RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 M0R2T5 61 aa9.65□□□□□ -0.86
PNKP-207ENST00000596014 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
PNKP-207ENST00000596014 Q1T7F1 81 aa9.57□□□□□ -0.88
PNKP-207ENST00000596014 ACYP2P14621 99 aa9.55□□□□□ -0.88
PNKP-207ENST00000596014 KRTAP10-6P60371 365 aaPredicted RBP9.55□□□□□ -0.88
PNKP-207ENST00000596014 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
PNKP-207ENST00000596014 V9GYY9 64 aa9.51□□□□□ -0.89
PNKP-207ENST00000596014 PRO0628Q9UI54 55 aa9.51□□□□□ -0.89
PNKP-207ENST00000596014 H1FX-AS1Q4G0G2 97 aa9.48□□□□□ -0.89
PNKP-207ENST00000596014 CHKB-CPT1BH3BT56 60 aa9.45□□□□□ -0.9
PNKP-207ENST00000596014 A8MUN3 132 aa9.41□□□□□ -0.9
PNKP-207ENST00000596014 KRTAP3-1Q9BYR8 98 aa9.41□□□□□ -0.9
PNKP-207ENST00000596014 PSPHP1O15172 72 aa9.4□□□□□ -0.9
PNKP-207ENST00000596014 LINC01558Q9Y6Z2 57 aa9.38□□□□□ -0.91
PNKP-207ENST00000596014 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
PNKP-207ENST00000596014 KRTAP9-8Q9BYQ0 159 aa9.35□□□□□ -0.91
PNKP-207ENST00000596014 Q5VV11 94 aa9.33□□□□□ -0.92
PNKP-207ENST00000596014 BRK1Q8WUW1 75 aa9.32□□□□□ -0.92
PNKP-207ENST00000596014 KRTAP9-2Q9BYQ4 174 aa9.31□□□□□ -0.92
PNKP-207ENST00000596014 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
PNKP-207ENST00000596014 MT2AP02795 61 aa9.25□□□□□ -0.93
PNKP-207ENST00000596014 S4R3F8 94 aa9.23□□□□□ -0.93
PNKP-207ENST00000596014 LCA10Q71F78 164 aa9.19□□□□□ -0.94
PNKP-207ENST00000596014 MT1FP04733 61 aa9.18□□□□□ -0.94
PNKP-207ENST00000596014 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
PNKP-207ENST00000596014 KRTAP10-10P60014 251 aa9.15□□□□□ -0.94
PNKP-207ENST00000596014 A0A1B0GU69 56 aa9.14□□□□□ -0.95
PNKP-207ENST00000596014 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
PNKP-207ENST00000596014 A6NED7 52 aa9.11□□□□□ -0.95
PNKP-207ENST00000596014 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
PNKP-207ENST00000596014 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
PNKP-207ENST00000596014 KRTAP9-3Q9BYQ3 159 aa9.04□□□□□ -0.96
PNKP-207ENST00000596014 CDC42SE1Q9NRR8 79 aa9.01□□□□□ -0.97
PNKP-207ENST00000596014 A8MU10 97 aa9□□□□□ -0.97
PNKP-207ENST00000596014 SEC61GP60059 68 aa8.97□□□□□ -0.97
PNKP-207ENST00000596014 LCE2BO14633 110 aa8.91□□□□□ -0.98
PNKP-207ENST00000596014 UQCR11O14957 56 aa8.9□□□□□ -0.98
PNKP-207ENST00000596014 PMAIP1Q13794 54 aa8.89□□□□□ -0.99
PNKP-207ENST00000596014 USH2AO75445 5202 aa8.88□□□□□ -0.99
PNKP-207ENST00000596014 CRCT1Q9UGL9 99 aa8.87□□□□□ -0.99
PNKP-207ENST00000596014 KRTAP9-6A0A140TA67 174 aa8.85□□□□□ -0.99
PNKP-207ENST00000596014 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
PNKP-207ENST00000596014 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
PNKP-207ENST00000596014 H0YAA0 97 aa8.82□□□□□ -1
PNKP-207ENST00000596014 A0A1B0GU33 70 aa8.75□□□□□ -1.01
PNKP-207ENST00000596014 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
PNKP-207ENST00000596014 ADM2Q7Z4H4 148 aa8.75□□□□□ -1.01
PNKP-207ENST00000596014 A6NN06 94 aa8.74□□□□□ -1.01
PNKP-207ENST00000596014 SSPOA2VEC9 5147 aa8.74□□□□□ -1.01
PNKP-207ENST00000596014 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.02
PNKP-207ENST00000596014 KTN1-AS1Q86SY8 53 aa8.7□□□□□ -1.02
PNKP-207ENST00000596014 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
PNKP-207ENST00000596014 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
PNKP-207ENST00000596014 P0C880 135 aa8.61□□□□□ -1.03
PNKP-207ENST00000596014 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
PNKP-207ENST00000596014 MT1BP07438 61 aa8.53□□□□□ -1.04
PNKP-207ENST00000596014 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
PNKP-207ENST00000596014 KRTAP19-6Q3LI70 58 aa8.52□□□□□ -1.05
PNKP-207ENST00000596014 R4GN34 69 aa8.49□□□□□ -1.05
PNKP-207ENST00000596014 FCGBPQ9Y6R7 5405 aaPredicted RBP8.47□□□□□ -1.05
PNKP-207ENST00000596014 M0QZ58 72 aa8.43□□□□□ -1.06
PNKP-207ENST00000596014 A0A0D9SG42 100 aa8.38□□□□□ -1.07
PNKP-207ENST00000596014 K7ERS5 55 aa8.37□□□□□ -1.07
PNKP-207ENST00000596014 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
PNKP-207ENST00000596014 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
PNKP-207ENST00000596014 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
PNKP-207ENST00000596014 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
PNKP-207ENST00000596014 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.23□□□□□ -1.09
PNKP-207ENST00000596014 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
PNKP-207ENST00000596014 KRTAP12-2P59991 146 aa8.21□□□□□ -1.1
PNKP-207ENST00000596014 PRAC1Q96KF2 57 aa8.18□□□□□ -1.1
PNKP-207ENST00000596014 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
PNKP-207ENST00000596014 SYNE2Q8WXH0 6885 aaKnown RBP8.11□□□□□ -1.11
PNKP-207ENST00000596014 MT1XP80297 61 aa8.1□□□□□ -1.11
PNKP-207ENST00000596014 ROMO1P60602 79 aa8.08□□□□□ -1.12
PNKP-207ENST00000596014 PRO2289Q9P1D8 64 aa8.08□□□□□ -1.12
PNKP-207ENST00000596014 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
PNKP-207ENST00000596014 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
PNKP-207ENST00000596014 CAMK2N1Q7Z7J9 78 aa7.86□□□□□ -1.15
PNKP-207ENST00000596014 KRTAP6-3Q3LI67 103 aa7.83□□□□□ -1.16
PNKP-207ENST00000596014 KMT2DO14686 5537 aa7.77□□□□□ -1.17
PNKP-207ENST00000596014 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
PNKP-207ENST00000596014 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
PNKP-207ENST00000596014 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
PNKP-207ENST00000596014 KRTAP5-9P26371 169 aa7.64□□□□□ -1.19
PNKP-207ENST00000596014 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
PNKP-207ENST00000596014 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
PNKP-207ENST00000596014 KRTAP8-1Q8IUC2 63 aa7.6□□□□□ -1.19
PNKP-207ENST00000596014 MUC12Q9UKN1 5478 aa7.57□□□□□ -1.2
PNKP-207ENST00000596014 NEBP20929 6669 aa7.53□□□□□ -1.2
PNKP-207ENST00000596014 SPRR2FQ96RM1 72 aa7.51□□□□□ -1.21
PNKP-207ENST00000596014 TNP1P09430 55 aa7.44□□□□□ -1.22
PNKP-207ENST00000596014 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
PNKP-207ENST00000596014 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
PNKP-207ENST00000596014 SPRR2EP22531 72 aa7.29□□□□□ -1.24
PNKP-207ENST00000596014 SPRR2BP35325 72 aa7.29□□□□□ -1.24
PNKP-207ENST00000596014 SPRR2AP35326 72 aa7.29□□□□□ -1.24
PNKP-207ENST00000596014 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
PNKP-207ENST00000596014 LCE1AQ5T7P2 110 aa7.27□□□□□ -1.25
PNKP-207ENST00000596014 KRTAP19-7Q3SYF9 63 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms