RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 KLKP1Q107X0 134 aa9.62□□□□□ -0.87
ERCC2-212ENST00000591309 NDUFC1O43677 76 aa9.57□□□□□ -0.88
ERCC2-212ENST00000591309 SMIM20Q8N5G0 67 aa9.56□□□□□ -0.88
ERCC2-212ENST00000591309 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
ERCC2-212ENST00000591309 USH2AO75445 5202 aa9.54□□□□□ -0.88
ERCC2-212ENST00000591309 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
ERCC2-212ENST00000591309 KRTAP19-1Q8IUB9 90 aa9.44□□□□□ -0.9
ERCC2-212ENST00000591309 SSPOA2VEC9 5147 aa9.4□□□□□ -0.9
ERCC2-212ENST00000591309 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
ERCC2-212ENST00000591309 H0YAA0 97 aa9.34□□□□□ -0.91
ERCC2-212ENST00000591309 CRIPTQ9P021 101 aa9.34□□□□□ -0.91
ERCC2-212ENST00000591309 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
ERCC2-212ENST00000591309 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
ERCC2-212ENST00000591309 ACYP2P14621 99 aa9.28□□□□□ -0.92
ERCC2-212ENST00000591309 ADM2Q7Z4H4 148 aa9.28□□□□□ -0.92
ERCC2-212ENST00000591309 Q5VV11 94 aa9.27□□□□□ -0.93
ERCC2-212ENST00000591309 SNURFQ9Y675 71 aa9.27□□□□□ -0.93
ERCC2-212ENST00000591309 SERP2Q8N6R1 65 aa9.26□□□□□ -0.93
ERCC2-212ENST00000591309 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
ERCC2-212ENST00000591309 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.21□□□□□ -0.94
ERCC2-212ENST00000591309 KRTAP19-8Q3LI54 63 aa9.2□□□□□ -0.94
ERCC2-212ENST00000591309 FCGBPQ9Y6R7 5405 aaPredicted RBP9.18□□□□□ -0.94
ERCC2-212ENST00000591309 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
ERCC2-212ENST00000591309 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
ERCC2-212ENST00000591309 MT1BP07438 61 aa9.14□□□□□ -0.95
ERCC2-212ENST00000591309 SPANXA2-OT1Q8N9U9 137 aa9.11□□□□□ -0.95
ERCC2-212ENST00000591309 A6NN06 94 aa9.07□□□□□ -0.96
ERCC2-212ENST00000591309 R4GN34 69 aa9.07□□□□□ -0.96
ERCC2-212ENST00000591309 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
ERCC2-212ENST00000591309 P0C880 135 aa9.04□□□□□ -0.96
ERCC2-212ENST00000591309 COX7CP15954 63 aa9.04□□□□□ -0.96
ERCC2-212ENST00000591309 M0QZ58 72 aa9□□□□□ -0.97
ERCC2-212ENST00000591309 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
ERCC2-212ENST00000591309 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
ERCC2-212ENST00000591309 KRTAP10-5P60370 271 aa8.92□□□□□ -0.98
ERCC2-212ENST00000591309 ANAPC13Q9BS18 74 aa8.88□□□□□ -0.99
ERCC2-212ENST00000591309 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
ERCC2-212ENST00000591309 COA5Q86WW8 74 aa8.85□□□□□ -0.99
ERCC2-212ENST00000591309 MACF1Q9UPN3 7388 aaKnown RBP8.84□□□□□ -0.99
ERCC2-212ENST00000591309 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
ERCC2-212ENST00000591309 H7BZZ5 65 aa8.8□□□□□ -1
ERCC2-212ENST00000591309 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
ERCC2-212ENST00000591309 SEC61GP60059 68 aa8.73□□□□□ -1.01
ERCC2-212ENST00000591309 KRTAP6-3Q3LI67 103 aa8.71□□□□□ -1.02
ERCC2-212ENST00000591309 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
ERCC2-212ENST00000591309 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
ERCC2-212ENST00000591309 MT1XP80297 61 aa8.64□□□□□ -1.03
ERCC2-212ENST00000591309 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
ERCC2-212ENST00000591309 ATP5EP56381 51 aaPredicted RBP8.53□□□□□ -1.04
ERCC2-212ENST00000591309 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
ERCC2-212ENST00000591309 A0A1B0GU33 70 aa8.47□□□□□ -1.05
ERCC2-212ENST00000591309 A0A1B0GU69 56 aa8.45□□□□□ -1.06
ERCC2-212ENST00000591309 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
ERCC2-212ENST00000591309 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
ERCC2-212ENST00000591309 A0A0D9SG42 100 aa8.4□□□□□ -1.06
ERCC2-212ENST00000591309 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
ERCC2-212ENST00000591309 KRTAP5-9P26371 169 aa8.37□□□□□ -1.07
ERCC2-212ENST00000591309 TMEM258P61165 79 aa8.37□□□□□ -1.07
ERCC2-212ENST00000591309 KRTAP8-1Q8IUC2 63 aa8.32□□□□□ -1.08
ERCC2-212ENST00000591309 PRR15LQ9BU68 103 aa8.32□□□□□ -1.08
ERCC2-212ENST00000591309 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
ERCC2-212ENST00000591309 SMIM26A0A096LP01 95 aa8.27□□□□□ -1.09
ERCC2-212ENST00000591309 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
ERCC2-212ENST00000591309 SPRR2FQ96RM1 72 aa8.26□□□□□ -1.09
ERCC2-212ENST00000591309 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
ERCC2-212ENST00000591309 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
ERCC2-212ENST00000591309 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
ERCC2-212ENST00000591309 KMT2DO14686 5537 aa8.19□□□□□ -1.1
ERCC2-212ENST00000591309 LINC01558Q9Y6Z2 57 aa8.19□□□□□ -1.1
ERCC2-212ENST00000591309 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
ERCC2-212ENST00000591309 NEBP20929 6669 aa8.16□□□□□ -1.1
ERCC2-212ENST00000591309 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
ERCC2-212ENST00000591309 A8MU10 97 aa8.1□□□□□ -1.11
ERCC2-212ENST00000591309 SPRR2EP22531 72 aa8.08□□□□□ -1.12
ERCC2-212ENST00000591309 SPRR2BP35325 72 aa8.08□□□□□ -1.12
ERCC2-212ENST00000591309 SPRR2AP35326 72 aa8.08□□□□□ -1.12
ERCC2-212ENST00000591309 UQCR11O14957 56 aa8□□□□□ -1.13
ERCC2-212ENST00000591309 KRTAP20-1Q3LI63 56 aa7.99□□□□□ -1.13
ERCC2-212ENST00000591309 MDN1Q9NU22 5596 aa7.96□□□□□ -1.13
ERCC2-212ENST00000591309 LCE1AQ5T7P2 110 aa7.94□□□□□ -1.14
ERCC2-212ENST00000591309 V9GYY9 64 aa7.94□□□□□ -1.14
ERCC2-212ENST00000591309 KRTAP2-3P0C7H8 128 aa7.84□□□□□ -1.15
ERCC2-212ENST00000591309 KRTAP2-4Q9BYR9 128 aa7.84□□□□□ -1.15
ERCC2-212ENST00000591309 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
ERCC2-212ENST00000591309 SPRR2DP22532 72 aa7.82□□□□□ -1.16
ERCC2-212ENST00000591309 Q1T7F1 81 aa7.81□□□□□ -1.16
ERCC2-212ENST00000591309 PSPHP1O15172 72 aa7.8□□□□□ -1.16
ERCC2-212ENST00000591309 TNP1P09430 55 aa7.8□□□□□ -1.16
ERCC2-212ENST00000591309 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
ERCC2-212ENST00000591309 PCP4P48539 62 aa7.76□□□□□ -1.17
ERCC2-212ENST00000591309 K7ERS5 55 aa7.74□□□□□ -1.17
ERCC2-212ENST00000591309 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
ERCC2-212ENST00000591309 MT1EP04732 61 aa7.65□□□□□ -1.18
ERCC2-212ENST00000591309 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
ERCC2-212ENST00000591309 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
ERCC2-212ENST00000591309 KRTAP2-2Q9BYT5 123 aa7.61□□□□□ -1.19
ERCC2-212ENST00000591309 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
ERCC2-212ENST00000591309 A6NED7 52 aa7.6□□□□□ -1.19
ERCC2-212ENST00000591309 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
ERCC2-212ENST00000591309 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms