RNA–Protein interactions for RNA: ENST00000589321.5

CACTIN-207, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 1,708 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-207ENST00000589321 PRO0628Q9UI54 55 aa10.87□□□□□ -0.67
CACTIN-207ENST00000589321 KRTAP3-1Q9BYR8 98 aa10.84□□□□□ -0.67
CACTIN-207ENST00000589321 COX6B2Q6YFQ2 88 aa10.82□□□□□ -0.68
CACTIN-207ENST00000589321 LINC01558Q9Y6Z2 57 aa10.82□□□□□ -0.68
CACTIN-207ENST00000589321 PSPHP1O15172 72 aa10.81□□□□□ -0.68
CACTIN-207ENST00000589321 PRR15LQ9BU68 103 aa10.76□□□□□ -0.69
CACTIN-207ENST00000589321 Q5VV11 94 aa10.72□□□□□ -0.69
CACTIN-207ENST00000589321 LCE2AQ5TA79 106 aaPredicted RBP10.71□□□□□ -0.69
CACTIN-207ENST00000589321 SPTSSBQ8NFR3 76 aa10.67□□□□□ -0.7
CACTIN-207ENST00000589321 BRK1Q8WUW1 75 aa10.67□□□□□ -0.7
CACTIN-207ENST00000589321 KRTAP19-2Q3LHN2 52 aa10.66□□□□□ -0.7
CACTIN-207ENST00000589321 LCE2CQ5TA81 110 aa10.6□□□□□ -0.71
CACTIN-207ENST00000589321 A0A1B0GU69 56 aa10.58□□□□□ -0.72
CACTIN-207ENST00000589321 RBM12B-AS1Q9P1G2 102 aa10.51□□□□□ -0.73
CACTIN-207ENST00000589321 A6NED7 52 aa10.48□□□□□ -0.73
CACTIN-207ENST00000589321 H1FX-AS1Q4G0G2 97 aa10.48□□□□□ -0.73
CACTIN-207ENST00000589321 KRTAP9-2Q9BYQ4 174 aa10.47□□□□□ -0.73
CACTIN-207ENST00000589321 S4R3F8 94 aa10.46□□□□□ -0.74
CACTIN-207ENST00000589321 LCA10Q71F78 164 aa10.45□□□□□ -0.74
CACTIN-207ENST00000589321 SEC61GP60059 68 aa10.44□□□□□ -0.74
CACTIN-207ENST00000589321 KRTAP3-3Q9BYR6 98 aa10.44□□□□□ -0.74
CACTIN-207ENST00000589321 MT1HP80294 61 aa10.41□□□□□ -0.74
CACTIN-207ENST00000589321 CDC42SE1Q9NRR8 79 aa10.34□□□□□ -0.75
CACTIN-207ENST00000589321 FLGP20930 4061 aaPredicted RBP10.33□□□□□ -0.76
CACTIN-207ENST00000589321 UQCR11O14957 56 aa10.3□□□□□ -0.76
CACTIN-207ENST00000589321 A8MU10 97 aa10.3□□□□□ -0.76
CACTIN-207ENST00000589321 SPATA8Q6RVD6 105 aa10.22□□□□□ -0.77
CACTIN-207ENST00000589321 M0R2T5 61 aa10.2□□□□□ -0.78
CACTIN-207ENST00000589321 MIR22HGQ0VDD5 57 aa10.2□□□□□ -0.78
CACTIN-207ENST00000589321 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
CACTIN-207ENST00000589321 A0A1B0GU33 70 aa10.19□□□□□ -0.78
CACTIN-207ENST00000589321 PMAIP1Q13794 54 aa10.16□□□□□ -0.78
CACTIN-207ENST00000589321 KRTAP10-6P60371 365 aaPredicted RBP10.14□□□□□ -0.79
CACTIN-207ENST00000589321 LCE2DQ5TA82 110 aaPredicted RBP10.13□□□□□ -0.79
CACTIN-207ENST00000589321 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
CACTIN-207ENST00000589321 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
CACTIN-207ENST00000589321 KRTAP9-6A0A140TA67 174 aa10.12□□□□□ -0.79
CACTIN-207ENST00000589321 H0YAA0 97 aa10.06□□□□□ -0.8
CACTIN-207ENST00000589321 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
CACTIN-207ENST00000589321 P0C880 135 aa10□□□□□ -0.81
CACTIN-207ENST00000589321 FSIP2Q5CZC0 6907 aa9.99□□□□□ -0.81
CACTIN-207ENST00000589321 A6NN06 94 aa9.98□□□□□ -0.81
CACTIN-207ENST00000589321 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.81
CACTIN-207ENST00000589321 KRTAP9-8Q9BYQ0 159 aa9.94□□□□□ -0.82
CACTIN-207ENST00000589321 CRCT1Q9UGL9 99 aa9.9□□□□□ -0.82
CACTIN-207ENST00000589321 KRTAP13-4Q3LI77 160 aa9.88□□□□□ -0.83
CACTIN-207ENST00000589321 MT2AP02795 61 aa9.83□□□□□ -0.84
CACTIN-207ENST00000589321 M0QZ58 72 aa9.79□□□□□ -0.84
CACTIN-207ENST00000589321 MT1FP04733 61 aa9.76□□□□□ -0.85
CACTIN-207ENST00000589321 A0A0D9SG42 100 aa9.71□□□□□ -0.85
CACTIN-207ENST00000589321 K7ERS5 55 aa9.7□□□□□ -0.86
CACTIN-207ENST00000589321 KRTAP10-10P60014 251 aa9.69□□□□□ -0.86
CACTIN-207ENST00000589321 R4GN34 69 aa9.65□□□□□ -0.86
CACTIN-207ENST00000589321 KRTAP9-3Q9BYQ3 159 aa9.61□□□□□ -0.87
CACTIN-207ENST00000589321 USH2AO75445 5202 aa9.55□□□□□ -0.88
CACTIN-207ENST00000589321 KRTAP12-1P59990 96 aa9.53□□□□□ -0.88
CACTIN-207ENST00000589321 KRTAP12-2P59991 146 aa9.51□□□□□ -0.89
CACTIN-207ENST00000589321 CRIPTQ9P021 101 aa9.5□□□□□ -0.89
CACTIN-207ENST00000589321 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
CACTIN-207ENST00000589321 SSPOA2VEC9 5147 aa9.48□□□□□ -0.89
CACTIN-207ENST00000589321 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
CACTIN-207ENST00000589321 LCE2BO14633 110 aa9.46□□□□□ -0.89
CACTIN-207ENST00000589321 PRAC1Q96KF2 57 aa9.35□□□□□ -0.91
CACTIN-207ENST00000589321 ROMO1P60602 79 aa9.34□□□□□ -0.91
CACTIN-207ENST00000589321 KRTAP19-1Q8IUB9 90 aa9.33□□□□□ -0.92
CACTIN-207ENST00000589321 SPRR2GQ9BYE4 73 aa9.27□□□□□ -0.93
CACTIN-207ENST00000589321 FCGBPQ9Y6R7 5405 aaPredicted RBP9.24□□□□□ -0.93
CACTIN-207ENST00000589321 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.21□□□□□ -0.94
CACTIN-207ENST00000589321 KRTAP19-8Q3LI54 63 aa9.14□□□□□ -0.95
CACTIN-207ENST00000589321 KRTAP9-7A8MTY7 169 aa9.11□□□□□ -0.95
CACTIN-207ENST00000589321 MT1BP07438 61 aa9.08□□□□□ -0.96
CACTIN-207ENST00000589321 CAMK2N1Q7Z7J9 78 aa9.07□□□□□ -0.96
CACTIN-207ENST00000589321 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
CACTIN-207ENST00000589321 KRTAP19-6Q3LI70 58 aa9.05□□□□□ -0.96
CACTIN-207ENST00000589321 C10orf95Q9H7T3 257 aa9□□□□□ -0.97
CACTIN-207ENST00000589321 MACF1Q9UPN3 7388 aaKnown RBP8.98□□□□□ -0.97
CACTIN-207ENST00000589321 PLAC4Q8WY50 150 aa8.97□□□□□ -0.97
CACTIN-207ENST00000589321 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
CACTIN-207ENST00000589321 KRTAP10-5P60370 271 aa8.77□□□□□ -1.01
CACTIN-207ENST00000589321 TNP1P09430 55 aa8.68□□□□□ -1.02
CACTIN-207ENST00000589321 MT1XP80297 61 aa8.63□□□□□ -1.03
CACTIN-207ENST00000589321 KRTAP6-3Q3LI67 103 aa8.6□□□□□ -1.03
CACTIN-207ENST00000589321 PP632Q6XCG6 107 aa8.57□□□□□ -1.04
CACTIN-207ENST00000589321 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
CACTIN-207ENST00000589321 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
CACTIN-207ENST00000589321 MUC12Q9UKN1 5478 aa8.37□□□□□ -1.07
CACTIN-207ENST00000589321 NEBP20929 6669 aa8.34□□□□□ -1.07
CACTIN-207ENST00000589321 LCE3AQ5TA76 89 aa8.26□□□□□ -1.09
CACTIN-207ENST00000589321 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
CACTIN-207ENST00000589321 KRTAP10-12P60413 245 aa8.21□□□□□ -1.09
CACTIN-207ENST00000589321 KRTAP15-1Q3LI76 137 aa8.19□□□□□ -1.1
CACTIN-207ENST00000589321 KMT2DO14686 5537 aa8.19□□□□□ -1.1
CACTIN-207ENST00000589321 KRTAP5-9P26371 169 aa8.18□□□□□ -1.1
CACTIN-207ENST00000589321 H3BS24 57 aa8.16□□□□□ -1.1
CACTIN-207ENST00000589321 KRTAP8-1Q8IUC2 63 aa8.12□□□□□ -1.11
CACTIN-207ENST00000589321 MDN1Q9NU22 5596 aa8.12□□□□□ -1.11
CACTIN-207ENST00000589321 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
CACTIN-207ENST00000589321 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
CACTIN-207ENST00000589321 KRTAP20-1Q3LI63 56 aa7.99□□□□□ -1.13
CACTIN-207ENST00000589321 SPRR2FQ96RM1 72 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms