RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 COX7CP15954 63 aa9.81□□□□□ -0.84
GTPBP3-221ENST00000600610 C20orf197Q8N268 126 aa9.81□□□□□ -0.84
GTPBP3-221ENST00000600610 NDUFC1O43677 76 aa9.79□□□□□ -0.84
GTPBP3-221ENST00000600610 FSIP2Q5CZC0 6907 aa9.78□□□□□ -0.84
GTPBP3-221ENST00000600610 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
GTPBP3-221ENST00000600610 SNURFQ9Y675 71 aa9.78□□□□□ -0.84
GTPBP3-221ENST00000600610 KRTAP10-10P60014 251 aa9.77□□□□□ -0.85
GTPBP3-221ENST00000600610 MT1FP04733 61 aa9.76□□□□□ -0.85
GTPBP3-221ENST00000600610 SPANXA2-OT1Q8N9U9 137 aa9.75□□□□□ -0.85
GTPBP3-221ENST00000600610 ACYP2P14621 99 aa9.73□□□□□ -0.85
GTPBP3-221ENST00000600610 ANAPC13Q9BS18 74 aa9.68□□□□□ -0.86
GTPBP3-221ENST00000600610 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
GTPBP3-221ENST00000600610 H0YAA0 97 aa9.64□□□□□ -0.87
GTPBP3-221ENST00000600610 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
GTPBP3-221ENST00000600610 LCE2BO14633 110 aa9.56□□□□□ -0.88
GTPBP3-221ENST00000600610 H7BZZ5 65 aa9.52□□□□□ -0.89
GTPBP3-221ENST00000600610 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
GTPBP3-221ENST00000600610 USH2AO75445 5202 aa9.5□□□□□ -0.89
GTPBP3-221ENST00000600610 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
GTPBP3-221ENST00000600610 CYSTM1Q9H1C7 97 aa9.43□□□□□ -0.9
GTPBP3-221ENST00000600610 CCDC179H3BU77 68 aa9.4□□□□□ -0.9
GTPBP3-221ENST00000600610 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
GTPBP3-221ENST00000600610 SPRR2GQ9BYE4 73 aa9.38□□□□□ -0.91
GTPBP3-221ENST00000600610 SSPOA2VEC9 5147 aa9.37□□□□□ -0.91
GTPBP3-221ENST00000600610 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
GTPBP3-221ENST00000600610 COA5Q86WW8 74 aa9.35□□□□□ -0.91
GTPBP3-221ENST00000600610 ATP5EP56381 51 aaPredicted RBP9.32□□□□□ -0.92
GTPBP3-221ENST00000600610 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
GTPBP3-221ENST00000600610 KRTAP19-8Q3LI54 63 aa9.24□□□□□ -0.93
GTPBP3-221ENST00000600610 KRTAP19-6Q3LI70 58 aa9.24□□□□□ -0.93
GTPBP3-221ENST00000600610 P0C880 135 aa9.22□□□□□ -0.93
GTPBP3-221ENST00000600610 TMEM258P61165 79 aa9.2□□□□□ -0.94
GTPBP3-221ENST00000600610 Q5VV11 94 aa9.19□□□□□ -0.94
GTPBP3-221ENST00000600610 R4GN34 69 aa9.19□□□□□ -0.94
GTPBP3-221ENST00000600610 FCGBPQ9Y6R7 5405 aaPredicted RBP9.16□□□□□ -0.94
GTPBP3-221ENST00000600610 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.15□□□□□ -0.94
GTPBP3-221ENST00000600610 SEC61GP60059 68 aa9.11□□□□□ -0.95
GTPBP3-221ENST00000600610 MT1BP07438 61 aa9.1□□□□□ -0.95
GTPBP3-221ENST00000600610 M0QZ58 72 aa9.09□□□□□ -0.95
GTPBP3-221ENST00000600610 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
GTPBP3-221ENST00000600610 KRTAP9-7A8MTY7 169 aa8.98□□□□□ -0.97
GTPBP3-221ENST00000600610 PLAC4Q8WY50 150 aa8.94□□□□□ -0.98
GTPBP3-221ENST00000600610 A0A1B0GU69 56 aa8.9□□□□□ -0.98
GTPBP3-221ENST00000600610 PCP4P48539 62 aa8.88□□□□□ -0.99
GTPBP3-221ENST00000600610 A6NN06 94 aa8.87□□□□□ -0.99
GTPBP3-221ENST00000600610 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
GTPBP3-221ENST00000600610 A0A1B0GU33 70 aa8.85□□□□□ -0.99
GTPBP3-221ENST00000600610 MACF1Q9UPN3 7388 aaKnown RBP8.84□□□□□ -0.99
GTPBP3-221ENST00000600610 KRTAP10-5P60370 271 aa8.84□□□□□ -0.99
GTPBP3-221ENST00000600610 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
GTPBP3-221ENST00000600610 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
GTPBP3-221ENST00000600610 PRO2289Q9P1D8 64 aa8.79□□□□□ -1
GTPBP3-221ENST00000600610 KRTAP13-4Q3LI77 160 aa8.78□□□□□ -1
GTPBP3-221ENST00000600610 V9GYY9 64 aa8.69□□□□□ -1.02
GTPBP3-221ENST00000600610 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
GTPBP3-221ENST00000600610 KRTAP6-3Q3LI67 103 aa8.66□□□□□ -1.02
GTPBP3-221ENST00000600610 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
GTPBP3-221ENST00000600610 SMIM26A0A096LP01 95 aa8.65□□□□□ -1.02
GTPBP3-221ENST00000600610 MT1XP80297 61 aa8.65□□□□□ -1.02
GTPBP3-221ENST00000600610 RPS28P62857 69 aaKnown RBP8.63□□□□□ -1.03
GTPBP3-221ENST00000600610 Q1T7F1 81 aa8.59□□□□□ -1.03
GTPBP3-221ENST00000600610 A0A0D9SG42 100 aa8.56□□□□□ -1.04
GTPBP3-221ENST00000600610 UQCR11O14957 56 aa8.54□□□□□ -1.04
GTPBP3-221ENST00000600610 CAMK2N1Q7Z7J9 78 aa8.51□□□□□ -1.05
GTPBP3-221ENST00000600610 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
GTPBP3-221ENST00000600610 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
GTPBP3-221ENST00000600610 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
GTPBP3-221ENST00000600610 A8MU10 97 aa8.41□□□□□ -1.06
GTPBP3-221ENST00000600610 PSPHP1O15172 72 aa8.38□□□□□ -1.07
GTPBP3-221ENST00000600610 KRTAP5-9P26371 169 aa8.34□□□□□ -1.07
GTPBP3-221ENST00000600610 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
GTPBP3-221ENST00000600610 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
GTPBP3-221ENST00000600610 KRTAP10-7P60409 375 aaPredicted RBP8.22□□□□□ -1.09
GTPBP3-221ENST00000600610 A6NED7 52 aa8.18□□□□□ -1.1
GTPBP3-221ENST00000600610 K7ERS5 55 aa8.18□□□□□ -1.1
GTPBP3-221ENST00000600610 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
GTPBP3-221ENST00000600610 KRTAP8-1Q8IUC2 63 aa8.15□□□□□ -1.1
GTPBP3-221ENST00000600610 KMT2DO14686 5537 aa8.15□□□□□ -1.11
GTPBP3-221ENST00000600610 NEBP20929 6669 aa8.13□□□□□ -1.11
GTPBP3-221ENST00000600610 SPRR2FQ96RM1 72 aa8.1□□□□□ -1.11
GTPBP3-221ENST00000600610 KRTAP4-8A0A0G2JLE6 195 aa8.06□□□□□ -1.12
GTPBP3-221ENST00000600610 KRTAP4-8Q9BYQ9 185 aa8.06□□□□□ -1.12
GTPBP3-221ENST00000600610 C10orf95Q9H7T3 257 aa8.04□□□□□ -1.12
GTPBP3-221ENST00000600610 TNP1P09430 55 aa8.02□□□□□ -1.13
GTPBP3-221ENST00000600610 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
GTPBP3-221ENST00000600610 MDN1Q9NU22 5596 aa7.96□□□□□ -1.13
GTPBP3-221ENST00000600610 SPRR2EP22531 72 aa7.93□□□□□ -1.14
GTPBP3-221ENST00000600610 SPRR2BP35325 72 aa7.93□□□□□ -1.14
GTPBP3-221ENST00000600610 SPRR2AP35326 72 aa7.93□□□□□ -1.14
GTPBP3-221ENST00000600610 KRTAP20-1Q3LI63 56 aa7.9□□□□□ -1.14
GTPBP3-221ENST00000600610 LCE1AQ5T7P2 110 aa7.87□□□□□ -1.15
GTPBP3-221ENST00000600610 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
GTPBP3-221ENST00000600610 KRTAP2-3P0C7H8 128 aa7.78□□□□□ -1.16
GTPBP3-221ENST00000600610 KRTAP2-4Q9BYR9 128 aa7.78□□□□□ -1.16
GTPBP3-221ENST00000600610 KRTAP19-7Q3SYF9 63 aa7.73□□□□□ -1.17
GTPBP3-221ENST00000600610 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
GTPBP3-221ENST00000600610 SPRR2DP22532 72 aa7.67□□□□□ -1.18
GTPBP3-221ENST00000600610 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
GTPBP3-221ENST00000600610 ROMO1P60602 79 aa7.65□□□□□ -1.18
GTPBP3-221ENST00000600610 MT1EP04732 61 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms