RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SERP2Q8N6R1 65 aa9.15□□□□□ -0.94
CCDC9-205ENST00000600117 KRTAP9-8Q9BYQ0 159 aa9.13□□□□□ -0.95
CCDC9-205ENST00000600117 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
CCDC9-205ENST00000600117 SNURFQ9Y675 71 aa9.04□□□□□ -0.96
CCDC9-205ENST00000600117 S4R3F8 94 aa9.04□□□□□ -0.96
CCDC9-205ENST00000600117 C20orf197Q8N268 126 aa9.03□□□□□ -0.96
CCDC9-205ENST00000600117 A8MUN3 132 aa9.02□□□□□ -0.97
CCDC9-205ENST00000600117 COX7CP15954 63 aa9.01□□□□□ -0.97
CCDC9-205ENST00000600117 LCA10Q71F78 164 aa9□□□□□ -0.97
CCDC9-205ENST00000600117 LCE2BO14633 110 aa8.97□□□□□ -0.97
CCDC9-205ENST00000600117 MT2AP02795 61 aa8.97□□□□□ -0.97
CCDC9-205ENST00000600117 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
CCDC9-205ENST00000600117 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
CCDC9-205ENST00000600117 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
CCDC9-205ENST00000600117 MT1FP04733 61 aa8.9□□□□□ -0.98
CCDC9-205ENST00000600117 CSAG1Q6PB30 78 aa8.9□□□□□ -0.98
CCDC9-205ENST00000600117 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
CCDC9-205ENST00000600117 KRTAP9-3Q9BYQ3 159 aa8.86□□□□□ -0.99
CCDC9-205ENST00000600117 CYSTM1Q9H1C7 97 aa8.84□□□□□ -0.99
CCDC9-205ENST00000600117 NDUFC1O43677 76 aa8.83□□□□□ -1
CCDC9-205ENST00000600117 KRTAP10-10P60014 251 aa8.82□□□□□ -1
CCDC9-205ENST00000600117 ACYP2P14621 99 aa8.79□□□□□ -1
CCDC9-205ENST00000600117 KRTAP6-3Q3LI67 103 aa8.79□□□□□ -1
CCDC9-205ENST00000600117 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
CCDC9-205ENST00000600117 CCDC179H3BU77 68 aa8.77□□□□□ -1.01
CCDC9-205ENST00000600117 H7BZZ5 65 aa8.77□□□□□ -1.01
CCDC9-205ENST00000600117 NEBP20929 6669 aa8.77□□□□□ -1.01
CCDC9-205ENST00000600117 H0YAA0 97 aa8.67□□□□□ -1.02
CCDC9-205ENST00000600117 CHKB-CPT1BH3BT56 60 aa8.62□□□□□ -1.03
CCDC9-205ENST00000600117 MUC12Q9UKN1 5478 aa8.6□□□□□ -1.03
CCDC9-205ENST00000600117 COA5Q86WW8 74 aa8.59□□□□□ -1.03
CCDC9-205ENST00000600117 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
CCDC9-205ENST00000600117 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
CCDC9-205ENST00000600117 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
CCDC9-205ENST00000600117 PCP4P48539 62 aa8.48□□□□□ -1.05
CCDC9-205ENST00000600117 SPRR2GQ9BYE4 73 aa8.48□□□□□ -1.05
CCDC9-205ENST00000600117 CRIPTQ9P021 101 aa8.48□□□□□ -1.05
CCDC9-205ENST00000600117 P0C880 135 aa8.47□□□□□ -1.05
CCDC9-205ENST00000600117 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
CCDC9-205ENST00000600117 KRTAP20-1Q3LI63 56 aa8.44□□□□□ -1.06
CCDC9-205ENST00000600117 TMEM258P61165 79 aa8.43□□□□□ -1.06
CCDC9-205ENST00000600117 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
CCDC9-205ENST00000600117 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
CCDC9-205ENST00000600117 MT1BP07438 61 aa8.31□□□□□ -1.08
CCDC9-205ENST00000600117 R4GN34 69 aa8.29□□□□□ -1.08
CCDC9-205ENST00000600117 Q5VV11 94 aa8.27□□□□□ -1.09
CCDC9-205ENST00000600117 M0QZ58 72 aa8.26□□□□□ -1.09
CCDC9-205ENST00000600117 KMT2DO14686 5537 aa8.23□□□□□ -1.09
CCDC9-205ENST00000600117 SEC61GP60059 68 aa8.18□□□□□ -1.1
CCDC9-205ENST00000600117 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
CCDC9-205ENST00000600117 A6NN06 94 aa8.13□□□□□ -1.11
CCDC9-205ENST00000600117 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
CCDC9-205ENST00000600117 KRTAP5-9P26371 169 aa8.12□□□□□ -1.11
CCDC9-205ENST00000600117 A0A1B0GU69 56 aa8.1□□□□□ -1.11
CCDC9-205ENST00000600117 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
CCDC9-205ENST00000600117 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
CCDC9-205ENST00000600117 KRTAP2-3P0C7H8 128 aa8.06□□□□□ -1.12
CCDC9-205ENST00000600117 KRTAP2-4Q9BYR9 128 aa8.06□□□□□ -1.12
CCDC9-205ENST00000600117 A0A1B0GU33 70 aa8.05□□□□□ -1.12
CCDC9-205ENST00000600117 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
CCDC9-205ENST00000600117 KRTAP10-5P60370 271 aa8□□□□□ -1.13
CCDC9-205ENST00000600117 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
CCDC9-205ENST00000600117 PRR15LQ9BU68 103 aa7.97□□□□□ -1.13
CCDC9-205ENST00000600117 MT1XP80297 61 aa7.9□□□□□ -1.14
CCDC9-205ENST00000600117 RPS28P62857 69 aaKnown RBP7.89□□□□□ -1.15
CCDC9-205ENST00000600117 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
CCDC9-205ENST00000600117 A0A0D9SG42 100 aa7.87□□□□□ -1.15
CCDC9-205ENST00000600117 Q1T7F1 81 aa7.86□□□□□ -1.15
CCDC9-205ENST00000600117 V9GYY9 64 aa7.85□□□□□ -1.15
CCDC9-205ENST00000600117 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
CCDC9-205ENST00000600117 A8MU10 97 aa7.78□□□□□ -1.16
CCDC9-205ENST00000600117 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
CCDC9-205ENST00000600117 PSPHP1O15172 72 aa7.76□□□□□ -1.17
CCDC9-205ENST00000600117 KRTAP2-2Q9BYT5 123 aa7.76□□□□□ -1.17
CCDC9-205ENST00000600117 KRTAP2-1Q9BYU5 128 aa7.76□□□□□ -1.17
CCDC9-205ENST00000600117 UQCR11O14957 56 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 SPRR2EP22531 72 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 SPRR2BP35325 72 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 SPRR2AP35326 72 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
CCDC9-205ENST00000600117 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
CCDC9-205ENST00000600117 SPRR2FQ96RM1 72 aa7.7□□□□□ -1.18
CCDC9-205ENST00000600117 CAMK2N1Q7Z7J9 78 aa7.68□□□□□ -1.18
CCDC9-205ENST00000600117 GPR98Q8WXG9 6306 aa7.67□□□□□ -1.18
CCDC9-205ENST00000600117 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
CCDC9-205ENST00000600117 LCE1AQ5T7P2 110 aa7.56□□□□□ -1.2
CCDC9-205ENST00000600117 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
CCDC9-205ENST00000600117 A6NED7 52 aa7.51□□□□□ -1.21
CCDC9-205ENST00000600117 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
CCDC9-205ENST00000600117 SPRR2DP22532 72 aa7.49□□□□□ -1.21
CCDC9-205ENST00000600117 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
CCDC9-205ENST00000600117 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
CCDC9-205ENST00000600117 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.22
CCDC9-205ENST00000600117 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
CCDC9-205ENST00000600117 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
CCDC9-205ENST00000600117 K7ERS5 55 aa7.33□□□□□ -1.24
CCDC9-205ENST00000600117 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
CCDC9-205ENST00000600117 DSTQ03001 7570 aaKnown RBP7.29□□□□□ -1.24
CCDC9-205ENST00000600117 TNP1P09430 55 aa7.22□□□□□ -1.25
CCDC9-205ENST00000600117 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms