RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 RBM12B-AS1Q9P1G2 102 aa4.94□□□□□ -1.62
SIN3B-208ENST00000596638 SRRM2Q9UQ35 2752 aaKnown RBP4.94□□□□□ -1.62
SIN3B-208ENST00000596638 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
SIN3B-208ENST00000596638 FLG2Q5D862 2391 aaPredicted RBP4.93□□□□□ -1.62
SIN3B-208ENST00000596638 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
SIN3B-208ENST00000596638 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
SIN3B-208ENST00000596638 Q6ZSA8 131 aa4.91□□□□□ -1.62
SIN3B-208ENST00000596638 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
SIN3B-208ENST00000596638 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
SIN3B-208ENST00000596638 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
SIN3B-208ENST00000596638 A0A1B0GU69 56 aa4.88□□□□□ -1.63
SIN3B-208ENST00000596638 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
SIN3B-208ENST00000596638 KRTAP13-2Q52LG2 175 aa4.87□□□□□ -1.63
SIN3B-208ENST00000596638 PLA2G1BP04054 148 aaKnown RBP4.86□□□□□ -1.63
SIN3B-208ENST00000596638 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
SIN3B-208ENST00000596638 UQCR11O14957 56 aa4.84□□□□□ -1.63
SIN3B-208ENST00000596638 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
SIN3B-208ENST00000596638 KRTAP1-4P0C5Y4 121 aa4.81□□□□□ -1.64
SIN3B-208ENST00000596638 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
SIN3B-208ENST00000596638 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
SIN3B-208ENST00000596638 SPINK1P00995 79 aa4.79□□□□□ -1.64
SIN3B-208ENST00000596638 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
SIN3B-208ENST00000596638 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
SIN3B-208ENST00000596638 RETNLBQ9BQ08 111 aa4.78□□□□□ -1.64
SIN3B-208ENST00000596638 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
SIN3B-208ENST00000596638 TYMSOSQ8TAI1 123 aa4.73□□□□□ -1.65
SIN3B-208ENST00000596638 TNXBP22105 4242 aa4.73□□□□□ -1.65
SIN3B-208ENST00000596638 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
SIN3B-208ENST00000596638 LINC01554Q52M75 96 aa4.69□□□□□ -1.66
SIN3B-208ENST00000596638 A8MUU9 505 aa4.68□□□□□ -1.66
SIN3B-208ENST00000596638 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
SIN3B-208ENST00000596638 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
SIN3B-208ENST00000596638 C20orf166-AS1Q96NR2 134 aa4.68□□□□□ -1.66
SIN3B-208ENST00000596638 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
SIN3B-208ENST00000596638 LRP2P98164 4655 aa4.66□□□□□ -1.66
SIN3B-208ENST00000596638 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
SIN3B-208ENST00000596638 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
SIN3B-208ENST00000596638 LPAP08519 4548 aa4.62□□□□□ -1.67
SIN3B-208ENST00000596638 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
SIN3B-208ENST00000596638 A0A1B0GU33 70 aa4.61□□□□□ -1.67
SIN3B-208ENST00000596638 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
SIN3B-208ENST00000596638 H0YAA0 97 aa4.6□□□□□ -1.67
SIN3B-208ENST00000596638 CSAG1Q6PB30 78 aa4.6□□□□□ -1.67
SIN3B-208ENST00000596638 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
SIN3B-208ENST00000596638 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
SIN3B-208ENST00000596638 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
SIN3B-208ENST00000596638 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
SIN3B-208ENST00000596638 K7ERS5 55 aa4.53□□□□□ -1.68
SIN3B-208ENST00000596638 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
SIN3B-208ENST00000596638 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
SIN3B-208ENST00000596638 MUC2Q02817 5179 aa4.5□□□□□ -1.69
SIN3B-208ENST00000596638 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
SIN3B-208ENST00000596638 H3BS24 57 aa4.45□□□□□ -1.7
SIN3B-208ENST00000596638 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
SIN3B-208ENST00000596638 FAT4Q6V0I7 4981 aa4.44□□□□□ -1.7
SIN3B-208ENST00000596638 ROMO1P60602 79 aa4.43□□□□□ -1.7
SIN3B-208ENST00000596638 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
SIN3B-208ENST00000596638 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
SIN3B-208ENST00000596638 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
SIN3B-208ENST00000596638 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.7
SIN3B-208ENST00000596638 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
SIN3B-208ENST00000596638 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
SIN3B-208ENST00000596638 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
SIN3B-208ENST00000596638 S4R3F8 94 aa4.35□□□□□ -1.71
SIN3B-208ENST00000596638 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
SIN3B-208ENST00000596638 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
SIN3B-208ENST00000596638 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
SIN3B-208ENST00000596638 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
SIN3B-208ENST00000596638 A0A0D9SG42 100 aa4.25□□□□□ -1.73
SIN3B-208ENST00000596638 P0C880 135 aa4.25□□□□□ -1.73
SIN3B-208ENST00000596638 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
SIN3B-208ENST00000596638 M0QZ58 72 aa4.24□□□□□ -1.73
SIN3B-208ENST00000596638 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
SIN3B-208ENST00000596638 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
SIN3B-208ENST00000596638 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
SIN3B-208ENST00000596638 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
SIN3B-208ENST00000596638 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
SIN3B-208ENST00000596638 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
SIN3B-208ENST00000596638 SEC61BP60468 96 aaKnown RBP4.08□□□□□ -1.76
SIN3B-208ENST00000596638 MT1HP80294 61 aa4.05□□□□□ -1.76
SIN3B-208ENST00000596638 R4GN34 69 aa4.01□□□□□ -1.77
SIN3B-208ENST00000596638 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SIN3B-208ENST00000596638 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
SIN3B-208ENST00000596638 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
SIN3B-208ENST00000596638 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
SIN3B-208ENST00000596638 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
SIN3B-208ENST00000596638 M0R2T5 61 aa3.88□□□□□ -1.79
SIN3B-208ENST00000596638 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
SIN3B-208ENST00000596638 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
SIN3B-208ENST00000596638 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
SIN3B-208ENST00000596638 USH2AO75445 5202 aa3.8□□□□□ -1.8
SIN3B-208ENST00000596638 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
SIN3B-208ENST00000596638 MT2AP02795 61 aa3.75□□□□□ -1.81
SIN3B-208ENST00000596638 TNP1P09430 55 aa3.75□□□□□ -1.81
SIN3B-208ENST00000596638 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
SIN3B-208ENST00000596638 MT1FP04733 61 aa3.74□□□□□ -1.81
SIN3B-208ENST00000596638 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
SIN3B-208ENST00000596638 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
SIN3B-208ENST00000596638 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
SIN3B-208ENST00000596638 KRTAP10-10P60014 251 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 712.2 ms