RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
VRK3-214ENST00000598553 LINC00208Q96KT6 92 aa5.23□□□□□ -1.57
VRK3-214ENST00000598553 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
VRK3-214ENST00000598553 C8orf17Q9NRJ1 99 aa5.23□□□□□ -1.57
VRK3-214ENST00000598553 USH2AO75445 5202 aa5.22□□□□□ -1.57
VRK3-214ENST00000598553 SPANXA2-OT1Q8N9U9 137 aa5.22□□□□□ -1.57
VRK3-214ENST00000598553 SPINK7P58062 85 aa5.21□□□□□ -1.58
VRK3-214ENST00000598553 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
VRK3-214ENST00000598553 C1orf64Q8NEQ6 169 aa5.2□□□□□ -1.58
VRK3-214ENST00000598553 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
VRK3-214ENST00000598553 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
VRK3-214ENST00000598553 C4orf26Q17RF5 130 aa5.18□□□□□ -1.58
VRK3-214ENST00000598553 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
VRK3-214ENST00000598553 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
VRK3-214ENST00000598553 NDUFS5O43920 106 aa5.15□□□□□ -1.59
VRK3-214ENST00000598553 V9GYY9 64 aa5.15□□□□□ -1.59
VRK3-214ENST00000598553 LOC101927531A0A1B0GV80 90 aa5.12□□□□□ -1.59
VRK3-214ENST00000598553 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
VRK3-214ENST00000598553 Q1T7F1 81 aa5.12□□□□□ -1.59
VRK3-214ENST00000598553 Q5W150 140 aa5.09□□□□□ -1.59
VRK3-214ENST00000598553 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.6
VRK3-214ENST00000598553 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
VRK3-214ENST00000598553 COA5Q86WW8 74 aa5.04□□□□□ -1.6
VRK3-214ENST00000598553 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
VRK3-214ENST00000598553 IGKV2-30P06310 120 aa5.03□□□□□ -1.6
VRK3-214ENST00000598553 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
VRK3-214ENST00000598553 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
VRK3-214ENST00000598553 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
VRK3-214ENST00000598553 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
VRK3-214ENST00000598553 ACYP2P14621 99 aa4.98□□□□□ -1.61
VRK3-214ENST00000598553 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
VRK3-214ENST00000598553 PSPHP1O15172 72 aa4.95□□□□□ -1.62
VRK3-214ENST00000598553 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
VRK3-214ENST00000598553 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
VRK3-214ENST00000598553 A8MUN3 132 aa4.94□□□□□ -1.62
VRK3-214ENST00000598553 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
VRK3-214ENST00000598553 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
VRK3-214ENST00000598553 Q5VV11 94 aa4.93□□□□□ -1.62
VRK3-214ENST00000598553 CHKB-CPT1BH3BT56 60 aa4.91□□□□□ -1.62
VRK3-214ENST00000598553 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
VRK3-214ENST00000598553 MT1BP07438 61 aa4.86□□□□□ -1.63
VRK3-214ENST00000598553 A6NED7 52 aa4.85□□□□□ -1.63
VRK3-214ENST00000598553 S4R3F8 94 aa4.85□□□□□ -1.63
VRK3-214ENST00000598553 LCA10Q71F78 164 aa4.84□□□□□ -1.63
VRK3-214ENST00000598553 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
VRK3-214ENST00000598553 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
VRK3-214ENST00000598553 CDC42SE1Q9NRR8 79 aa4.81□□□□□ -1.64
VRK3-214ENST00000598553 A0A1B0GU69 56 aa4.78□□□□□ -1.64
VRK3-214ENST00000598553 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
VRK3-214ENST00000598553 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
VRK3-214ENST00000598553 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
VRK3-214ENST00000598553 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
VRK3-214ENST00000598553 SEC61GP60059 68 aa4.73□□□□□ -1.65
VRK3-214ENST00000598553 A6NN06 94 aa4.71□□□□□ -1.66
VRK3-214ENST00000598553 UQCR11O14957 56 aa4.7□□□□□ -1.66
VRK3-214ENST00000598553 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
VRK3-214ENST00000598553 SPATA8Q6RVD6 105 aa4.69□□□□□ -1.66
VRK3-214ENST00000598553 A8MU10 97 aa4.68□□□□□ -1.66
VRK3-214ENST00000598553 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
VRK3-214ENST00000598553 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
VRK3-214ENST00000598553 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
VRK3-214ENST00000598553 NEBP20929 6669 aa4.62□□□□□ -1.67
VRK3-214ENST00000598553 H0YAA0 97 aa4.61□□□□□ -1.67
VRK3-214ENST00000598553 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
VRK3-214ENST00000598553 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
VRK3-214ENST00000598553 A0A1B0GU33 70 aa4.55□□□□□ -1.68
VRK3-214ENST00000598553 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
VRK3-214ENST00000598553 MT1XP80297 61 aa4.52□□□□□ -1.69
VRK3-214ENST00000598553 P0C880 135 aa4.5□□□□□ -1.69
VRK3-214ENST00000598553 KMT2DO14686 5537 aa4.48□□□□□ -1.69
VRK3-214ENST00000598553 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
VRK3-214ENST00000598553 K7ERS5 55 aa4.47□□□□□ -1.69
VRK3-214ENST00000598553 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
VRK3-214ENST00000598553 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
VRK3-214ENST00000598553 R4GN34 69 aa4.44□□□□□ -1.7
VRK3-214ENST00000598553 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
VRK3-214ENST00000598553 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
VRK3-214ENST00000598553 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
VRK3-214ENST00000598553 M0QZ58 72 aa4.4□□□□□ -1.71
VRK3-214ENST00000598553 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.71
VRK3-214ENST00000598553 SPRR2EP22531 72 aa4.36□□□□□ -1.71
VRK3-214ENST00000598553 SPRR2BP35325 72 aa4.36□□□□□ -1.71
VRK3-214ENST00000598553 SPRR2AP35326 72 aa4.36□□□□□ -1.71
VRK3-214ENST00000598553 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
VRK3-214ENST00000598553 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
VRK3-214ENST00000598553 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
VRK3-214ENST00000598553 KRTAP8-1Q8IUC2 63 aa4.34□□□□□ -1.71
VRK3-214ENST00000598553 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
VRK3-214ENST00000598553 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
VRK3-214ENST00000598553 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
VRK3-214ENST00000598553 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
VRK3-214ENST00000598553 ROMO1P60602 79 aa4.27□□□□□ -1.73
VRK3-214ENST00000598553 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
VRK3-214ENST00000598553 A0A0D9SG42 100 aa4.25□□□□□ -1.73
VRK3-214ENST00000598553 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
VRK3-214ENST00000598553 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
VRK3-214ENST00000598553 SPRR2DP22532 72 aa4.2□□□□□ -1.74
VRK3-214ENST00000598553 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
VRK3-214ENST00000598553 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
VRK3-214ENST00000598553 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms