RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SYNE2Q8WXH0 6885 aaKnown RBP8.4□□□□□ -1.06
H3F3B-209ENST00000589949 H0Y9P7 68 aa8.4□□□□□ -1.06
H3F3B-209ENST00000589949 MP68P56378 58 aa8.4□□□□□ -1.06
H3F3B-209ENST00000589949 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
H3F3B-209ENST00000589949 IGKV2-30P06310 120 aa8.39□□□□□ -1.07
H3F3B-209ENST00000589949 H3BPC8 53 aa8.38□□□□□ -1.07
H3F3B-209ENST00000589949 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
H3F3B-209ENST00000589949 C20orf197Q8N268 126 aa8.36□□□□□ -1.07
H3F3B-209ENST00000589949 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
H3F3B-209ENST00000589949 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
H3F3B-209ENST00000589949 KLKP1Q107X0 134 aa8.32□□□□□ -1.08
H3F3B-209ENST00000589949 C1orf64Q8NEQ6 169 aa8.32□□□□□ -1.08
H3F3B-209ENST00000589949 C4orf26Q17RF5 130 aa8.31□□□□□ -1.08
H3F3B-209ENST00000589949 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
H3F3B-209ENST00000589949 SNURFQ9Y675 71 aa8.3□□□□□ -1.08
H3F3B-209ENST00000589949 KRTAP6-3Q3LI67 103 aa8.28□□□□□ -1.08
H3F3B-209ENST00000589949 KRTAP3-1Q9BYR8 98 aa8.25□□□□□ -1.09
H3F3B-209ENST00000589949 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
H3F3B-209ENST00000589949 NDUFC1O43677 76 aa8.23□□□□□ -1.09
H3F3B-209ENST00000589949 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
H3F3B-209ENST00000589949 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
H3F3B-209ENST00000589949 KRTAP4-6Q9BYQ5 205 aa8.2□□□□□ -1.1
H3F3B-209ENST00000589949 H7BZZ5 65 aa8.18□□□□□ -1.1
H3F3B-209ENST00000589949 MT1BP07438 61 aa8.18□□□□□ -1.1
H3F3B-209ENST00000589949 LCA10Q71F78 164 aa8.11□□□□□ -1.11
H3F3B-209ENST00000589949 S4R3F8 94 aa8.11□□□□□ -1.11
H3F3B-209ENST00000589949 TMEM258P61165 79 aa8.09□□□□□ -1.11
H3F3B-209ENST00000589949 KRTAP19-8Q3LI54 63 aa8.09□□□□□ -1.11
H3F3B-209ENST00000589949 SPANXA2-OT1Q8N9U9 137 aa8.09□□□□□ -1.11
H3F3B-209ENST00000589949 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
H3F3B-209ENST00000589949 A6NN06 94 aa8.06□□□□□ -1.12
H3F3B-209ENST00000589949 Q5VV11 94 aa8.05□□□□□ -1.12
H3F3B-209ENST00000589949 CSAG1Q6PB30 78 aa8.05□□□□□ -1.12
H3F3B-209ENST00000589949 ATP5EP56381 51 aaPredicted RBP8.03□□□□□ -1.12
H3F3B-209ENST00000589949 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
H3F3B-209ENST00000589949 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
H3F3B-209ENST00000589949 A8MUN3 132 aa7.94□□□□□ -1.14
H3F3B-209ENST00000589949 NEBP20929 6669 aa7.92□□□□□ -1.14
H3F3B-209ENST00000589949 MUC12Q9UKN1 5478 aa7.92□□□□□ -1.14
H3F3B-209ENST00000589949 ACYP2P14621 99 aa7.91□□□□□ -1.14
H3F3B-209ENST00000589949 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
H3F3B-209ENST00000589949 KRTAP5-9P26371 169 aa7.83□□□□□ -1.16
H3F3B-209ENST00000589949 COA5Q86WW8 74 aa7.82□□□□□ -1.16
H3F3B-209ENST00000589949 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
H3F3B-209ENST00000589949 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
H3F3B-209ENST00000589949 KMT2DO14686 5537 aa7.77□□□□□ -1.16
H3F3B-209ENST00000589949 CHKB-CPT1BH3BT56 60 aa7.76□□□□□ -1.17
H3F3B-209ENST00000589949 KRTAP20-1Q3LI63 56 aa7.75□□□□□ -1.17
H3F3B-209ENST00000589949 MDN1Q9NU22 5596 aa7.71□□□□□ -1.18
H3F3B-209ENST00000589949 H0YAA0 97 aa7.68□□□□□ -1.18
H3F3B-209ENST00000589949 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
H3F3B-209ENST00000589949 SMIM26A0A096LP01 95 aa7.62□□□□□ -1.19
H3F3B-209ENST00000589949 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
H3F3B-209ENST00000589949 MT1XP80297 61 aa7.61□□□□□ -1.19
H3F3B-209ENST00000589949 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
H3F3B-209ENST00000589949 Q1T7F1 81 aa7.51□□□□□ -1.21
H3F3B-209ENST00000589949 V9GYY9 64 aa7.51□□□□□ -1.21
H3F3B-209ENST00000589949 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
H3F3B-209ENST00000589949 KRTAP2-3P0C7H8 128 aa7.49□□□□□ -1.21
H3F3B-209ENST00000589949 KRTAP2-4Q9BYR9 128 aa7.49□□□□□ -1.21
H3F3B-209ENST00000589949 P0C880 135 aa7.48□□□□□ -1.21
H3F3B-209ENST00000589949 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
H3F3B-209ENST00000589949 SPRR2EP22531 72 aa7.47□□□□□ -1.21
H3F3B-209ENST00000589949 SPRR2BP35325 72 aa7.47□□□□□ -1.21
H3F3B-209ENST00000589949 SPRR2AP35326 72 aa7.47□□□□□ -1.21
H3F3B-209ENST00000589949 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
H3F3B-209ENST00000589949 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
H3F3B-209ENST00000589949 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
H3F3B-209ENST00000589949 A0A1B0GU69 56 aa7.41□□□□□ -1.22
H3F3B-209ENST00000589949 SEC61GP60059 68 aa7.41□□□□□ -1.22
H3F3B-209ENST00000589949 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
H3F3B-209ENST00000589949 PRR15LQ9BU68 103 aa7.4□□□□□ -1.22
H3F3B-209ENST00000589949 LCE1AQ5T7P2 110 aa7.39□□□□□ -1.23
H3F3B-209ENST00000589949 R4GN34 69 aa7.39□□□□□ -1.23
H3F3B-209ENST00000589949 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
H3F3B-209ENST00000589949 M0QZ58 72 aa7.36□□□□□ -1.23
H3F3B-209ENST00000589949 PSPHP1O15172 72 aa7.33□□□□□ -1.24
H3F3B-209ENST00000589949 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
H3F3B-209ENST00000589949 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
H3F3B-209ENST00000589949 KRTAP2-2Q9BYT5 123 aa7.24□□□□□ -1.25
H3F3B-209ENST00000589949 KRTAP2-1Q9BYU5 128 aa7.24□□□□□ -1.25
H3F3B-209ENST00000589949 A0A1B0GU33 70 aa7.23□□□□□ -1.25
H3F3B-209ENST00000589949 SPRR2DP22532 72 aa7.21□□□□□ -1.26
H3F3B-209ENST00000589949 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
H3F3B-209ENST00000589949 UQCR11O14957 56 aa7.17□□□□□ -1.26
H3F3B-209ENST00000589949 A6NED7 52 aa7.13□□□□□ -1.27
H3F3B-209ENST00000589949 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
H3F3B-209ENST00000589949 MIR22HGQ0VDD5 57 aa7.07□□□□□ -1.28
H3F3B-209ENST00000589949 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
H3F3B-209ENST00000589949 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
H3F3B-209ENST00000589949 KRTAP4-12Q9BQ66 201 aa7.04□□□□□ -1.28
H3F3B-209ENST00000589949 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
H3F3B-209ENST00000589949 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
H3F3B-209ENST00000589949 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
H3F3B-209ENST00000589949 A8MU10 97 aa6.95□□□□□ -1.3
H3F3B-209ENST00000589949 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
H3F3B-209ENST00000589949 A0A0D9SG42 100 aa6.93□□□□□ -1.3
H3F3B-209ENST00000589949 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
H3F3B-209ENST00000589949 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
H3F3B-209ENST00000589949 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms