RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 MUC17Q685J3 4493 aa11.6□□□□□ -0.55
PPFIA3-212ENST00000602897 SEC61BP60468 96 aaKnown RBP11.58□□□□□ -0.56
PPFIA3-212ENST00000602897 CHKB-CPT1BH3BT56 60 aa11.54□□□□□ -0.56
PPFIA3-212ENST00000602897 PRR15LQ9BU68 103 aa11.54□□□□□ -0.56
PPFIA3-212ENST00000602897 LINC01558Q9Y6Z2 57 aa11.54□□□□□ -0.56
PPFIA3-212ENST00000602897 COX6B2Q6YFQ2 88 aa11.53□□□□□ -0.56
PPFIA3-212ENST00000602897 SEC61GP60059 68 aa11.46□□□□□ -0.57
PPFIA3-212ENST00000602897 KRTAP3-1Q9BYR8 98 aa11.46□□□□□ -0.57
PPFIA3-212ENST00000602897 KRTAP4-1Q9BYQ7 146 aa11.44□□□□□ -0.58
PPFIA3-212ENST00000602897 CDC42SE1Q9NRR8 79 aa11.44□□□□□ -0.58
PPFIA3-212ENST00000602897 FAT4Q6V0I7 4981 aa11.42□□□□□ -0.58
PPFIA3-212ENST00000602897 A6NED7 52 aa11.39□□□□□ -0.59
PPFIA3-212ENST00000602897 LCA10Q71F78 164 aa11.35□□□□□ -0.59
PPFIA3-212ENST00000602897 KTN1-AS1Q86SY8 53 aa11.35□□□□□ -0.59
PPFIA3-212ENST00000602897 LCE2AQ5TA79 106 aaPredicted RBP11.35□□□□□ -0.59
PPFIA3-212ENST00000602897 SPTSSBQ8NFR3 76 aa11.34□□□□□ -0.59
PPFIA3-212ENST00000602897 RBM12B-AS1Q9P1G2 102 aa11.33□□□□□ -0.6
PPFIA3-212ENST00000602897 A6NN06 94 aa11.27□□□□□ -0.6
PPFIA3-212ENST00000602897 A8MU10 97 aa11.24□□□□□ -0.61
PPFIA3-212ENST00000602897 H1FX-AS1Q4G0G2 97 aa11.24□□□□□ -0.61
PPFIA3-212ENST00000602897 S4R3F8 94 aa11.14□□□□□ -0.63
PPFIA3-212ENST00000602897 KRTAP19-2Q3LHN2 52 aa11.11□□□□□ -0.63
PPFIA3-212ENST00000602897 LCE2CQ5TA81 110 aa11.11□□□□□ -0.63
PPFIA3-212ENST00000602897 A0A1B0GU69 56 aa11.06□□□□□ -0.64
PPFIA3-212ENST00000602897 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
PPFIA3-212ENST00000602897 MT1HP80294 61 aa10.98□□□□□ -0.65
PPFIA3-212ENST00000602897 SPATA8Q6RVD6 105 aa10.97□□□□□ -0.65
PPFIA3-212ENST00000602897 KRTAP9-2Q9BYQ4 174 aa10.96□□□□□ -0.65
PPFIA3-212ENST00000602897 CSAG1Q6PB30 78 aa10.93□□□□□ -0.66
PPFIA3-212ENST00000602897 UQCR11O14957 56 aa10.87□□□□□ -0.67
PPFIA3-212ENST00000602897 M0R2T5 61 aa10.83□□□□□ -0.68
PPFIA3-212ENST00000602897 MIR22HGQ0VDD5 57 aa10.8□□□□□ -0.68
PPFIA3-212ENST00000602897 KRTAP10-6P60371 365 aaPredicted RBP10.74□□□□□ -0.69
PPFIA3-212ENST00000602897 H0YAA0 97 aa10.73□□□□□ -0.69
PPFIA3-212ENST00000602897 LORP23490 312 aaPredicted RBP10.73□□□□□ -0.69
PPFIA3-212ENST00000602897 FLGP20930 4061 aaPredicted RBP10.72□□□□□ -0.69
PPFIA3-212ENST00000602897 A0A1B0GU33 70 aa10.7□□□□□ -0.7
PPFIA3-212ENST00000602897 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
PPFIA3-212ENST00000602897 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
PPFIA3-212ENST00000602897 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
PPFIA3-212ENST00000602897 P0C880 135 aa10.55□□□□□ -0.72
PPFIA3-212ENST00000602897 KRTAP9-6A0A140TA67 174 aa10.55□□□□□ -0.72
PPFIA3-212ENST00000602897 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
PPFIA3-212ENST00000602897 PRAC1Q96KF2 57 aa10.51□□□□□ -0.73
PPFIA3-212ENST00000602897 M0QZ58 72 aa10.43□□□□□ -0.74
PPFIA3-212ENST00000602897 FSIP2Q5CZC0 6907 aa10.4□□□□□ -0.74
PPFIA3-212ENST00000602897 KRTAP9-8Q9BYQ0 159 aa10.4□□□□□ -0.74
PPFIA3-212ENST00000602897 CRCT1Q9UGL9 99 aa10.38□□□□□ -0.75
PPFIA3-212ENST00000602897 KRTAP13-4Q3LI77 160 aa10.35□□□□□ -0.75
PPFIA3-212ENST00000602897 R4GN34 69 aa10.28□□□□□ -0.76
PPFIA3-212ENST00000602897 MT2AP02795 61 aa10.27□□□□□ -0.77
PPFIA3-212ENST00000602897 CRIPTQ9P021 101 aa10.27□□□□□ -0.77
PPFIA3-212ENST00000602897 K7ERS5 55 aa10.22□□□□□ -0.77
PPFIA3-212ENST00000602897 MT1FP04733 61 aa10.19□□□□□ -0.78
PPFIA3-212ENST00000602897 KRTAP10-10P60014 251 aa10.18□□□□□ -0.78
PPFIA3-212ENST00000602897 A0A0D9SG42 100 aa10.17□□□□□ -0.78
PPFIA3-212ENST00000602897 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
PPFIA3-212ENST00000602897 KRTAP9-3Q9BYQ3 159 aa10.07□□□□□ -0.8
PPFIA3-212ENST00000602897 USH2AO75445 5202 aa10.04□□□□□ -0.8
PPFIA3-212ENST00000602897 KRTAP12-1P59990 96 aa10.02□□□□□ -0.81
PPFIA3-212ENST00000602897 LCE2BO14633 110 aa10□□□□□ -0.81
PPFIA3-212ENST00000602897 KRTAP12-2P59991 146 aa9.96□□□□□ -0.81
PPFIA3-212ENST00000602897 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.81
PPFIA3-212ENST00000602897 SPRR2GQ9BYE4 73 aa9.95□□□□□ -0.82
PPFIA3-212ENST00000602897 SSPOA2VEC9 5147 aa9.91□□□□□ -0.82
PPFIA3-212ENST00000602897 ROMO1P60602 79 aa9.9□□□□□ -0.82
PPFIA3-212ENST00000602897 KRTAP19-1Q8IUB9 90 aa9.85□□□□□ -0.83
PPFIA3-212ENST00000602897 FCGBPQ9Y6R7 5405 aaPredicted RBP9.69□□□□□ -0.86
PPFIA3-212ENST00000602897 KRTAP19-8Q3LI54 63 aa9.68□□□□□ -0.86
PPFIA3-212ENST00000602897 H3BS24 57 aa9.67□□□□□ -0.86
PPFIA3-212ENST00000602897 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.66□□□□□ -0.86
PPFIA3-212ENST00000602897 PLAC4Q8WY50 150 aa9.66□□□□□ -0.86
PPFIA3-212ENST00000602897 CAMK2N1Q7Z7J9 78 aa9.64□□□□□ -0.87
PPFIA3-212ENST00000602897 KRTAP19-6Q3LI70 58 aa9.62□□□□□ -0.87
PPFIA3-212ENST00000602897 KRTAP9-7A8MTY7 169 aa9.5□□□□□ -0.89
PPFIA3-212ENST00000602897 MT1BP07438 61 aa9.48□□□□□ -0.89
PPFIA3-212ENST00000602897 C10orf95Q9H7T3 257 aa9.47□□□□□ -0.89
PPFIA3-212ENST00000602897 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
PPFIA3-212ENST00000602897 KRTAP15-1Q3LI76 137 aa9.27□□□□□ -0.92
PPFIA3-212ENST00000602897 TNP1P09430 55 aa9.22□□□□□ -0.93
PPFIA3-212ENST00000602897 MT1XP80297 61 aa9.19□□□□□ -0.94
PPFIA3-212ENST00000602897 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
PPFIA3-212ENST00000602897 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
PPFIA3-212ENST00000602897 SYNE2Q8WXH0 6885 aaKnown RBP9.18□□□□□ -0.94
PPFIA3-212ENST00000602897 KRTAP23-1A1A580 65 aa9.07□□□□□ -0.96
PPFIA3-212ENST00000602897 KRTAP6-3Q3LI67 103 aa9.06□□□□□ -0.96
PPFIA3-212ENST00000602897 PP632Q6XCG6 107 aa9.06□□□□□ -0.96
PPFIA3-212ENST00000602897 NDUFAF8A1L188 74 aa8.95□□□□□ -0.98
PPFIA3-212ENST00000602897 KRTAP10-7P60409 375 aaPredicted RBP8.79□□□□□ -1
PPFIA3-212ENST00000602897 KRTAP10-12P60413 245 aa8.77□□□□□ -1.01
PPFIA3-212ENST00000602897 LCE3AQ5TA76 89 aa8.73□□□□□ -1.01
PPFIA3-212ENST00000602897 KRTAP5-9P26371 169 aa8.69□□□□□ -1.02
PPFIA3-212ENST00000602897 MUC12Q9UKN1 5478 aa8.65□□□□□ -1.03
PPFIA3-212ENST00000602897 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
PPFIA3-212ENST00000602897 KMT2DO14686 5537 aa8.6□□□□□ -1.03
PPFIA3-212ENST00000602897 NEBP20929 6669 aa8.59□□□□□ -1.03
PPFIA3-212ENST00000602897 LUZP6Q538Z0 58 aa8.5□□□□□ -1.05
PPFIA3-212ENST00000602897 SPRR2FQ96RM1 72 aa8.5□□□□□ -1.05
PPFIA3-212ENST00000602897 MDN1Q9NU22 5596 aa8.48□□□□□ -1.05
PPFIA3-212ENST00000602897 KRTAP4-8A0A0G2JLE6 195 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms