RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 KRTAP9-2Q9BYQ4 174 aa10.21□□□□□ -0.78
IRF3-221ENST00000598808 ACYP2P14621 99 aa10.2□□□□□ -0.78
IRF3-221ENST00000598808 COA5Q86WW8 74 aa10.17□□□□□ -0.78
IRF3-221ENST00000598808 A8MUN3 132 aa10.17□□□□□ -0.78
IRF3-221ENST00000598808 MPLKIPQ8TAP9 179 aa10.12□□□□□ -0.79
IRF3-221ENST00000598808 FLGP20930 4061 aaPredicted RBP10.12□□□□□ -0.79
IRF3-221ENST00000598808 V9GYY9 64 aa10.07□□□□□ -0.8
IRF3-221ENST00000598808 Q1T7F1 81 aa10.03□□□□□ -0.8
IRF3-221ENST00000598808 CHKB-CPT1BH3BT56 60 aa10.02□□□□□ -0.81
IRF3-221ENST00000598808 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
IRF3-221ENST00000598808 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.82
IRF3-221ENST00000598808 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
IRF3-221ENST00000598808 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.83
IRF3-221ENST00000598808 H1FX-AS1Q4G0G2 97 aa9.88□□□□□ -0.83
IRF3-221ENST00000598808 KRTAP3-1Q9BYR8 98 aa9.87□□□□□ -0.83
IRF3-221ENST00000598808 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
IRF3-221ENST00000598808 KRTAP9-6A0A140TA67 174 aa9.83□□□□□ -0.84
IRF3-221ENST00000598808 PRR15LQ9BU68 103 aa9.73□□□□□ -0.85
IRF3-221ENST00000598808 PSPHP1O15172 72 aa9.72□□□□□ -0.85
IRF3-221ENST00000598808 FSIP2Q5CZC0 6907 aa9.71□□□□□ -0.86
IRF3-221ENST00000598808 S4R3F8 94 aa9.69□□□□□ -0.86
IRF3-221ENST00000598808 Q5VV11 94 aa9.68□□□□□ -0.86
IRF3-221ENST00000598808 KRTAP9-8Q9BYQ0 159 aa9.68□□□□□ -0.86
IRF3-221ENST00000598808 A0A1B0GU69 56 aa9.65□□□□□ -0.87
IRF3-221ENST00000598808 MT2AP02795 61 aa9.64□□□□□ -0.87
IRF3-221ENST00000598808 CRCT1Q9UGL9 99 aa9.64□□□□□ -0.87
IRF3-221ENST00000598808 SEC61GP60059 68 aa9.62□□□□□ -0.87
IRF3-221ENST00000598808 KRTAP10-10P60014 251 aa9.59□□□□□ -0.87
IRF3-221ENST00000598808 LCA10Q71F78 164 aa9.59□□□□□ -0.87
IRF3-221ENST00000598808 MT1FP04733 61 aa9.57□□□□□ -0.88
IRF3-221ENST00000598808 CSAG1Q6PB30 78 aa9.53□□□□□ -0.88
IRF3-221ENST00000598808 A6NED7 52 aa9.49□□□□□ -0.89
IRF3-221ENST00000598808 BRK1Q8WUW1 75 aa9.47□□□□□ -0.89
IRF3-221ENST00000598808 UQCR11O14957 56 aa9.42□□□□□ -0.9
IRF3-221ENST00000598808 PRO0628Q9UI54 55 aa9.41□□□□□ -0.9
IRF3-221ENST00000598808 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.91
IRF3-221ENST00000598808 KRTAP9-3Q9BYQ3 159 aa9.36□□□□□ -0.91
IRF3-221ENST00000598808 USH2AO75445 5202 aa9.35□□□□□ -0.91
IRF3-221ENST00000598808 A0A1B0GU33 70 aa9.31□□□□□ -0.92
IRF3-221ENST00000598808 H0YAA0 97 aa9.31□□□□□ -0.92
IRF3-221ENST00000598808 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
IRF3-221ENST00000598808 MIR22HGQ0VDD5 57 aa9.28□□□□□ -0.92
IRF3-221ENST00000598808 SSPOA2VEC9 5147 aa9.27□□□□□ -0.93
IRF3-221ENST00000598808 LCE2BO14633 110 aa9.27□□□□□ -0.93
IRF3-221ENST00000598808 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
IRF3-221ENST00000598808 A8MU10 97 aa9.14□□□□□ -0.95
IRF3-221ENST00000598808 P0C880 135 aa9.11□□□□□ -0.95
IRF3-221ENST00000598808 M0QZ58 72 aa9.07□□□□□ -0.96
IRF3-221ENST00000598808 KRTAP19-1Q8IUB9 90 aa9.07□□□□□ -0.96
IRF3-221ENST00000598808 CRIPTQ9P021 101 aa9.05□□□□□ -0.96
IRF3-221ENST00000598808 FCGBPQ9Y6R7 5405 aaPredicted RBP9.04□□□□□ -0.96
IRF3-221ENST00000598808 SPRR2GQ9BYE4 73 aa9.01□□□□□ -0.97
IRF3-221ENST00000598808 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
IRF3-221ENST00000598808 PMAIP1Q13794 54 aa8.99□□□□□ -0.97
IRF3-221ENST00000598808 SVIPQ8NHG7 77 aa8.96□□□□□ -0.98
IRF3-221ENST00000598808 K7ERS5 55 aa8.95□□□□□ -0.98
IRF3-221ENST00000598808 KRTAP13-4Q3LI77 160 aa8.95□□□□□ -0.98
IRF3-221ENST00000598808 A6NN06 94 aa8.91□□□□□ -0.98
IRF3-221ENST00000598808 KRTAP19-6Q3LI70 58 aa8.9□□□□□ -0.98
IRF3-221ENST00000598808 R4GN34 69 aa8.9□□□□□ -0.98
IRF3-221ENST00000598808 KRTAP19-8Q3LI54 63 aa8.88□□□□□ -0.99
IRF3-221ENST00000598808 MT1BP07438 61 aa8.85□□□□□ -0.99
IRF3-221ENST00000598808 KRTAP9-7A8MTY7 169 aa8.84□□□□□ -0.99
IRF3-221ENST00000598808 H3BS24 57 aa8.84□□□□□ -0.99
IRF3-221ENST00000598808 A0A0D9SG42 100 aa8.81□□□□□ -1
IRF3-221ENST00000598808 MACF1Q9UPN3 7388 aaKnown RBP8.78□□□□□ -1
IRF3-221ENST00000598808 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
IRF3-221ENST00000598808 KTN1-AS1Q86SY8 53 aa8.7□□□□□ -1.02
IRF3-221ENST00000598808 KRTAP12-1P59990 96 aa8.69□□□□□ -1.02
IRF3-221ENST00000598808 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
IRF3-221ENST00000598808 SYNE2Q8WXH0 6885 aaKnown RBP8.65□□□□□ -1.03
IRF3-221ENST00000598808 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
IRF3-221ENST00000598808 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
IRF3-221ENST00000598808 KRTAP10-5P60370 271 aa8.57□□□□□ -1.04
IRF3-221ENST00000598808 ROMO1P60602 79 aa8.52□□□□□ -1.05
IRF3-221ENST00000598808 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
IRF3-221ENST00000598808 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
IRF3-221ENST00000598808 MT1XP80297 61 aa8.4□□□□□ -1.06
IRF3-221ENST00000598808 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
IRF3-221ENST00000598808 PRAC1Q96KF2 57 aa8.28□□□□□ -1.08
IRF3-221ENST00000598808 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
IRF3-221ENST00000598808 C10orf95Q9H7T3 257 aa8.19□□□□□ -1.1
IRF3-221ENST00000598808 NEBP20929 6669 aa8.15□□□□□ -1.1
IRF3-221ENST00000598808 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
IRF3-221ENST00000598808 KRTAP5-9P26371 169 aa8.07□□□□□ -1.12
IRF3-221ENST00000598808 KRTAP10-7P60409 375 aaPredicted RBP8.06□□□□□ -1.12
IRF3-221ENST00000598808 KMT2DO14686 5537 aa8.02□□□□□ -1.13
IRF3-221ENST00000598808 TNP1P09430 55 aa8□□□□□ -1.13
IRF3-221ENST00000598808 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
IRF3-221ENST00000598808 KRTAP10-12P60413 245 aa7.96□□□□□ -1.13
IRF3-221ENST00000598808 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
IRF3-221ENST00000598808 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
IRF3-221ENST00000598808 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
IRF3-221ENST00000598808 KRTAP23-1A1A580 65 aa7.93□□□□□ -1.14
IRF3-221ENST00000598808 MDN1Q9NU22 5596 aa7.92□□□□□ -1.14
IRF3-221ENST00000598808 SPRR2FQ96RM1 72 aa7.9□□□□□ -1.14
IRF3-221ENST00000598808 KRTAP20-1Q3LI63 56 aa7.75□□□□□ -1.17
IRF3-221ENST00000598808 SPRR2EP22531 72 aa7.7□□□□□ -1.18
IRF3-221ENST00000598808 SPRR2BP35325 72 aa7.7□□□□□ -1.18
IRF3-221ENST00000598808 SPRR2AP35326 72 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms