RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
PPFIA3-210ENST00000602800 SERP2Q8N6R1 65 aa9.31□□□□□ -0.92
PPFIA3-210ENST00000602800 H3BPC8 53 aa9.3□□□□□ -0.92
PPFIA3-210ENST00000602800 PCP4P48539 62 aa9.3□□□□□ -0.92
PPFIA3-210ENST00000602800 C1orf64Q8NEQ6 169 aa9.3□□□□□ -0.92
PPFIA3-210ENST00000602800 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
PPFIA3-210ENST00000602800 CYP4F30PQ9H0H9 118 aa9.29□□□□□ -0.92
PPFIA3-210ENST00000602800 COX7CP15954 63 aa9.25□□□□□ -0.93
PPFIA3-210ENST00000602800 KRTAP6-3Q3LI67 103 aa9.22□□□□□ -0.93
PPFIA3-210ENST00000602800 C4orf26Q17RF5 130 aa9.18□□□□□ -0.94
PPFIA3-210ENST00000602800 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
PPFIA3-210ENST00000602800 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
PPFIA3-210ENST00000602800 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
PPFIA3-210ENST00000602800 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
PPFIA3-210ENST00000602800 NDUFC1O43677 76 aa9.06□□□□□ -0.96
PPFIA3-210ENST00000602800 SNURFQ9Y675 71 aa9.06□□□□□ -0.96
PPFIA3-210ENST00000602800 NEBP20929 6669 aa9.03□□□□□ -0.96
PPFIA3-210ENST00000602800 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
PPFIA3-210ENST00000602800 A8MUN3 132 aa9□□□□□ -0.97
PPFIA3-210ENST00000602800 S4R3F8 94 aa8.92□□□□□ -0.98
PPFIA3-210ENST00000602800 TMEM258P61165 79 aa8.9□□□□□ -0.98
PPFIA3-210ENST00000602800 DMAC1Q96GE9 116 aa8.9□□□□□ -0.98
PPFIA3-210ENST00000602800 H7BZZ5 65 aa8.89□□□□□ -0.99
PPFIA3-210ENST00000602800 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
PPFIA3-210ENST00000602800 MUC12Q9UKN1 5478 aa8.88□□□□□ -0.99
PPFIA3-210ENST00000602800 ATP5EP56381 51 aaPredicted RBP8.87□□□□□ -0.99
PPFIA3-210ENST00000602800 CYSTM1Q9H1C7 97 aa8.84□□□□□ -0.99
PPFIA3-210ENST00000602800 ACYP2P14621 99 aa8.83□□□□□ -1
PPFIA3-210ENST00000602800 LCA10Q71F78 164 aa8.83□□□□□ -1
PPFIA3-210ENST00000602800 A6NN06 94 aa8.82□□□□□ -1
PPFIA3-210ENST00000602800 CSAG1Q6PB30 78 aa8.8□□□□□ -1
PPFIA3-210ENST00000602800 KRTAP20-1Q3LI63 56 aa8.76□□□□□ -1.01
PPFIA3-210ENST00000602800 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
PPFIA3-210ENST00000602800 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
PPFIA3-210ENST00000602800 Q5VV11 94 aa8.7□□□□□ -1.02
PPFIA3-210ENST00000602800 MT1BP07438 61 aa8.69□□□□□ -1.02
PPFIA3-210ENST00000602800 SPTSSBQ8NFR3 76 aa8.66□□□□□ -1.02
PPFIA3-210ENST00000602800 KRTAP19-8Q3LI54 63 aa8.62□□□□□ -1.03
PPFIA3-210ENST00000602800 SERP1Q9Y6X1 66 aa8.61□□□□□ -1.03
PPFIA3-210ENST00000602800 MDN1Q9NU22 5596 aa8.61□□□□□ -1.03
PPFIA3-210ENST00000602800 KMT2DO14686 5537 aa8.6□□□□□ -1.03
PPFIA3-210ENST00000602800 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
PPFIA3-210ENST00000602800 SPRR2GQ9BYE4 73 aa8.6□□□□□ -1.03
PPFIA3-210ENST00000602800 KRTAP5-9P26371 169 aa8.59□□□□□ -1.03
PPFIA3-210ENST00000602800 COA5Q86WW8 74 aa8.59□□□□□ -1.03
PPFIA3-210ENST00000602800 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
PPFIA3-210ENST00000602800 H0YAA0 97 aa8.52□□□□□ -1.05
PPFIA3-210ENST00000602800 ADM2Q7Z4H4 148 aa8.45□□□□□ -1.06
PPFIA3-210ENST00000602800 KRTAP2-3P0C7H8 128 aa8.41□□□□□ -1.06
PPFIA3-210ENST00000602800 KRTAP2-4Q9BYR9 128 aa8.41□□□□□ -1.06
PPFIA3-210ENST00000602800 SMIM26A0A096LP01 95 aa8.38□□□□□ -1.07
PPFIA3-210ENST00000602800 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
PPFIA3-210ENST00000602800 SEC61GP60059 68 aa8.31□□□□□ -1.08
PPFIA3-210ENST00000602800 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
PPFIA3-210ENST00000602800 V9GYY9 64 aa8.31□□□□□ -1.08
PPFIA3-210ENST00000602800 P0C880 135 aa8.29□□□□□ -1.08
PPFIA3-210ENST00000602800 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.09
PPFIA3-210ENST00000602800 SPRR2EP22531 72 aa8.25□□□□□ -1.09
PPFIA3-210ENST00000602800 SPRR2BP35325 72 aa8.25□□□□□ -1.09
PPFIA3-210ENST00000602800 SPRR2AP35326 72 aa8.25□□□□□ -1.09
PPFIA3-210ENST00000602800 Q1T7F1 81 aa8.22□□□□□ -1.09
PPFIA3-210ENST00000602800 R4GN34 69 aa8.21□□□□□ -1.1
PPFIA3-210ENST00000602800 A0A1B0GU69 56 aa8.17□□□□□ -1.1
PPFIA3-210ENST00000602800 LINC01558Q9Y6Z2 57 aa8.17□□□□□ -1.1
PPFIA3-210ENST00000602800 M0QZ58 72 aa8.16□□□□□ -1.1
PPFIA3-210ENST00000602800 PRO2289Q9P1D8 64 aa8.16□□□□□ -1.1
PPFIA3-210ENST00000602800 PRR15LQ9BU68 103 aa8.13□□□□□ -1.11
PPFIA3-210ENST00000602800 KRTAP2-2Q9BYT5 123 aa8.12□□□□□ -1.11
PPFIA3-210ENST00000602800 KRTAP2-1Q9BYU5 128 aa8.12□□□□□ -1.11
PPFIA3-210ENST00000602800 KRTAP8-1Q8IUC2 63 aa8.1□□□□□ -1.11
PPFIA3-210ENST00000602800 A0A1B0GU33 70 aa8.06□□□□□ -1.12
PPFIA3-210ENST00000602800 LCE1AQ5T7P2 110 aa8.06□□□□□ -1.12
PPFIA3-210ENST00000602800 MT1XP80297 61 aa8.04□□□□□ -1.12
PPFIA3-210ENST00000602800 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
PPFIA3-210ENST00000602800 PLAC4Q8WY50 150 aa8□□□□□ -1.13
PPFIA3-210ENST00000602800 SPRR2DP22532 72 aa7.99□□□□□ -1.13
PPFIA3-210ENST00000602800 PSPHP1O15172 72 aa7.98□□□□□ -1.13
PPFIA3-210ENST00000602800 KRTAP12-2P59991 146 aa7.95□□□□□ -1.14
PPFIA3-210ENST00000602800 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
PPFIA3-210ENST00000602800 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.14
PPFIA3-210ENST00000602800 KRTAP4-8A0A0G2JLE6 195 aa7.85□□□□□ -1.15
PPFIA3-210ENST00000602800 UQCR11O14957 56 aa7.85□□□□□ -1.15
PPFIA3-210ENST00000602800 KRTAP4-8Q9BYQ9 185 aa7.85□□□□□ -1.15
PPFIA3-210ENST00000602800 A0A0D9SG42 100 aa7.83□□□□□ -1.16
PPFIA3-210ENST00000602800 A6NED7 52 aa7.82□□□□□ -1.16
PPFIA3-210ENST00000602800 LCE3BQ5TA77 95 aa7.79□□□□□ -1.16
PPFIA3-210ENST00000602800 A8MU10 97 aa7.71□□□□□ -1.18
PPFIA3-210ENST00000602800 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.18
PPFIA3-210ENST00000602800 SPINT4Q6UDR6 99 aa7.7□□□□□ -1.18
PPFIA3-210ENST00000602800 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
PPFIA3-210ENST00000602800 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
PPFIA3-210ENST00000602800 KRTAP12-1P59990 96 aa7.66□□□□□ -1.18
PPFIA3-210ENST00000602800 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
PPFIA3-210ENST00000602800 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
PPFIA3-210ENST00000602800 GPR98Q8WXG9 6306 aa7.64□□□□□ -1.19
PPFIA3-210ENST00000602800 KRTAP10-12P60413 245 aa7.63□□□□□ -1.19
PPFIA3-210ENST00000602800 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
PPFIA3-210ENST00000602800 K7ERS5 55 aa7.52□□□□□ -1.21
PPFIA3-210ENST00000602800 PRO0628Q9UI54 55 aa7.52□□□□□ -1.21
PPFIA3-210ENST00000602800 KRTAP4-9Q9BYQ8 210 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms