RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 H7BZZ5 65 aa5.92□□□□□ -1.46
TGFB1-204ENST00000600196 LCA10Q71F78 164 aa5.91□□□□□ -1.46
TGFB1-204ENST00000600196 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
TGFB1-204ENST00000600196 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
TGFB1-204ENST00000600196 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
TGFB1-204ENST00000600196 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
TGFB1-204ENST00000600196 H0YAA0 97 aa5.84□□□□□ -1.47
TGFB1-204ENST00000600196 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
TGFB1-204ENST00000600196 CYSTM1Q9H1C7 97 aa5.81□□□□□ -1.48
TGFB1-204ENST00000600196 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
TGFB1-204ENST00000600196 MT2AP02795 61 aa5.78□□□□□ -1.48
TGFB1-204ENST00000600196 TMEM258P61165 79 aa5.78□□□□□ -1.48
TGFB1-204ENST00000600196 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
TGFB1-204ENST00000600196 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
TGFB1-204ENST00000600196 COA5Q86WW8 74 aa5.74□□□□□ -1.49
TGFB1-204ENST00000600196 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
TGFB1-204ENST00000600196 MT1FP04733 61 aa5.71□□□□□ -1.5
TGFB1-204ENST00000600196 PCP4P48539 62 aa5.69□□□□□ -1.5
TGFB1-204ENST00000600196 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
TGFB1-204ENST00000600196 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
TGFB1-204ENST00000600196 SEC61GP60059 68 aa5.6□□□□□ -1.51
TGFB1-204ENST00000600196 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
TGFB1-204ENST00000600196 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
TGFB1-204ENST00000600196 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
TGFB1-204ENST00000600196 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
TGFB1-204ENST00000600196 M0QZ58 72 aa5.53□□□□□ -1.52
TGFB1-204ENST00000600196 P0C880 135 aa5.53□□□□□ -1.52
TGFB1-204ENST00000600196 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
TGFB1-204ENST00000600196 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
TGFB1-204ENST00000600196 R4GN34 69 aa5.52□□□□□ -1.53
TGFB1-204ENST00000600196 LCE2BO14633 110 aa5.5□□□□□ -1.53
TGFB1-204ENST00000600196 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
TGFB1-204ENST00000600196 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
TGFB1-204ENST00000600196 A0A1B0GU69 56 aa5.48□□□□□ -1.53
TGFB1-204ENST00000600196 Q5VV11 94 aa5.48□□□□□ -1.53
TGFB1-204ENST00000600196 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
TGFB1-204ENST00000600196 V9GYY9 64 aa5.48□□□□□ -1.53
TGFB1-204ENST00000600196 USH2AO75445 5202 aa5.43□□□□□ -1.54
TGFB1-204ENST00000600196 SMIM26A0A096LP01 95 aa5.42□□□□□ -1.54
TGFB1-204ENST00000600196 A0A1B0GU33 70 aa5.42□□□□□ -1.54
TGFB1-204ENST00000600196 A6NN06 94 aa5.4□□□□□ -1.54
TGFB1-204ENST00000600196 Q1T7F1 81 aa5.4□□□□□ -1.54
TGFB1-204ENST00000600196 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
TGFB1-204ENST00000600196 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
TGFB1-204ENST00000600196 MT1BP07438 61 aa5.37□□□□□ -1.55
TGFB1-204ENST00000600196 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
TGFB1-204ENST00000600196 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
TGFB1-204ENST00000600196 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
TGFB1-204ENST00000600196 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
TGFB1-204ENST00000600196 UQCR11O14957 56 aa5.29□□□□□ -1.56
TGFB1-204ENST00000600196 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
TGFB1-204ENST00000600196 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
TGFB1-204ENST00000600196 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
TGFB1-204ENST00000600196 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
TGFB1-204ENST00000600196 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
TGFB1-204ENST00000600196 PSPHP1O15172 72 aa5.19□□□□□ -1.58
TGFB1-204ENST00000600196 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
TGFB1-204ENST00000600196 A0A0D9SG42 100 aa5.15□□□□□ -1.59
TGFB1-204ENST00000600196 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
TGFB1-204ENST00000600196 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
TGFB1-204ENST00000600196 MT1XP80297 61 aa5.12□□□□□ -1.59
TGFB1-204ENST00000600196 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
TGFB1-204ENST00000600196 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
TGFB1-204ENST00000600196 A8MU10 97 aa5.1□□□□□ -1.59
TGFB1-204ENST00000600196 A6NED7 52 aa5.09□□□□□ -1.59
TGFB1-204ENST00000600196 K7ERS5 55 aa5.07□□□□□ -1.6
TGFB1-204ENST00000600196 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
TGFB1-204ENST00000600196 CDC42SE1Q9NRR8 79 aa5.01□□□□□ -1.61
TGFB1-204ENST00000600196 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
TGFB1-204ENST00000600196 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
TGFB1-204ENST00000600196 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
TGFB1-204ENST00000600196 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
TGFB1-204ENST00000600196 TNP1P09430 55 aa4.86□□□□□ -1.63
TGFB1-204ENST00000600196 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
TGFB1-204ENST00000600196 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
TGFB1-204ENST00000600196 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
TGFB1-204ENST00000600196 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
TGFB1-204ENST00000600196 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
TGFB1-204ENST00000600196 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
TGFB1-204ENST00000600196 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
TGFB1-204ENST00000600196 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
TGFB1-204ENST00000600196 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
TGFB1-204ENST00000600196 ROMO1P60602 79 aa4.74□□□□□ -1.65
TGFB1-204ENST00000600196 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
TGFB1-204ENST00000600196 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
TGFB1-204ENST00000600196 KMT2DO14686 5537 aa4.66□□□□□ -1.66
TGFB1-204ENST00000600196 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
TGFB1-204ENST00000600196 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
TGFB1-204ENST00000600196 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
TGFB1-204ENST00000600196 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
TGFB1-204ENST00000600196 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
TGFB1-204ENST00000600196 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
TGFB1-204ENST00000600196 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
TGFB1-204ENST00000600196 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
TGFB1-204ENST00000600196 NEBP20929 6669 aa4.53□□□□□ -1.68
TGFB1-204ENST00000600196 MT1EP04732 61 aa4.52□□□□□ -1.69
TGFB1-204ENST00000600196 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
TGFB1-204ENST00000600196 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
TGFB1-204ENST00000600196 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
TGFB1-204ENST00000600196 SPRR2EP22531 72 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms