RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ACYP2P14621 99 aa5.83□□□□□ -1.48
DNMT1-218ENST00000589294 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
DNMT1-218ENST00000589294 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
DNMT1-218ENST00000589294 CCDC179H3BU77 68 aa5.79□□□□□ -1.48
DNMT1-218ENST00000589294 H7BZZ5 65 aa5.79□□□□□ -1.48
DNMT1-218ENST00000589294 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
DNMT1-218ENST00000589294 MT2AP02795 61 aa5.75□□□□□ -1.49
DNMT1-218ENST00000589294 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
DNMT1-218ENST00000589294 CHKB-CPT1BH3BT56 60 aa5.7□□□□□ -1.5
DNMT1-218ENST00000589294 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
DNMT1-218ENST00000589294 MT1FP04733 61 aa5.69□□□□□ -1.5
DNMT1-218ENST00000589294 H0YAA0 97 aa5.68□□□□□ -1.5
DNMT1-218ENST00000589294 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
DNMT1-218ENST00000589294 ATP5EP56381 51 aaPredicted RBP5.65□□□□□ -1.5
DNMT1-218ENST00000589294 COA5Q86WW8 74 aa5.64□□□□□ -1.51
DNMT1-218ENST00000589294 TMEM258P61165 79 aa5.62□□□□□ -1.51
DNMT1-218ENST00000589294 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
DNMT1-218ENST00000589294 ADM2Q7Z4H4 148 aa5.59□□□□□ -1.51
DNMT1-218ENST00000589294 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
DNMT1-218ENST00000589294 PCP4P48539 62 aa5.57□□□□□ -1.52
DNMT1-218ENST00000589294 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
DNMT1-218ENST00000589294 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
DNMT1-218ENST00000589294 LCE2BO14633 110 aa5.5□□□□□ -1.53
DNMT1-218ENST00000589294 P0C880 135 aa5.5□□□□□ -1.53
DNMT1-218ENST00000589294 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
DNMT1-218ENST00000589294 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
DNMT1-218ENST00000589294 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
DNMT1-218ENST00000589294 USH2AO75445 5202 aa5.47□□□□□ -1.53
DNMT1-218ENST00000589294 SEC61GP60059 68 aa5.46□□□□□ -1.54
DNMT1-218ENST00000589294 SERP1Q9Y6X1 66 aa5.45□□□□□ -1.54
DNMT1-218ENST00000589294 R4GN34 69 aa5.44□□□□□ -1.54
DNMT1-218ENST00000589294 KRTAP19-8Q3LI54 63 aa5.4□□□□□ -1.54
DNMT1-218ENST00000589294 M0QZ58 72 aa5.39□□□□□ -1.55
DNMT1-218ENST00000589294 A0A1B0GU69 56 aa5.37□□□□□ -1.55
DNMT1-218ENST00000589294 Q5VV11 94 aa5.37□□□□□ -1.55
DNMT1-218ENST00000589294 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
DNMT1-218ENST00000589294 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
DNMT1-218ENST00000589294 A0A1B0GU33 70 aa5.33□□□□□ -1.56
DNMT1-218ENST00000589294 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
DNMT1-218ENST00000589294 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
DNMT1-218ENST00000589294 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
DNMT1-218ENST00000589294 MT1BP07438 61 aa5.32□□□□□ -1.56
DNMT1-218ENST00000589294 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
DNMT1-218ENST00000589294 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
DNMT1-218ENST00000589294 V9GYY9 64 aa5.28□□□□□ -1.56
DNMT1-218ENST00000589294 SMIM26A0A096LP01 95 aa5.27□□□□□ -1.57
DNMT1-218ENST00000589294 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
DNMT1-218ENST00000589294 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
DNMT1-218ENST00000589294 PLAC4Q8WY50 150 aa5.26□□□□□ -1.57
DNMT1-218ENST00000589294 Q1T7F1 81 aa5.25□□□□□ -1.57
DNMT1-218ENST00000589294 A6NN06 94 aa5.24□□□□□ -1.57
DNMT1-218ENST00000589294 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.58
DNMT1-218ENST00000589294 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
DNMT1-218ENST00000589294 UQCR11O14957 56 aa5.16□□□□□ -1.58
DNMT1-218ENST00000589294 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
DNMT1-218ENST00000589294 A0A0D9SG42 100 aa5.14□□□□□ -1.59
DNMT1-218ENST00000589294 PSPHP1O15172 72 aa5.14□□□□□ -1.59
DNMT1-218ENST00000589294 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
DNMT1-218ENST00000589294 A8MU10 97 aa5.08□□□□□ -1.6
DNMT1-218ENST00000589294 MT1XP80297 61 aa5.08□□□□□ -1.6
DNMT1-218ENST00000589294 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
DNMT1-218ENST00000589294 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
DNMT1-218ENST00000589294 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
DNMT1-218ENST00000589294 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
DNMT1-218ENST00000589294 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
DNMT1-218ENST00000589294 A6NED7 52 aa5□□□□□ -1.61
DNMT1-218ENST00000589294 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
DNMT1-218ENST00000589294 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-218ENST00000589294 K7ERS5 55 aa4.92□□□□□ -1.62
DNMT1-218ENST00000589294 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
DNMT1-218ENST00000589294 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
DNMT1-218ENST00000589294 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
DNMT1-218ENST00000589294 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-218ENST00000589294 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
DNMT1-218ENST00000589294 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
DNMT1-218ENST00000589294 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
DNMT1-218ENST00000589294 KMT2DO14686 5537 aa4.77□□□□□ -1.65
DNMT1-218ENST00000589294 TNP1P09430 55 aa4.76□□□□□ -1.65
DNMT1-218ENST00000589294 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
DNMT1-218ENST00000589294 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
DNMT1-218ENST00000589294 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
DNMT1-218ENST00000589294 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
DNMT1-218ENST00000589294 KRTAP25-1Q3LHN0 102 aa4.67□□□□□ -1.66
DNMT1-218ENST00000589294 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
DNMT1-218ENST00000589294 ROMO1P60602 79 aa4.64□□□□□ -1.67
DNMT1-218ENST00000589294 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
DNMT1-218ENST00000589294 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.68
DNMT1-218ENST00000589294 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
DNMT1-218ENST00000589294 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
DNMT1-218ENST00000589294 NEBP20929 6669 aa4.56□□□□□ -1.68
DNMT1-218ENST00000589294 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
DNMT1-218ENST00000589294 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
DNMT1-218ENST00000589294 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
DNMT1-218ENST00000589294 MT1EP04732 61 aa4.48□□□□□ -1.69
DNMT1-218ENST00000589294 SPRR2EP22531 72 aa4.47□□□□□ -1.69
DNMT1-218ENST00000589294 SPRR2BP35325 72 aa4.47□□□□□ -1.69
DNMT1-218ENST00000589294 SPRR2AP35326 72 aa4.47□□□□□ -1.69
DNMT1-218ENST00000589294 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
DNMT1-218ENST00000589294 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
DNMT1-218ENST00000589294 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms