RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
LIG1-210ENST00000596332 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
LIG1-210ENST00000596332 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
LIG1-210ENST00000596332 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
LIG1-210ENST00000596332 RBM12B-AS1Q9P1G2 102 aa5.21□□□□□ -1.58
LIG1-210ENST00000596332 V9GYY9 64 aa5.21□□□□□ -1.58
LIG1-210ENST00000596332 TRAV22A0A0B4J277 110 aa5.19□□□□□ -1.58
LIG1-210ENST00000596332 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
LIG1-210ENST00000596332 H0Y9P7 68 aa5.18□□□□□ -1.58
LIG1-210ENST00000596332 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
LIG1-210ENST00000596332 Q1T7F1 81 aa5.17□□□□□ -1.58
LIG1-210ENST00000596332 LINC00208Q96KT6 92 aa5.17□□□□□ -1.58
LIG1-210ENST00000596332 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
LIG1-210ENST00000596332 C1orf64Q8NEQ6 169 aa5.16□□□□□ -1.58
LIG1-210ENST00000596332 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
LIG1-210ENST00000596332 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
LIG1-210ENST00000596332 M0R2T5 61 aa5.12□□□□□ -1.59
LIG1-210ENST00000596332 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
LIG1-210ENST00000596332 MT2AP02795 61 aa5.08□□□□□ -1.6
LIG1-210ENST00000596332 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
LIG1-210ENST00000596332 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
LIG1-210ENST00000596332 MT1FP04733 61 aa5.04□□□□□ -1.6
LIG1-210ENST00000596332 LCA10Q71F78 164 aa5.01□□□□□ -1.61
LIG1-210ENST00000596332 COA5Q86WW8 74 aa5.01□□□□□ -1.61
LIG1-210ENST00000596332 PSPHP1O15172 72 aa4.99□□□□□ -1.61
LIG1-210ENST00000596332 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
LIG1-210ENST00000596332 A8MUN3 132 aa4.98□□□□□ -1.61
LIG1-210ENST00000596332 Q5VV11 94 aa4.97□□□□□ -1.61
LIG1-210ENST00000596332 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
LIG1-210ENST00000596332 S4R3F8 94 aa4.96□□□□□ -1.62
LIG1-210ENST00000596332 CHKB-CPT1BH3BT56 60 aa4.95□□□□□ -1.62
LIG1-210ENST00000596332 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
LIG1-210ENST00000596332 ACYP2P14621 99 aa4.93□□□□□ -1.62
LIG1-210ENST00000596332 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
LIG1-210ENST00000596332 DMAC1Q96GE9 116 aa4.93□□□□□ -1.62
LIG1-210ENST00000596332 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
LIG1-210ENST00000596332 A6NED7 52 aa4.9□□□□□ -1.63
LIG1-210ENST00000596332 CSAG1Q6PB30 78 aa4.9□□□□□ -1.63
LIG1-210ENST00000596332 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
LIG1-210ENST00000596332 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
LIG1-210ENST00000596332 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
LIG1-210ENST00000596332 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
LIG1-210ENST00000596332 USH2AO75445 5202 aa4.87□□□□□ -1.63
LIG1-210ENST00000596332 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
LIG1-210ENST00000596332 H0YAA0 97 aa4.81□□□□□ -1.64
LIG1-210ENST00000596332 SPTSSBQ8NFR3 76 aa4.8□□□□□ -1.64
LIG1-210ENST00000596332 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
LIG1-210ENST00000596332 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
LIG1-210ENST00000596332 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
LIG1-210ENST00000596332 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
LIG1-210ENST00000596332 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
LIG1-210ENST00000596332 A0A1B0GU69 56 aa4.76□□□□□ -1.65
LIG1-210ENST00000596332 A6NN06 94 aa4.74□□□□□ -1.65
LIG1-210ENST00000596332 SEC61GP60059 68 aa4.74□□□□□ -1.65
LIG1-210ENST00000596332 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
LIG1-210ENST00000596332 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
LIG1-210ENST00000596332 A8MU10 97 aa4.72□□□□□ -1.65
LIG1-210ENST00000596332 MT1BP07438 61 aa4.72□□□□□ -1.65
LIG1-210ENST00000596332 P0C880 135 aa4.72□□□□□ -1.65
LIG1-210ENST00000596332 LCE3BQ5TA77 95 aa4.72□□□□□ -1.65
LIG1-210ENST00000596332 UQCR11O14957 56 aa4.71□□□□□ -1.66
LIG1-210ENST00000596332 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
LIG1-210ENST00000596332 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
LIG1-210ENST00000596332 CRIPTQ9P021 101 aa4.68□□□□□ -1.66
LIG1-210ENST00000596332 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
LIG1-210ENST00000596332 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
LIG1-210ENST00000596332 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
LIG1-210ENST00000596332 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
LIG1-210ENST00000596332 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
LIG1-210ENST00000596332 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
LIG1-210ENST00000596332 R4GN34 69 aa4.54□□□□□ -1.68
LIG1-210ENST00000596332 M0QZ58 72 aa4.53□□□□□ -1.68
LIG1-210ENST00000596332 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
LIG1-210ENST00000596332 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
LIG1-210ENST00000596332 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
LIG1-210ENST00000596332 A0A1B0GU33 70 aa4.5□□□□□ -1.69
LIG1-210ENST00000596332 K7ERS5 55 aa4.48□□□□□ -1.69
LIG1-210ENST00000596332 MT1XP80297 61 aa4.47□□□□□ -1.69
LIG1-210ENST00000596332 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
LIG1-210ENST00000596332 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
LIG1-210ENST00000596332 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
LIG1-210ENST00000596332 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
LIG1-210ENST00000596332 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
LIG1-210ENST00000596332 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
LIG1-210ENST00000596332 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
LIG1-210ENST00000596332 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
LIG1-210ENST00000596332 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
LIG1-210ENST00000596332 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
LIG1-210ENST00000596332 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
LIG1-210ENST00000596332 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
LIG1-210ENST00000596332 A0A0D9SG42 100 aa4.3□□□□□ -1.72
LIG1-210ENST00000596332 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
LIG1-210ENST00000596332 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
LIG1-210ENST00000596332 ROMO1P60602 79 aa4.28□□□□□ -1.72
LIG1-210ENST00000596332 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
LIG1-210ENST00000596332 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
LIG1-210ENST00000596332 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
LIG1-210ENST00000596332 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
LIG1-210ENST00000596332 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
LIG1-210ENST00000596332 KMT2DO14686 5537 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms