RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 SMIM26A0A096LP01 95 aa6.5□□□□□ -1.37
CACNA1A-212ENST00000593160 MPLKIPQ8TAP9 179 aa6.5□□□□□ -1.37
CACNA1A-212ENST00000593160 KRTAP4-1Q9BYQ7 146 aa6.49□□□□□ -1.37
CACNA1A-212ENST00000593160 PRO0628Q9UI54 55 aa6.46□□□□□ -1.37
CACNA1A-212ENST00000593160 CHKB-CPT1BH3BT56 60 aa6.45□□□□□ -1.38
CACNA1A-212ENST00000593160 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
CACNA1A-212ENST00000593160 Q1T7F1 81 aa6.39□□□□□ -1.39
CACNA1A-212ENST00000593160 UBR4Q5T4S7 5183 aa6.37□□□□□ -1.39
CACNA1A-212ENST00000593160 MUC2Q02817 5179 aa6.36□□□□□ -1.39
CACNA1A-212ENST00000593160 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
CACNA1A-212ENST00000593160 RNF213Q63HN8 5207 aa6.35□□□□□ -1.39
CACNA1A-212ENST00000593160 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
CACNA1A-212ENST00000593160 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
CACNA1A-212ENST00000593160 LCA10Q71F78 164 aa6.33□□□□□ -1.4
CACNA1A-212ENST00000593160 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
CACNA1A-212ENST00000593160 S4R3F8 94 aa6.32□□□□□ -1.4
CACNA1A-212ENST00000593160 SPTSSBQ8NFR3 76 aa6.3□□□□□ -1.4
CACNA1A-212ENST00000593160 PSPHP1O15172 72 aa6.26□□□□□ -1.41
CACNA1A-212ENST00000593160 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
CACNA1A-212ENST00000593160 Q5VV11 94 aa6.23□□□□□ -1.41
CACNA1A-212ENST00000593160 LCE2AQ5TA79 106 aaPredicted RBP6.23□□□□□ -1.41
CACNA1A-212ENST00000593160 A0A1B0GU69 56 aa6.2□□□□□ -1.42
CACNA1A-212ENST00000593160 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
CACNA1A-212ENST00000593160 PMAIP1Q13794 54 aa6.17□□□□□ -1.42
CACNA1A-212ENST00000593160 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
CACNA1A-212ENST00000593160 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
CACNA1A-212ENST00000593160 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
CACNA1A-212ENST00000593160 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
CACNA1A-212ENST00000593160 H0YAA0 97 aa6.07□□□□□ -1.44
CACNA1A-212ENST00000593160 A6NED7 52 aa6.06□□□□□ -1.44
CACNA1A-212ENST00000593160 P0C880 135 aa6.04□□□□□ -1.44
CACNA1A-212ENST00000593160 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
CACNA1A-212ENST00000593160 MT1HP80294 61 aa6.03□□□□□ -1.44
CACNA1A-212ENST00000593160 UQCR11O14957 56 aa6.01□□□□□ -1.45
CACNA1A-212ENST00000593160 A0A1B0GU33 70 aa6.01□□□□□ -1.45
CACNA1A-212ENST00000593160 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
CACNA1A-212ENST00000593160 A8MU10 97 aa5.99□□□□□ -1.45
CACNA1A-212ENST00000593160 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
CACNA1A-212ENST00000593160 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
CACNA1A-212ENST00000593160 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
CACNA1A-212ENST00000593160 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
CACNA1A-212ENST00000593160 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
CACNA1A-212ENST00000593160 M0R2T5 61 aa5.9□□□□□ -1.47
CACNA1A-212ENST00000593160 M0QZ58 72 aa5.85□□□□□ -1.47
CACNA1A-212ENST00000593160 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
CACNA1A-212ENST00000593160 R4GN34 69 aa5.81□□□□□ -1.48
CACNA1A-212ENST00000593160 MT2AP02795 61 aa5.8□□□□□ -1.48
CACNA1A-212ENST00000593160 A0A0D9SG42 100 aa5.77□□□□□ -1.49
CACNA1A-212ENST00000593160 MT1FP04733 61 aa5.77□□□□□ -1.49
CACNA1A-212ENST00000593160 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
CACNA1A-212ENST00000593160 CRIPTQ9P021 101 aa5.77□□□□□ -1.49
CACNA1A-212ENST00000593160 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
CACNA1A-212ENST00000593160 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
CACNA1A-212ENST00000593160 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
CACNA1A-212ENST00000593160 A6NN06 94 aa5.69□□□□□ -1.5
CACNA1A-212ENST00000593160 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
CACNA1A-212ENST00000593160 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
CACNA1A-212ENST00000593160 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
CACNA1A-212ENST00000593160 K7ERS5 55 aa5.64□□□□□ -1.51
CACNA1A-212ENST00000593160 SPINT4Q6UDR6 99 aa5.63□□□□□ -1.51
CACNA1A-212ENST00000593160 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
CACNA1A-212ENST00000593160 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
CACNA1A-212ENST00000593160 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
CACNA1A-212ENST00000593160 MT1BP07438 61 aa5.47□□□□□ -1.53
CACNA1A-212ENST00000593160 ROMO1P60602 79 aa5.45□□□□□ -1.54
CACNA1A-212ENST00000593160 CAMK2N1Q7Z7J9 78 aa5.43□□□□□ -1.54
CACNA1A-212ENST00000593160 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
CACNA1A-212ENST00000593160 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.55
CACNA1A-212ENST00000593160 USH2AO75445 5202 aa5.38□□□□□ -1.55
CACNA1A-212ENST00000593160 MT1XP80297 61 aa5.3□□□□□ -1.56
CACNA1A-212ENST00000593160 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
CACNA1A-212ENST00000593160 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
CACNA1A-212ENST00000593160 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
CACNA1A-212ENST00000593160 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
CACNA1A-212ENST00000593160 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
CACNA1A-212ENST00000593160 TNP1P09430 55 aa5.18□□□□□ -1.58
CACNA1A-212ENST00000593160 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
CACNA1A-212ENST00000593160 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
CACNA1A-212ENST00000593160 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
CACNA1A-212ENST00000593160 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
CACNA1A-212ENST00000593160 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
CACNA1A-212ENST00000593160 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
CACNA1A-212ENST00000593160 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
CACNA1A-212ENST00000593160 LCE3AQ5TA76 89 aa5□□□□□ -1.61
CACNA1A-212ENST00000593160 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
CACNA1A-212ENST00000593160 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
CACNA1A-212ENST00000593160 KMT2DO14686 5537 aa4.92□□□□□ -1.62
CACNA1A-212ENST00000593160 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.62
CACNA1A-212ENST00000593160 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
CACNA1A-212ENST00000593160 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
CACNA1A-212ENST00000593160 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
CACNA1A-212ENST00000593160 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
CACNA1A-212ENST00000593160 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
CACNA1A-212ENST00000593160 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
CACNA1A-212ENST00000593160 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
CACNA1A-212ENST00000593160 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
CACNA1A-212ENST00000593160 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
CACNA1A-212ENST00000593160 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
CACNA1A-212ENST00000593160 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
CACNA1A-212ENST00000593160 MT1EP04732 61 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms