RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 COA5Q86WW8 74 aa7.29□□□□□ -1.24
ZNF548-212ENST00000602086 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
ZNF548-212ENST00000602086 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
ZNF548-212ENST00000602086 SMIM26A0A096LP01 95 aa7.18□□□□□ -1.26
ZNF548-212ENST00000602086 KRTAP19-2Q3LHN2 52 aa7.17□□□□□ -1.26
ZNF548-212ENST00000602086 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
ZNF548-212ENST00000602086 S4R3F8 94 aa7.13□□□□□ -1.27
ZNF548-212ENST00000602086 LCA10Q71F78 164 aa7.08□□□□□ -1.28
ZNF548-212ENST00000602086 V9GYY9 64 aa7.08□□□□□ -1.28
ZNF548-212ENST00000602086 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
ZNF548-212ENST00000602086 Q1T7F1 81 aa7.06□□□□□ -1.28
ZNF548-212ENST00000602086 LCE2DQ5TA82 110 aaPredicted RBP7.03□□□□□ -1.28
ZNF548-212ENST00000602086 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
ZNF548-212ENST00000602086 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
ZNF548-212ENST00000602086 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
ZNF548-212ENST00000602086 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
ZNF548-212ENST00000602086 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
ZNF548-212ENST00000602086 FLGP20930 4061 aaPredicted RBP7□□□□□ -1.29
ZNF548-212ENST00000602086 PRR15LQ9BU68 103 aa6.92□□□□□ -1.3
ZNF548-212ENST00000602086 H0YAA0 97 aa6.91□□□□□ -1.3
ZNF548-212ENST00000602086 SEC61GP60059 68 aa6.91□□□□□ -1.3
ZNF548-212ENST00000602086 A0A1B0GU69 56 aa6.9□□□□□ -1.3
ZNF548-212ENST00000602086 MT1HP80294 61 aa6.87□□□□□ -1.31
ZNF548-212ENST00000602086 PSPHP1O15172 72 aa6.83□□□□□ -1.32
ZNF548-212ENST00000602086 Q5VV11 94 aa6.83□□□□□ -1.32
ZNF548-212ENST00000602086 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
ZNF548-212ENST00000602086 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
ZNF548-212ENST00000602086 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
ZNF548-212ENST00000602086 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
ZNF548-212ENST00000602086 M0R2T5 61 aa6.75□□□□□ -1.33
ZNF548-212ENST00000602086 A0A1B0GU33 70 aa6.72□□□□□ -1.33
ZNF548-212ENST00000602086 P0C880 135 aa6.72□□□□□ -1.33
ZNF548-212ENST00000602086 UQCR11O14957 56 aa6.71□□□□□ -1.34
ZNF548-212ENST00000602086 A6NED7 52 aa6.66□□□□□ -1.34
ZNF548-212ENST00000602086 M0QZ58 72 aa6.65□□□□□ -1.34
ZNF548-212ENST00000602086 CRIPTQ9P021 101 aa6.65□□□□□ -1.34
ZNF548-212ENST00000602086 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
ZNF548-212ENST00000602086 KRTAP9-8Q9BYQ0 159 aa6.62□□□□□ -1.35
ZNF548-212ENST00000602086 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
ZNF548-212ENST00000602086 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
ZNF548-212ENST00000602086 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
ZNF548-212ENST00000602086 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
ZNF548-212ENST00000602086 MT2AP02795 61 aa6.58□□□□□ -1.36
ZNF548-212ENST00000602086 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
ZNF548-212ENST00000602086 R4GN34 69 aa6.56□□□□□ -1.36
ZNF548-212ENST00000602086 MT1FP04733 61 aa6.52□□□□□ -1.37
ZNF548-212ENST00000602086 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
ZNF548-212ENST00000602086 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
ZNF548-212ENST00000602086 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
ZNF548-212ENST00000602086 USH2AO75445 5202 aa6.46□□□□□ -1.38
ZNF548-212ENST00000602086 SSPOA2VEC9 5147 aa6.46□□□□□ -1.38
ZNF548-212ENST00000602086 A6NN06 94 aa6.43□□□□□ -1.38
ZNF548-212ENST00000602086 A8MU10 97 aa6.43□□□□□ -1.38
ZNF548-212ENST00000602086 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
ZNF548-212ENST00000602086 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
ZNF548-212ENST00000602086 A0A0D9SG42 100 aa6.39□□□□□ -1.39
ZNF548-212ENST00000602086 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
ZNF548-212ENST00000602086 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
ZNF548-212ENST00000602086 K7ERS5 55 aa6.35□□□□□ -1.39
ZNF548-212ENST00000602086 LINC01554Q52M75 96 aa6.35□□□□□ -1.39
ZNF548-212ENST00000602086 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
ZNF548-212ENST00000602086 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
ZNF548-212ENST00000602086 LCE2BO14633 110 aa6.3□□□□□ -1.4
ZNF548-212ENST00000602086 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
ZNF548-212ENST00000602086 SPINT4Q6UDR6 99 aa6.27□□□□□ -1.41
ZNF548-212ENST00000602086 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
ZNF548-212ENST00000602086 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
ZNF548-212ENST00000602086 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.42
ZNF548-212ENST00000602086 MT1BP07438 61 aa6.19□□□□□ -1.42
ZNF548-212ENST00000602086 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
ZNF548-212ENST00000602086 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
ZNF548-212ENST00000602086 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
ZNF548-212ENST00000602086 ROMO1P60602 79 aa6.06□□□□□ -1.44
ZNF548-212ENST00000602086 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
ZNF548-212ENST00000602086 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
ZNF548-212ENST00000602086 MT1XP80297 61 aa5.97□□□□□ -1.45
ZNF548-212ENST00000602086 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
ZNF548-212ENST00000602086 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
ZNF548-212ENST00000602086 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
ZNF548-212ENST00000602086 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
ZNF548-212ENST00000602086 TNP1P09430 55 aa5.86□□□□□ -1.47
ZNF548-212ENST00000602086 NEBP20929 6669 aa5.86□□□□□ -1.47
ZNF548-212ENST00000602086 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
ZNF548-212ENST00000602086 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
ZNF548-212ENST00000602086 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
ZNF548-212ENST00000602086 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
ZNF548-212ENST00000602086 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
ZNF548-212ENST00000602086 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
ZNF548-212ENST00000602086 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
ZNF548-212ENST00000602086 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
ZNF548-212ENST00000602086 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
ZNF548-212ENST00000602086 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
ZNF548-212ENST00000602086 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
ZNF548-212ENST00000602086 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
ZNF548-212ENST00000602086 KMT2DO14686 5537 aa5.53□□□□□ -1.52
ZNF548-212ENST00000602086 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
ZNF548-212ENST00000602086 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
ZNF548-212ENST00000602086 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
ZNF548-212ENST00000602086 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
ZNF548-212ENST00000602086 SPRR2EP22531 72 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms