00000606066 R4GN34 69 aa6.31□□□□□ -1.4
CTSA-211ENST00000606066 MT1BP07438 61 aa6.28□□□□□ -1.4
CTSA-211ENST00000606066 M0QZ58 72 aa6.25□□□□□ -1.41
CTSA-211ENST00000606066 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
CTSA-211ENST00000606066 SEC61GP60059 68 aa6.2□□□□□ -1.42
CTSA-211ENST00000606066 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
CTSA-211ENST00000606066 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
CTSA-211ENST00000606066 A6NN06 94 aa6.16□□□□□ -1.42
CTSA-211ENST00000606066 PLAC4Q8WY50 150 aa6.16□□□□□ -1.42
CTSA-211ENST00000606066 TMEM258P61165 79 aa6.15□□□□□ -1.42
CTSA-211ENST00000606066 LINC01554Q52M75 96 aa6.15□□□□□ -1.42
CTSA-211ENST00000606066 KMT2DO14686 5537 aa6.12□□□□□ -1.43
CTSA-211ENST00000606066 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
CTSA-211ENST00000606066 KRTAP20-1Q3LI63 56 aa6.1□□□□□ -1.43
CTSA-211ENST00000606066 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
CTSA-211ENST00000606066 A0A1B0GU69 56 aa6.04□□□□□ -1.44
CTSA-211ENST00000606066 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
CTSA-211ENST00000606066 A0A1B0GU33 70 aa6.02□□□□□ -1.45
CTSA-211ENST00000606066 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
CTSA-211ENST00000606066 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
CTSA-211ENST00000606066 MT1XP80297 61 aa5.96□□□□□ -1.46
CTSA-211ENST00000606066 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
CTSA-211ENST00000606066 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
CTSA-211ENST00000606066 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.46
CTSA-211ENST00000606066 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.46
CTSA-211ENST00000606066 A0A0D9SG42 100 aa5.89□□□□□ -1.47
CTSA-211ENST00000606066 PCP4P48539 62 aa5.88□□□□□ -1.47
CTSA-211ENST00000606066 SMIM26A0A096LP01 95 aa5.87□□□□□ -1.47
CTSA-211ENST00000606066 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
CTSA-211ENST00000606066 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
CTSA-211ENST00000606066 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
CTSA-211ENST00000606066 V9GYY9 64 aa5.8□□□□□ -1.48
CTSA-211ENST00000606066 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
CTSA-211ENST00000606066 UQCR11O14957 56 aa5.76□□□□□ -1.49
CTSA-211ENST00000606066 A8MU10 97 aa5.75□□□□□ -1.49
CTSA-211ENST00000606066 Q1T7F1 81 aa5.73□□□□□ -1.49
CTSA-211ENST00000606066 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
CTSA-211ENST00000606066 SPRR2EP22531 72 aa5.69□□□□□ -1.5
CTSA-211ENST00000606066 SPRR2BP35325 72 aa5.69□□□□□ -1.5
CTSA-211ENST00000606066 SPRR2AP35326 72 aa5.69□□□□□ -1.5
CTSA-211ENST00000606066 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
CTSA-211ENST00000606066 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
CTSA-211ENST00000606066 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
CTSA-211ENST00000606066 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
CTSA-211ENST00000606066 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
CTSA-211ENST00000606066 PSPHP1O15172 72 aa5.67□□□□□ -1.5
CTSA-211ENST00000606066 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
CTSA-211ENST00000606066 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
CTSA-211ENST00000606066 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
CTSA-211ENST00000606066 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
CTSA-211ENST00000606066 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
CTSA-211ENST00000606066 K7ERS5 55 aa5.54□□□□□ -1.52
CTSA-211ENST00000606066 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
CTSA-211ENST00000606066 A6NED7 52 aa5.52□□□□□ -1.53
CTSA-211ENST00000606066 SPRR2DP22532 72 aa5.5□□□□□ -1.53
CTSA-211ENST00000606066 TNP1P09430 55 aa5.48□□□□□ -1.53
CTSA-211ENST00000606066 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
CTSA-211ENST00000606066 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
CTSA-211ENST00000606066 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
CTSA-211ENST00000606066 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
CTSA-211ENST00000606066 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms