RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 LCA10Q71F78 164 aa7.7□□□□□ -1.18
PAF1-204ENST00000595564 A6NN06 94 aa7.69□□□□□ -1.18
PAF1-204ENST00000595564 J3QL48 77 aa7.68□□□□□ -1.18
PAF1-204ENST00000595564 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
PAF1-204ENST00000595564 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
PAF1-204ENST00000595564 HMCN2Q8NDA2 5059 aa7.64□□□□□ -1.19
PAF1-204ENST00000595564 KRTAP3-1Q9BYR8 98 aa7.57□□□□□ -1.2
PAF1-204ENST00000595564 LPAP08519 4548 aa7.55□□□□□ -1.2
PAF1-204ENST00000595564 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
PAF1-204ENST00000595564 LRP2P98164 4655 aa7.52□□□□□ -1.2
PAF1-204ENST00000595564 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
PAF1-204ENST00000595564 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
PAF1-204ENST00000595564 A0A1B0GU69 56 aa7.41□□□□□ -1.22
PAF1-204ENST00000595564 S4R3F8 94 aa7.32□□□□□ -1.24
PAF1-204ENST00000595564 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
PAF1-204ENST00000595564 SPATA8Q6RVD6 105 aa7.29□□□□□ -1.24
PAF1-204ENST00000595564 PRAC1Q96KF2 57 aa7.29□□□□□ -1.24
PAF1-204ENST00000595564 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
PAF1-204ENST00000595564 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
PAF1-204ENST00000595564 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
PAF1-204ENST00000595564 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
PAF1-204ENST00000595564 RNF213Q63HN8 5207 aa7.26□□□□□ -1.25
PAF1-204ENST00000595564 UQCR11O14957 56 aa7.23□□□□□ -1.25
PAF1-204ENST00000595564 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
PAF1-204ENST00000595564 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.26
PAF1-204ENST00000595564 A0A1B0GU33 70 aa7.13□□□□□ -1.27
PAF1-204ENST00000595564 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
PAF1-204ENST00000595564 H3BS24 57 aa7.09□□□□□ -1.27
PAF1-204ENST00000595564 KRTAP10-6P60371 365 aaPredicted RBP7.08□□□□□ -1.28
PAF1-204ENST00000595564 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
PAF1-204ENST00000595564 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
PAF1-204ENST00000595564 MUC2Q02817 5179 aa7.05□□□□□ -1.28
PAF1-204ENST00000595564 H0YAA0 97 aa7.04□□□□□ -1.28
PAF1-204ENST00000595564 P0C880 135 aa7.01□□□□□ -1.29
PAF1-204ENST00000595564 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
PAF1-204ENST00000595564 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
PAF1-204ENST00000595564 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
PAF1-204ENST00000595564 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
PAF1-204ENST00000595564 A0A0D9SG42 100 aa6.85□□□□□ -1.31
PAF1-204ENST00000595564 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
PAF1-204ENST00000595564 M0QZ58 72 aa6.81□□□□□ -1.32
PAF1-204ENST00000595564 ROMO1P60602 79 aa6.81□□□□□ -1.32
PAF1-204ENST00000595564 K7ERS5 55 aa6.78□□□□□ -1.32
PAF1-204ENST00000595564 R4GN34 69 aa6.76□□□□□ -1.33
PAF1-204ENST00000595564 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
PAF1-204ENST00000595564 MT1HP80294 61 aa6.7□□□□□ -1.34
PAF1-204ENST00000595564 M0R2T5 61 aa6.69□□□□□ -1.34
PAF1-204ENST00000595564 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
PAF1-204ENST00000595564 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
PAF1-204ENST00000595564 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
PAF1-204ENST00000595564 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
PAF1-204ENST00000595564 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
PAF1-204ENST00000595564 MT2AP02795 61 aa6.48□□□□□ -1.37
PAF1-204ENST00000595564 KRTAP9-8Q9BYQ0 159 aa6.47□□□□□ -1.37
PAF1-204ENST00000595564 MT1FP04733 61 aa6.46□□□□□ -1.38
PAF1-204ENST00000595564 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
PAF1-204ENST00000595564 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
PAF1-204ENST00000595564 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
PAF1-204ENST00000595564 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
PAF1-204ENST00000595564 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
PAF1-204ENST00000595564 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
PAF1-204ENST00000595564 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
PAF1-204ENST00000595564 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
PAF1-204ENST00000595564 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
PAF1-204ENST00000595564 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
PAF1-204ENST00000595564 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
PAF1-204ENST00000595564 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
PAF1-204ENST00000595564 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
PAF1-204ENST00000595564 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
PAF1-204ENST00000595564 MT1BP07438 61 aa6.14□□□□□ -1.43
PAF1-204ENST00000595564 TNP1P09430 55 aa6.06□□□□□ -1.44
PAF1-204ENST00000595564 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
PAF1-204ENST00000595564 USH2AO75445 5202 aa6.06□□□□□ -1.44
PAF1-204ENST00000595564 LCE2BO14633 110 aa6.04□□□□□ -1.44
PAF1-204ENST00000595564 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
PAF1-204ENST00000595564 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
PAF1-204ENST00000595564 MT1XP80297 61 aa5.99□□□□□ -1.45
PAF1-204ENST00000595564 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
PAF1-204ENST00000595564 A0A0A0MQY5 61 aa5.91□□□□□ -1.46
PAF1-204ENST00000595564 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
PAF1-204ENST00000595564 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
PAF1-204ENST00000595564 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
PAF1-204ENST00000595564 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
PAF1-204ENST00000595564 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
PAF1-204ENST00000595564 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
PAF1-204ENST00000595564 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
PAF1-204ENST00000595564 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
PAF1-204ENST00000595564 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
PAF1-204ENST00000595564 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
PAF1-204ENST00000595564 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
PAF1-204ENST00000595564 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
PAF1-204ENST00000595564 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
PAF1-204ENST00000595564 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
PAF1-204ENST00000595564 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
PAF1-204ENST00000595564 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
PAF1-204ENST00000595564 KMT2DO14686 5537 aa5.51□□□□□ -1.53
PAF1-204ENST00000595564 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
PAF1-204ENST00000595564 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.53
PAF1-204ENST00000595564 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
PAF1-204ENST00000595564 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms