RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 NDUFC1O43677 76 aa7.33□□□□□ -1.24
IRF3-226ENST00000600453 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
IRF3-226ENST00000600453 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
IRF3-226ENST00000600453 CCDC179H3BU77 68 aa7.3□□□□□ -1.24
IRF3-226ENST00000600453 KRTAP19-6Q3LI70 58 aa7.3□□□□□ -1.24
IRF3-226ENST00000600453 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
IRF3-226ENST00000600453 C20orf197Q8N268 126 aa7.29□□□□□ -1.24
IRF3-226ENST00000600453 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
IRF3-226ENST00000600453 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
IRF3-226ENST00000600453 S4R3F8 94 aa7.27□□□□□ -1.25
IRF3-226ENST00000600453 H0Y9P7 68 aa7.26□□□□□ -1.25
IRF3-226ENST00000600453 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
IRF3-226ENST00000600453 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
IRF3-226ENST00000600453 LINC00208Q96KT6 92 aa7.21□□□□□ -1.26
IRF3-226ENST00000600453 CYP4F30PQ9H0H9 118 aa7.21□□□□□ -1.26
IRF3-226ENST00000600453 LCA10Q71F78 164 aa7.19□□□□□ -1.26
IRF3-226ENST00000600453 TMEM258P61165 79 aa7.18□□□□□ -1.26
IRF3-226ENST00000600453 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
IRF3-226ENST00000600453 ATP5EP56381 51 aaPredicted RBP7.16□□□□□ -1.26
IRF3-226ENST00000600453 H7BZZ5 65 aa7.15□□□□□ -1.26
IRF3-226ENST00000600453 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
IRF3-226ENST00000600453 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
IRF3-226ENST00000600453 CYSTM1Q9H1C7 97 aa7.08□□□□□ -1.28
IRF3-226ENST00000600453 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
IRF3-226ENST00000600453 Q5VV11 94 aa7.06□□□□□ -1.28
IRF3-226ENST00000600453 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
IRF3-226ENST00000600453 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
IRF3-226ENST00000600453 KRTAP19-8Q3LI54 63 aa7.02□□□□□ -1.29
IRF3-226ENST00000600453 A8MUN3 132 aa7□□□□□ -1.29
IRF3-226ENST00000600453 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
IRF3-226ENST00000600453 A6NN06 94 aa6.99□□□□□ -1.29
IRF3-226ENST00000600453 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
IRF3-226ENST00000600453 MT1BP07438 61 aa6.98□□□□□ -1.29
IRF3-226ENST00000600453 KRTAP6-3Q3LI67 103 aa6.98□□□□□ -1.29
IRF3-226ENST00000600453 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
IRF3-226ENST00000600453 H0YAA0 97 aa6.94□□□□□ -1.3
IRF3-226ENST00000600453 ACYP2P14621 99 aa6.92□□□□□ -1.3
IRF3-226ENST00000600453 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
IRF3-226ENST00000600453 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
IRF3-226ENST00000600453 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
IRF3-226ENST00000600453 COA5Q86WW8 74 aa6.8□□□□□ -1.32
IRF3-226ENST00000600453 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
IRF3-226ENST00000600453 CHKB-CPT1BH3BT56 60 aa6.76□□□□□ -1.33
IRF3-226ENST00000600453 SPTSSBQ8NFR3 76 aa6.75□□□□□ -1.33
IRF3-226ENST00000600453 V9GYY9 64 aa6.73□□□□□ -1.33
IRF3-226ENST00000600453 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
IRF3-226ENST00000600453 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
IRF3-226ENST00000600453 R4GN34 69 aa6.7□□□□□ -1.34
IRF3-226ENST00000600453 Q1T7F1 81 aa6.65□□□□□ -1.34
IRF3-226ENST00000600453 P0C880 135 aa6.62□□□□□ -1.35
IRF3-226ENST00000600453 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
IRF3-226ENST00000600453 M0QZ58 72 aa6.61□□□□□ -1.35
IRF3-226ENST00000600453 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
IRF3-226ENST00000600453 NEBP20929 6669 aa6.57□□□□□ -1.36
IRF3-226ENST00000600453 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
IRF3-226ENST00000600453 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
IRF3-226ENST00000600453 MT1XP80297 61 aa6.54□□□□□ -1.36
IRF3-226ENST00000600453 SEC61GP60059 68 aa6.53□□□□□ -1.36
IRF3-226ENST00000600453 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
IRF3-226ENST00000600453 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
IRF3-226ENST00000600453 A0A1B0GU69 56 aa6.48□□□□□ -1.37
IRF3-226ENST00000600453 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
IRF3-226ENST00000600453 KRTAP20-1Q3LI63 56 aa6.46□□□□□ -1.38
IRF3-226ENST00000600453 KMT2DO14686 5537 aa6.42□□□□□ -1.38
IRF3-226ENST00000600453 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
IRF3-226ENST00000600453 KRTAP8-1Q8IUC2 63 aa6.41□□□□□ -1.38
IRF3-226ENST00000600453 PSPHP1O15172 72 aa6.4□□□□□ -1.38
IRF3-226ENST00000600453 UQCR11O14957 56 aa6.33□□□□□ -1.4
IRF3-226ENST00000600453 SPRR2EP22531 72 aa6.33□□□□□ -1.4
IRF3-226ENST00000600453 SPRR2BP35325 72 aa6.33□□□□□ -1.4
IRF3-226ENST00000600453 SPRR2AP35326 72 aa6.33□□□□□ -1.4
IRF3-226ENST00000600453 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
IRF3-226ENST00000600453 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
IRF3-226ENST00000600453 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
IRF3-226ENST00000600453 A0A1B0GU33 70 aa6.29□□□□□ -1.4
IRF3-226ENST00000600453 A6NED7 52 aa6.28□□□□□ -1.4
IRF3-226ENST00000600453 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
IRF3-226ENST00000600453 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
IRF3-226ENST00000600453 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
IRF3-226ENST00000600453 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
IRF3-226ENST00000600453 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
IRF3-226ENST00000600453 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
IRF3-226ENST00000600453 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
IRF3-226ENST00000600453 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
IRF3-226ENST00000600453 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
IRF3-226ENST00000600453 BRK1Q8WUW1 75 aa6.16□□□□□ -1.42
IRF3-226ENST00000600453 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
IRF3-226ENST00000600453 SPRR2DP22532 72 aa6.13□□□□□ -1.43
IRF3-226ENST00000600453 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
IRF3-226ENST00000600453 KRTAP2-1Q9BYU5 128 aa6.12□□□□□ -1.43
IRF3-226ENST00000600453 PRO0628Q9UI54 55 aa6.11□□□□□ -1.43
IRF3-226ENST00000600453 K7ERS5 55 aa6.05□□□□□ -1.44
IRF3-226ENST00000600453 A0A0D9SG42 100 aa6.01□□□□□ -1.45
IRF3-226ENST00000600453 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
IRF3-226ENST00000600453 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
IRF3-226ENST00000600453 A8MU10 97 aa5.94□□□□□ -1.46
IRF3-226ENST00000600453 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
IRF3-226ENST00000600453 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
IRF3-226ENST00000600453 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
IRF3-226ENST00000600453 MT1EP04732 61 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms