RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 MP68P56378 58 aa4.74□□□□□ -1.65
HIF3A-219ENST00000600879 TRAV7A0A075B6U4 112 aa4.73□□□□□ -1.65
HIF3A-219ENST00000600879 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
HIF3A-219ENST00000600879 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
HIF3A-219ENST00000600879 LINC00208Q96KT6 92 aa4.72□□□□□ -1.65
HIF3A-219ENST00000600879 C1orf64Q8NEQ6 169 aa4.7□□□□□ -1.66
HIF3A-219ENST00000600879 CYP4F30PQ9H0H9 118 aa4.7□□□□□ -1.66
HIF3A-219ENST00000600879 H3BPC8 53 aa4.69□□□□□ -1.66
HIF3A-219ENST00000600879 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
HIF3A-219ENST00000600879 SERP2Q8N6R1 65 aa4.67□□□□□ -1.66
HIF3A-219ENST00000600879 C4orf26Q17RF5 130 aa4.66□□□□□ -1.66
HIF3A-219ENST00000600879 KMT2DO14686 5537 aa4.65□□□□□ -1.67
HIF3A-219ENST00000600879 A6NN06 94 aa4.64□□□□□ -1.67
HIF3A-219ENST00000600879 KLKP1Q107X0 134 aa4.63□□□□□ -1.67
HIF3A-219ENST00000600879 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
HIF3A-219ENST00000600879 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
HIF3A-219ENST00000600879 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
HIF3A-219ENST00000600879 COX7CP15954 63 aa4.61□□□□□ -1.67
HIF3A-219ENST00000600879 C20orf197Q8N268 126 aa4.61□□□□□ -1.67
HIF3A-219ENST00000600879 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
HIF3A-219ENST00000600879 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
HIF3A-219ENST00000600879 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
HIF3A-219ENST00000600879 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
HIF3A-219ENST00000600879 MT1BP07438 61 aa4.55□□□□□ -1.68
HIF3A-219ENST00000600879 A8MUN3 132 aa4.53□□□□□ -1.68
HIF3A-219ENST00000600879 S4R3F8 94 aa4.52□□□□□ -1.69
HIF3A-219ENST00000600879 Q5VV11 94 aa4.51□□□□□ -1.69
HIF3A-219ENST00000600879 CCDC179H3BU77 68 aa4.5□□□□□ -1.69
HIF3A-219ENST00000600879 NDUFC1O43677 76 aa4.5□□□□□ -1.69
HIF3A-219ENST00000600879 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
HIF3A-219ENST00000600879 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
HIF3A-219ENST00000600879 SPANXA2-OT1Q8N9U9 137 aa4.49□□□□□ -1.69
HIF3A-219ENST00000600879 SPRR2EP22531 72 aa4.48□□□□□ -1.69
HIF3A-219ENST00000600879 SPRR2BP35325 72 aa4.48□□□□□ -1.69
HIF3A-219ENST00000600879 SPRR2AP35326 72 aa4.48□□□□□ -1.69
HIF3A-219ENST00000600879 LCA10Q71F78 164 aa4.48□□□□□ -1.69
HIF3A-219ENST00000600879 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
HIF3A-219ENST00000600879 H7BZZ5 65 aa4.46□□□□□ -1.7
HIF3A-219ENST00000600879 ACYP2P14621 99 aa4.46□□□□□ -1.7
HIF3A-219ENST00000600879 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
HIF3A-219ENST00000600879 CSAG1Q6PB30 78 aa4.45□□□□□ -1.7
HIF3A-219ENST00000600879 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
HIF3A-219ENST00000600879 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
HIF3A-219ENST00000600879 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
HIF3A-219ENST00000600879 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
HIF3A-219ENST00000600879 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
HIF3A-219ENST00000600879 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
HIF3A-219ENST00000600879 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
HIF3A-219ENST00000600879 COA5Q86WW8 74 aa4.37□□□□□ -1.71
HIF3A-219ENST00000600879 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
HIF3A-219ENST00000600879 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
HIF3A-219ENST00000600879 PCP4P48539 62 aa4.35□□□□□ -1.71
HIF3A-219ENST00000600879 TMEM258P61165 79 aa4.35□□□□□ -1.71
HIF3A-219ENST00000600879 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
HIF3A-219ENST00000600879 SPRR2DP22532 72 aa4.33□□□□□ -1.72
HIF3A-219ENST00000600879 H0YAA0 97 aa4.29□□□□□ -1.72
HIF3A-219ENST00000600879 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
HIF3A-219ENST00000600879 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
HIF3A-219ENST00000600879 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
HIF3A-219ENST00000600879 P0C880 135 aa4.22□□□□□ -1.73
HIF3A-219ENST00000600879 KRTAP3-2Q9BYR7 98 aa4.22□□□□□ -1.73
HIF3A-219ENST00000600879 SERP1Q9Y6X1 66 aa4.22□□□□□ -1.73
HIF3A-219ENST00000600879 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
HIF3A-219ENST00000600879 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
HIF3A-219ENST00000600879 SEC61GP60059 68 aa4.18□□□□□ -1.74
HIF3A-219ENST00000600879 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
HIF3A-219ENST00000600879 MT1XP80297 61 aa4.17□□□□□ -1.74
HIF3A-219ENST00000600879 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
HIF3A-219ENST00000600879 R4GN34 69 aa4.16□□□□□ -1.74
HIF3A-219ENST00000600879 A0A1B0GU69 56 aa4.14□□□□□ -1.75
HIF3A-219ENST00000600879 M0QZ58 72 aa4.14□□□□□ -1.75
HIF3A-219ENST00000600879 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
HIF3A-219ENST00000600879 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
HIF3A-219ENST00000600879 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
HIF3A-219ENST00000600879 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
HIF3A-219ENST00000600879 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
HIF3A-219ENST00000600879 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
HIF3A-219ENST00000600879 LINC01554Q52M75 96 aa4.08□□□□□ -1.76
HIF3A-219ENST00000600879 SMIM26A0A096LP01 95 aa4.07□□□□□ -1.76
HIF3A-219ENST00000600879 A0A1B0GU33 70 aa4.07□□□□□ -1.76
HIF3A-219ENST00000600879 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
HIF3A-219ENST00000600879 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
HIF3A-219ENST00000600879 V9GYY9 64 aa4.06□□□□□ -1.76
HIF3A-219ENST00000600879 Q1T7F1 81 aa4.04□□□□□ -1.76
HIF3A-219ENST00000600879 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
HIF3A-219ENST00000600879 PSPHP1O15172 72 aa4□□□□□ -1.77
HIF3A-219ENST00000600879 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
HIF3A-219ENST00000600879 A0A0D9SG42 100 aa3.98□□□□□ -1.77
HIF3A-219ENST00000600879 UQCR11O14957 56 aa3.96□□□□□ -1.78
HIF3A-219ENST00000600879 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
HIF3A-219ENST00000600879 A8MU10 97 aa3.93□□□□□ -1.78
HIF3A-219ENST00000600879 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
HIF3A-219ENST00000600879 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
HIF3A-219ENST00000600879 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
HIF3A-219ENST00000600879 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
HIF3A-219ENST00000600879 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
HIF3A-219ENST00000600879 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
HIF3A-219ENST00000600879 A6NED7 52 aa3.88□□□□□ -1.79
HIF3A-219ENST00000600879 MT4P47944 62 aa3.88□□□□□ -1.79
HIF3A-219ENST00000600879 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms