RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 LCA10Q71F78 164 aa9.37□□□□□ -0.91
LTBP4-223ENST00000598717 PCP4P48539 62 aa9.35□□□□□ -0.91
LTBP4-223ENST00000598717 CSAG1Q6PB30 78 aa9.3□□□□□ -0.92
LTBP4-223ENST00000598717 CHKB-CPT1BH3BT56 60 aa9.28□□□□□ -0.92
LTBP4-223ENST00000598717 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
LTBP4-223ENST00000598717 ATP5EP56381 51 aaPredicted RBP9.26□□□□□ -0.93
LTBP4-223ENST00000598717 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
LTBP4-223ENST00000598717 TMEM258P61165 79 aa9.25□□□□□ -0.93
LTBP4-223ENST00000598717 COA5Q86WW8 74 aa9.2□□□□□ -0.94
LTBP4-223ENST00000598717 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
LTBP4-223ENST00000598717 SPTSSBQ8NFR3 76 aa9.19□□□□□ -0.94
LTBP4-223ENST00000598717 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
LTBP4-223ENST00000598717 MT2AP02795 61 aa9.05□□□□□ -0.96
LTBP4-223ENST00000598717 H0YAA0 97 aa9.01□□□□□ -0.97
LTBP4-223ENST00000598717 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
LTBP4-223ENST00000598717 MT1FP04733 61 aa8.98□□□□□ -0.97
LTBP4-223ENST00000598717 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
LTBP4-223ENST00000598717 SERP1Q9Y6X1 66 aa8.97□□□□□ -0.97
LTBP4-223ENST00000598717 SEC61GP60059 68 aa8.85□□□□□ -0.99
LTBP4-223ENST00000598717 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
LTBP4-223ENST00000598717 P0C880 135 aa8.83□□□□□ -1
LTBP4-223ENST00000598717 CRIPTQ9P021 101 aa8.81□□□□□ -1
LTBP4-223ENST00000598717 KRTAP9-3Q9BYQ3 159 aa8.8□□□□□ -1
LTBP4-223ENST00000598717 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
LTBP4-223ENST00000598717 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
LTBP4-223ENST00000598717 A0A1B0GU69 56 aa8.74□□□□□ -1.01
LTBP4-223ENST00000598717 LINC01558Q9Y6Z2 57 aa8.71□□□□□ -1.02
LTBP4-223ENST00000598717 R4GN34 69 aa8.71□□□□□ -1.02
LTBP4-223ENST00000598717 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
LTBP4-223ENST00000598717 SMIM26A0A096LP01 95 aa8.68□□□□□ -1.02
LTBP4-223ENST00000598717 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
LTBP4-223ENST00000598717 M0QZ58 72 aa8.66□□□□□ -1.02
LTBP4-223ENST00000598717 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
LTBP4-223ENST00000598717 V9GYY9 64 aa8.65□□□□□ -1.02
LTBP4-223ENST00000598717 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
LTBP4-223ENST00000598717 LCE2BO14633 110 aa8.61□□□□□ -1.03
LTBP4-223ENST00000598717 A0A1B0GU33 70 aa8.6□□□□□ -1.03
LTBP4-223ENST00000598717 Q1T7F1 81 aa8.59□□□□□ -1.03
LTBP4-223ENST00000598717 LINC01554Q52M75 96 aa8.52□□□□□ -1.05
LTBP4-223ENST00000598717 KRTAP19-8Q3LI54 63 aa8.5□□□□□ -1.05
LTBP4-223ENST00000598717 Q5VV11 94 aa8.5□□□□□ -1.05
LTBP4-223ENST00000598717 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
LTBP4-223ENST00000598717 PSPHP1O15172 72 aa8.48□□□□□ -1.05
LTBP4-223ENST00000598717 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.06
LTBP4-223ENST00000598717 USH2AO75445 5202 aa8.45□□□□□ -1.06
LTBP4-223ENST00000598717 UQCR11O14957 56 aa8.4□□□□□ -1.06
LTBP4-223ENST00000598717 MT1BP07438 61 aa8.4□□□□□ -1.06
LTBP4-223ENST00000598717 A0A0D9SG42 100 aa8.37□□□□□ -1.07
LTBP4-223ENST00000598717 PLAC4Q8WY50 150 aa8.37□□□□□ -1.07
LTBP4-223ENST00000598717 A6NN06 94 aa8.33□□□□□ -1.08
LTBP4-223ENST00000598717 FSIP2Q5CZC0 6907 aa8.29□□□□□ -1.08
LTBP4-223ENST00000598717 CRCT1Q9UGL9 99 aa8.28□□□□□ -1.08
LTBP4-223ENST00000598717 A8MU10 97 aa8.27□□□□□ -1.09
LTBP4-223ENST00000598717 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
LTBP4-223ENST00000598717 A6NED7 52 aa8.25□□□□□ -1.09
LTBP4-223ENST00000598717 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
LTBP4-223ENST00000598717 SSPOA2VEC9 5147 aa8.22□□□□□ -1.09
LTBP4-223ENST00000598717 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
LTBP4-223ENST00000598717 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
LTBP4-223ENST00000598717 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
LTBP4-223ENST00000598717 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
LTBP4-223ENST00000598717 CAMK2N1Q7Z7J9 78 aa8.12□□□□□ -1.11
LTBP4-223ENST00000598717 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
LTBP4-223ENST00000598717 KRTAP10-5P60370 271 aa8.09□□□□□ -1.11
LTBP4-223ENST00000598717 MT1XP80297 61 aa8.04□□□□□ -1.12
LTBP4-223ENST00000598717 K7ERS5 55 aa8.03□□□□□ -1.12
LTBP4-223ENST00000598717 CDC42SE1Q9NRR8 79 aa8.01□□□□□ -1.13
LTBP4-223ENST00000598717 FCGBPQ9Y6R7 5405 aaPredicted RBP7.95□□□□□ -1.14
LTBP4-223ENST00000598717 BRK1Q8WUW1 75 aa7.84□□□□□ -1.15
LTBP4-223ENST00000598717 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
LTBP4-223ENST00000598717 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
LTBP4-223ENST00000598717 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
LTBP4-223ENST00000598717 TNP1P09430 55 aa7.65□□□□□ -1.18
LTBP4-223ENST00000598717 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
LTBP4-223ENST00000598717 MACF1Q9UPN3 7388 aaKnown RBP7.59□□□□□ -1.19
LTBP4-223ENST00000598717 ROMO1P60602 79 aa7.57□□□□□ -1.2
LTBP4-223ENST00000598717 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.21
LTBP4-223ENST00000598717 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
LTBP4-223ENST00000598717 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
LTBP4-223ENST00000598717 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
LTBP4-223ENST00000598717 KMT2DO14686 5537 aa7.44□□□□□ -1.22
LTBP4-223ENST00000598717 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
LTBP4-223ENST00000598717 SYNE2Q8WXH0 6885 aaKnown RBP7.42□□□□□ -1.22
LTBP4-223ENST00000598717 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
LTBP4-223ENST00000598717 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
LTBP4-223ENST00000598717 KRTAP6-3Q3LI67 103 aa7.38□□□□□ -1.23
LTBP4-223ENST00000598717 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
LTBP4-223ENST00000598717 KRTAP5-9P26371 169 aa7.29□□□□□ -1.24
LTBP4-223ENST00000598717 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
LTBP4-223ENST00000598717 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
LTBP4-223ENST00000598717 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
LTBP4-223ENST00000598717 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
LTBP4-223ENST00000598717 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
LTBP4-223ENST00000598717 MT1EP04732 61 aa7.09□□□□□ -1.27
LTBP4-223ENST00000598717 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
LTBP4-223ENST00000598717 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
LTBP4-223ENST00000598717 SPRR2EP22531 72 aa7.01□□□□□ -1.29
LTBP4-223ENST00000598717 SPRR2BP35325 72 aa7.01□□□□□ -1.29
LTBP4-223ENST00000598717 SPRR2AP35326 72 aa7.01□□□□□ -1.29
LTBP4-223ENST00000598717 LCE1AQ5T7P2 110 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms