RNA–Protein interactions for RNA: ENST00000592113.5

PTBP1-217, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-217ENST00000592113 LCA10Q71F78 164 aa10.99□□□□□ -0.65
PTBP1-217ENST00000592113 ATP5EP56381 51 aaPredicted RBP10.98□□□□□ -0.65
PTBP1-217ENST00000592113 TMEM258P61165 79 aa10.97□□□□□ -0.65
PTBP1-217ENST00000592113 LCE2AQ5TA79 106 aaPredicted RBP10.97□□□□□ -0.65
PTBP1-217ENST00000592113 CHKB-CPT1BH3BT56 60 aa10.94□□□□□ -0.66
PTBP1-217ENST00000592113 CSAG1Q6PB30 78 aa10.9□□□□□ -0.66
PTBP1-217ENST00000592113 COA5Q86WW8 74 aa10.84□□□□□ -0.67
PTBP1-217ENST00000592113 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
PTBP1-217ENST00000592113 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
PTBP1-217ENST00000592113 KRTAP10-6P60371 365 aaPredicted RBP10.78□□□□□ -0.68
PTBP1-217ENST00000592113 LORP23490 312 aaPredicted RBP10.71□□□□□ -0.69
PTBP1-217ENST00000592113 SERP1Q9Y6X1 66 aa10.6□□□□□ -0.71
PTBP1-217ENST00000592113 KRTAP9-8Q9BYQ0 159 aa10.59□□□□□ -0.71
PTBP1-217ENST00000592113 H0YAA0 97 aa10.58□□□□□ -0.72
PTBP1-217ENST00000592113 MT2AP02795 61 aa10.55□□□□□ -0.72
PTBP1-217ENST00000592113 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
PTBP1-217ENST00000592113 ADM2Q7Z4H4 148 aa10.51□□□□□ -0.73
PTBP1-217ENST00000592113 MT1FP04733 61 aa10.47□□□□□ -0.73
PTBP1-217ENST00000592113 SEC61GP60059 68 aa10.43□□□□□ -0.74
PTBP1-217ENST00000592113 CRIPTQ9P021 101 aa10.34□□□□□ -0.75
PTBP1-217ENST00000592113 RPS28P62857 69 aaKnown RBP10.33□□□□□ -0.76
PTBP1-217ENST00000592113 P0C880 135 aa10.33□□□□□ -0.76
PTBP1-217ENST00000592113 KRTAP3-2Q9BYR7 98 aa10.33□□□□□ -0.76
PTBP1-217ENST00000592113 A0A1B0GU69 56 aa10.32□□□□□ -0.76
PTBP1-217ENST00000592113 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
PTBP1-217ENST00000592113 SMIM26A0A096LP01 95 aa10.25□□□□□ -0.77
PTBP1-217ENST00000592113 LINC01558Q9Y6Z2 57 aa10.25□□□□□ -0.77
PTBP1-217ENST00000592113 V9GYY9 64 aa10.24□□□□□ -0.77
PTBP1-217ENST00000592113 R4GN34 69 aa10.23□□□□□ -0.77
PTBP1-217ENST00000592113 KRTAP9-3Q9BYQ3 159 aa10.23□□□□□ -0.77
PTBP1-217ENST00000592113 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
PTBP1-217ENST00000592113 M0QZ58 72 aa10.17□□□□□ -0.78
PTBP1-217ENST00000592113 Q1T7F1 81 aa10.14□□□□□ -0.79
PTBP1-217ENST00000592113 SPRR2GQ9BYE4 73 aa10.14□□□□□ -0.79
PTBP1-217ENST00000592113 A0A1B0GU33 70 aa10.11□□□□□ -0.79
PTBP1-217ENST00000592113 KRTAP19-1Q8IUB9 90 aa10.1□□□□□ -0.79
PTBP1-217ENST00000592113 KRTAP9-2Q9BYQ4 174 aa10.02□□□□□ -0.81
PTBP1-217ENST00000592113 LCE2BO14633 110 aa10□□□□□ -0.81
PTBP1-217ENST00000592113 PSPHP1O15172 72 aa10□□□□□ -0.81
PTBP1-217ENST00000592113 Q5VV11 94 aa9.99□□□□□ -0.81
PTBP1-217ENST00000592113 LINC01554Q52M75 96 aa9.98□□□□□ -0.81
PTBP1-217ENST00000592113 KRTAP13-4Q3LI77 160 aa9.94□□□□□ -0.82
PTBP1-217ENST00000592113 KRTAP19-8Q3LI54 63 aa9.92□□□□□ -0.82
PTBP1-217ENST00000592113 UQCR11O14957 56 aa9.92□□□□□ -0.82
PTBP1-217ENST00000592113 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
PTBP1-217ENST00000592113 USH2AO75445 5202 aa9.85□□□□□ -0.83
PTBP1-217ENST00000592113 A0A0D9SG42 100 aa9.81□□□□□ -0.84
PTBP1-217ENST00000592113 PLAC4Q8WY50 150 aa9.8□□□□□ -0.84
PTBP1-217ENST00000592113 A6NN06 94 aa9.79□□□□□ -0.84
PTBP1-217ENST00000592113 MT1BP07438 61 aa9.79□□□□□ -0.84
PTBP1-217ENST00000592113 A6NED7 52 aa9.76□□□□□ -0.85
PTBP1-217ENST00000592113 MIR22HGQ0VDD5 57 aa9.75□□□□□ -0.85
PTBP1-217ENST00000592113 FSIP2Q5CZC0 6907 aa9.73□□□□□ -0.85
PTBP1-217ENST00000592113 A8MU10 97 aa9.69□□□□□ -0.86
PTBP1-217ENST00000592113 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
PTBP1-217ENST00000592113 SSPOA2VEC9 5147 aa9.62□□□□□ -0.87
PTBP1-217ENST00000592113 CRCT1Q9UGL9 99 aa9.61□□□□□ -0.87
PTBP1-217ENST00000592113 KRTAP12-1P59990 96 aa9.57□□□□□ -0.88
PTBP1-217ENST00000592113 KRTAP19-6Q3LI70 58 aa9.56□□□□□ -0.88
PTBP1-217ENST00000592113 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
PTBP1-217ENST00000592113 KRTAP12-2P59991 146 aa9.52□□□□□ -0.88
PTBP1-217ENST00000592113 PRO2289Q9P1D8 64 aa9.51□□□□□ -0.89
PTBP1-217ENST00000592113 K7ERS5 55 aa9.5□□□□□ -0.89
PTBP1-217ENST00000592113 CDC42SE1Q9NRR8 79 aa9.48□□□□□ -0.89
PTBP1-217ENST00000592113 KRTAP10-5P60370 271 aa9.44□□□□□ -0.9
PTBP1-217ENST00000592113 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
PTBP1-217ENST00000592113 MT1XP80297 61 aa9.39□□□□□ -0.91
PTBP1-217ENST00000592113 BRK1Q8WUW1 75 aa9.3□□□□□ -0.92
PTBP1-217ENST00000592113 FCGBPQ9Y6R7 5405 aaPredicted RBP9.28□□□□□ -0.92
PTBP1-217ENST00000592113 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
PTBP1-217ENST00000592113 TNP1P09430 55 aa8.99□□□□□ -0.97
PTBP1-217ENST00000592113 KRTAP10-7P60409 375 aaPredicted RBP8.98□□□□□ -0.97
PTBP1-217ENST00000592113 KRTAP10-12P60413 245 aa8.94□□□□□ -0.98
PTBP1-217ENST00000592113 MACF1Q9UPN3 7388 aaKnown RBP8.92□□□□□ -0.98
PTBP1-217ENST00000592113 ROMO1P60602 79 aa8.92□□□□□ -0.98
PTBP1-217ENST00000592113 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.9□□□□□ -0.99
PTBP1-217ENST00000592113 KRTAP25-1Q3LHN0 102 aa8.86□□□□□ -0.99
PTBP1-217ENST00000592113 PRO0628Q9UI54 55 aa8.83□□□□□ -1
PTBP1-217ENST00000592113 KMT2DO14686 5537 aa8.77□□□□□ -1.01
PTBP1-217ENST00000592113 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
PTBP1-217ENST00000592113 SYNE2Q8WXH0 6885 aaKnown RBP8.72□□□□□ -1.01
PTBP1-217ENST00000592113 KRTAP4-8A0A0G2JLE6 195 aa8.72□□□□□ -1.01
PTBP1-217ENST00000592113 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
PTBP1-217ENST00000592113 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
PTBP1-217ENST00000592113 LCE3AQ5TA76 89 aa8.61□□□□□ -1.03
PTBP1-217ENST00000592113 KRTAP6-3Q3LI67 103 aa8.58□□□□□ -1.04
PTBP1-217ENST00000592113 KRTAP9-7A8MTY7 169 aa8.57□□□□□ -1.04
PTBP1-217ENST00000592113 KRTAP23-1A1A580 65 aa8.54□□□□□ -1.04
PTBP1-217ENST00000592113 KRTAP5-9P26371 169 aa8.5□□□□□ -1.05
PTBP1-217ENST00000592113 SPRR2FQ96RM1 72 aa8.49□□□□□ -1.05
PTBP1-217ENST00000592113 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
PTBP1-217ENST00000592113 KRTAP19-5Q3LI72 72 aa8.39□□□□□ -1.07
PTBP1-217ENST00000592113 KRTAP19-7Q3SYF9 63 aa8.37□□□□□ -1.07
PTBP1-217ENST00000592113 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
PTBP1-217ENST00000592113 MUC12Q9UKN1 5478 aa8.29□□□□□ -1.08
PTBP1-217ENST00000592113 MT1EP04732 61 aa8.28□□□□□ -1.08
PTBP1-217ENST00000592113 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
PTBP1-217ENST00000592113 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
PTBP1-217ENST00000592113 SPRR2EP22531 72 aa8.18□□□□□ -1.1
PTBP1-217ENST00000592113 SPRR2BP35325 72 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms