RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 USH2AO75445 5202 aa6.77□□□□□ -1.33
ERCC1-208ENST00000589165 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
ERCC1-208ENST00000589165 SPANXA2-OT1Q8N9U9 137 aa6.75□□□□□ -1.33
ERCC1-208ENST00000589165 C7orf65Q6ZTY9 151 aa6.74□□□□□ -1.33
ERCC1-208ENST00000589165 IGKV2D-30A0A075B6S6 120 aa6.73□□□□□ -1.33
ERCC1-208ENST00000589165 MT1FP04733 61 aa6.73□□□□□ -1.33
ERCC1-208ENST00000589165 IGKV2-30P06310 120 aa6.73□□□□□ -1.33
ERCC1-208ENST00000589165 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
ERCC1-208ENST00000589165 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.34
ERCC1-208ENST00000589165 H1FX-AS1Q4G0G2 97 aa6.7□□□□□ -1.34
ERCC1-208ENST00000589165 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
ERCC1-208ENST00000589165 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
ERCC1-208ENST00000589165 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
ERCC1-208ENST00000589165 C4orf26Q17RF5 130 aa6.61□□□□□ -1.35
ERCC1-208ENST00000589165 LCE2BO14633 110 aa6.6□□□□□ -1.35
ERCC1-208ENST00000589165 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
ERCC1-208ENST00000589165 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
ERCC1-208ENST00000589165 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
ERCC1-208ENST00000589165 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
ERCC1-208ENST00000589165 ACYP2P14621 99 aa6.51□□□□□ -1.37
ERCC1-208ENST00000589165 COA5Q86WW8 74 aa6.51□□□□□ -1.37
ERCC1-208ENST00000589165 A8MUN3 132 aa6.47□□□□□ -1.37
ERCC1-208ENST00000589165 S4R3F8 94 aa6.47□□□□□ -1.37
ERCC1-208ENST00000589165 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
ERCC1-208ENST00000589165 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
ERCC1-208ENST00000589165 LCA10Q71F78 164 aa6.42□□□□□ -1.38
ERCC1-208ENST00000589165 Q1T7F1 81 aa6.41□□□□□ -1.38
ERCC1-208ENST00000589165 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.4□□□□□ -1.39
ERCC1-208ENST00000589165 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
ERCC1-208ENST00000589165 V9GYY9 64 aa6.38□□□□□ -1.39
ERCC1-208ENST00000589165 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
ERCC1-208ENST00000589165 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
ERCC1-208ENST00000589165 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
ERCC1-208ENST00000589165 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
ERCC1-208ENST00000589165 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
ERCC1-208ENST00000589165 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
ERCC1-208ENST00000589165 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
ERCC1-208ENST00000589165 SPTSSBQ8NFR3 76 aa6.26□□□□□ -1.41
ERCC1-208ENST00000589165 PSPHP1O15172 72 aa6.22□□□□□ -1.41
ERCC1-208ENST00000589165 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
ERCC1-208ENST00000589165 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
ERCC1-208ENST00000589165 Q5VV11 94 aa6.21□□□□□ -1.42
ERCC1-208ENST00000589165 CRIPTQ9P021 101 aa6.21□□□□□ -1.42
ERCC1-208ENST00000589165 H0YAA0 97 aa6.2□□□□□ -1.42
ERCC1-208ENST00000589165 MT1BP07438 61 aa6.19□□□□□ -1.42
ERCC1-208ENST00000589165 A0A1B0GU69 56 aa6.15□□□□□ -1.43
ERCC1-208ENST00000589165 A6NN06 94 aa6.09□□□□□ -1.43
ERCC1-208ENST00000589165 SEC61GP60059 68 aa6.09□□□□□ -1.43
ERCC1-208ENST00000589165 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.44
ERCC1-208ENST00000589165 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
ERCC1-208ENST00000589165 A6NED7 52 aa6.04□□□□□ -1.44
ERCC1-208ENST00000589165 BRK1Q8WUW1 75 aa6.02□□□□□ -1.44
ERCC1-208ENST00000589165 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
ERCC1-208ENST00000589165 UQCR11O14957 56 aa5.99□□□□□ -1.45
ERCC1-208ENST00000589165 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
ERCC1-208ENST00000589165 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
ERCC1-208ENST00000589165 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
ERCC1-208ENST00000589165 P0C880 135 aa5.96□□□□□ -1.46
ERCC1-208ENST00000589165 A0A1B0GU33 70 aa5.95□□□□□ -1.46
ERCC1-208ENST00000589165 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
ERCC1-208ENST00000589165 R4GN34 69 aa5.94□□□□□ -1.46
ERCC1-208ENST00000589165 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
ERCC1-208ENST00000589165 A8MU10 97 aa5.91□□□□□ -1.46
ERCC1-208ENST00000589165 NEBP20929 6669 aa5.9□□□□□ -1.46
ERCC1-208ENST00000589165 M0QZ58 72 aa5.88□□□□□ -1.47
ERCC1-208ENST00000589165 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
ERCC1-208ENST00000589165 MUC12Q9UKN1 5478 aa5.86□□□□□ -1.47
ERCC1-208ENST00000589165 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
ERCC1-208ENST00000589165 MT1XP80297 61 aa5.83□□□□□ -1.48
ERCC1-208ENST00000589165 KMT2DO14686 5537 aa5.8□□□□□ -1.48
ERCC1-208ENST00000589165 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
ERCC1-208ENST00000589165 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
ERCC1-208ENST00000589165 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
ERCC1-208ENST00000589165 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
ERCC1-208ENST00000589165 PMAIP1Q13794 54 aa5.71□□□□□ -1.49
ERCC1-208ENST00000589165 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
ERCC1-208ENST00000589165 A0A0D9SG42 100 aa5.65□□□□□ -1.5
ERCC1-208ENST00000589165 K7ERS5 55 aa5.64□□□□□ -1.51
ERCC1-208ENST00000589165 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
ERCC1-208ENST00000589165 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
ERCC1-208ENST00000589165 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
ERCC1-208ENST00000589165 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
ERCC1-208ENST00000589165 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
ERCC1-208ENST00000589165 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
ERCC1-208ENST00000589165 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
ERCC1-208ENST00000589165 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
ERCC1-208ENST00000589165 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
ERCC1-208ENST00000589165 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
ERCC1-208ENST00000589165 SPRR2EP22531 72 aa5.49□□□□□ -1.53
ERCC1-208ENST00000589165 SPRR2BP35325 72 aa5.49□□□□□ -1.53
ERCC1-208ENST00000589165 SPRR2AP35326 72 aa5.49□□□□□ -1.53
ERCC1-208ENST00000589165 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.53
ERCC1-208ENST00000589165 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
ERCC1-208ENST00000589165 ROMO1P60602 79 aa5.43□□□□□ -1.54
ERCC1-208ENST00000589165 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
ERCC1-208ENST00000589165 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
ERCC1-208ENST00000589165 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
ERCC1-208ENST00000589165 SPRR2DP22532 72 aa5.31□□□□□ -1.56
ERCC1-208ENST00000589165 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
ERCC1-208ENST00000589165 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms