RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 RBM12B-AS1Q9P1G2 102 aa7.67□□□□□ -1.18
VRK3-207ENST00000594092 MUC2Q02817 5179 aa7.67□□□□□ -1.18
VRK3-207ENST00000594092 PSPHP1O15172 72 aa7.63□□□□□ -1.19
VRK3-207ENST00000594092 RNF213Q63HN8 5207 aa7.62□□□□□ -1.19
VRK3-207ENST00000594092 SPTSSBQ8NFR3 76 aa7.62□□□□□ -1.19
VRK3-207ENST00000594092 H1FX-AS1Q4G0G2 97 aa7.58□□□□□ -1.2
VRK3-207ENST00000594092 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
VRK3-207ENST00000594092 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
VRK3-207ENST00000594092 Q5VV11 94 aa7.56□□□□□ -1.2
VRK3-207ENST00000594092 S4R3F8 94 aa7.55□□□□□ -1.2
VRK3-207ENST00000594092 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
VRK3-207ENST00000594092 LCA10Q71F78 164 aa7.51□□□□□ -1.21
VRK3-207ENST00000594092 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
VRK3-207ENST00000594092 A0A1B0GU69 56 aa7.46□□□□□ -1.21
VRK3-207ENST00000594092 PMAIP1Q13794 54 aa7.46□□□□□ -1.21
VRK3-207ENST00000594092 FLGP20930 4061 aaPredicted RBP7.44□□□□□ -1.22
VRK3-207ENST00000594092 A6NED7 52 aa7.44□□□□□ -1.22
VRK3-207ENST00000594092 SEC61GP60059 68 aa7.43□□□□□ -1.22
VRK3-207ENST00000594092 LCE2CQ5TA81 110 aa7.43□□□□□ -1.22
VRK3-207ENST00000594092 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.23
VRK3-207ENST00000594092 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
VRK3-207ENST00000594092 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
VRK3-207ENST00000594092 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
VRK3-207ENST00000594092 A8MU10 97 aa7.28□□□□□ -1.24
VRK3-207ENST00000594092 MT1HP80294 61 aa7.27□□□□□ -1.25
VRK3-207ENST00000594092 UQCR11O14957 56 aa7.24□□□□□ -1.25
VRK3-207ENST00000594092 A6NN06 94 aa7.24□□□□□ -1.25
VRK3-207ENST00000594092 A0A1B0GU33 70 aa7.22□□□□□ -1.25
VRK3-207ENST00000594092 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.26
VRK3-207ENST00000594092 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
VRK3-207ENST00000594092 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
VRK3-207ENST00000594092 H0YAA0 97 aa7.2□□□□□ -1.26
VRK3-207ENST00000594092 M0R2T5 61 aa7.18□□□□□ -1.26
VRK3-207ENST00000594092 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
VRK3-207ENST00000594092 P0C880 135 aa7.15□□□□□ -1.27
VRK3-207ENST00000594092 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
VRK3-207ENST00000594092 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
VRK3-207ENST00000594092 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
VRK3-207ENST00000594092 M0QZ58 72 aa7□□□□□ -1.29
VRK3-207ENST00000594092 KRTAP9-8Q9BYQ0 159 aa7□□□□□ -1.29
VRK3-207ENST00000594092 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
VRK3-207ENST00000594092 MT2AP02795 61 aa6.97□□□□□ -1.29
VRK3-207ENST00000594092 R4GN34 69 aa6.96□□□□□ -1.3
VRK3-207ENST00000594092 MT1FP04733 61 aa6.93□□□□□ -1.3
VRK3-207ENST00000594092 A0A0D9SG42 100 aa6.92□□□□□ -1.3
VRK3-207ENST00000594092 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
VRK3-207ENST00000594092 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
VRK3-207ENST00000594092 K7ERS5 55 aa6.86□□□□□ -1.31
VRK3-207ENST00000594092 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
VRK3-207ENST00000594092 PRAC1Q96KF2 57 aa6.79□□□□□ -1.32
VRK3-207ENST00000594092 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
VRK3-207ENST00000594092 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
VRK3-207ENST00000594092 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
VRK3-207ENST00000594092 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
VRK3-207ENST00000594092 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
VRK3-207ENST00000594092 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
VRK3-207ENST00000594092 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
VRK3-207ENST00000594092 LCE2BO14633 110 aa6.58□□□□□ -1.36
VRK3-207ENST00000594092 ROMO1P60602 79 aa6.56□□□□□ -1.36
VRK3-207ENST00000594092 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
VRK3-207ENST00000594092 MT1BP07438 61 aa6.55□□□□□ -1.36
VRK3-207ENST00000594092 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
VRK3-207ENST00000594092 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
VRK3-207ENST00000594092 USH2AO75445 5202 aa6.46□□□□□ -1.38
VRK3-207ENST00000594092 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
VRK3-207ENST00000594092 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
VRK3-207ENST00000594092 MT1XP80297 61 aa6.32□□□□□ -1.4
VRK3-207ENST00000594092 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
VRK3-207ENST00000594092 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
VRK3-207ENST00000594092 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
VRK3-207ENST00000594092 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
VRK3-207ENST00000594092 TNP1P09430 55 aa6.22□□□□□ -1.41
VRK3-207ENST00000594092 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
VRK3-207ENST00000594092 H3BS24 57 aa6.16□□□□□ -1.42
VRK3-207ENST00000594092 FSIP2Q5CZC0 6907 aa6.15□□□□□ -1.43
VRK3-207ENST00000594092 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
VRK3-207ENST00000594092 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
VRK3-207ENST00000594092 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
VRK3-207ENST00000594092 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
VRK3-207ENST00000594092 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
VRK3-207ENST00000594092 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
VRK3-207ENST00000594092 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
VRK3-207ENST00000594092 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
VRK3-207ENST00000594092 KMT2DO14686 5537 aa5.87□□□□□ -1.47
VRK3-207ENST00000594092 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
VRK3-207ENST00000594092 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
VRK3-207ENST00000594092 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
VRK3-207ENST00000594092 NDUFAF8A1L188 74 aa5.78□□□□□ -1.48
VRK3-207ENST00000594092 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
VRK3-207ENST00000594092 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
VRK3-207ENST00000594092 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
VRK3-207ENST00000594092 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
VRK3-207ENST00000594092 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
VRK3-207ENST00000594092 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
VRK3-207ENST00000594092 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
VRK3-207ENST00000594092 MT1EP04732 61 aa5.54□□□□□ -1.52
VRK3-207ENST00000594092 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
VRK3-207ENST00000594092 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
VRK3-207ENST00000594092 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
VRK3-207ENST00000594092 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms