RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
APOC1-204ENST00000589078 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
APOC1-204ENST00000589078 H3BPC8 53 aa4.6□□□□□ -1.67
APOC1-204ENST00000589078 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
APOC1-204ENST00000589078 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
APOC1-204ENST00000589078 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
APOC1-204ENST00000589078 NEBP20929 6669 aa4.57□□□□□ -1.68
APOC1-204ENST00000589078 A8MUN3 132 aa4.57□□□□□ -1.68
APOC1-204ENST00000589078 LCA10Q71F78 164 aa4.57□□□□□ -1.68
APOC1-204ENST00000589078 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
APOC1-204ENST00000589078 FAM236AA0A1B0GUQ0 79 aa4.54□□□□□ -1.68
APOC1-204ENST00000589078 FAM236BA0A1B0GV22 79 aa4.54□□□□□ -1.68
APOC1-204ENST00000589078 KLKP1Q107X0 134 aa4.53□□□□□ -1.68
APOC1-204ENST00000589078 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
APOC1-204ENST00000589078 NDUFC1O43677 76 aa4.52□□□□□ -1.69
APOC1-204ENST00000589078 KRTAP3-3Q9BYR6 98 aa4.48□□□□□ -1.69
APOC1-204ENST00000589078 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
APOC1-204ENST00000589078 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
APOC1-204ENST00000589078 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
APOC1-204ENST00000589078 SERP2Q8N6R1 65 aa4.42□□□□□ -1.7
APOC1-204ENST00000589078 H0YAA0 97 aa4.41□□□□□ -1.7
APOC1-204ENST00000589078 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
APOC1-204ENST00000589078 ACYP2P14621 99 aa4.4□□□□□ -1.71
APOC1-204ENST00000589078 SNURFQ9Y675 71 aa4.39□□□□□ -1.71
APOC1-204ENST00000589078 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
APOC1-204ENST00000589078 COX7CP15954 63 aa4.37□□□□□ -1.71
APOC1-204ENST00000589078 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
APOC1-204ENST00000589078 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
APOC1-204ENST00000589078 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
APOC1-204ENST00000589078 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
APOC1-204ENST00000589078 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
APOC1-204ENST00000589078 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
APOC1-204ENST00000589078 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
APOC1-204ENST00000589078 Q5VV11 94 aa4.34□□□□□ -1.71
APOC1-204ENST00000589078 SPANXA2-OT1Q8N9U9 137 aa4.34□□□□□ -1.71
APOC1-204ENST00000589078 MDN1Q9NU22 5596 aa4.32□□□□□ -1.72
APOC1-204ENST00000589078 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
APOC1-204ENST00000589078 KMT2DO14686 5537 aa4.29□□□□□ -1.72
APOC1-204ENST00000589078 PCP4P48539 62 aa4.28□□□□□ -1.72
APOC1-204ENST00000589078 R4GN34 69 aa4.27□□□□□ -1.73
APOC1-204ENST00000589078 H7BZZ5 65 aa4.26□□□□□ -1.73
APOC1-204ENST00000589078 MT1BP07438 61 aa4.26□□□□□ -1.73
APOC1-204ENST00000589078 A6NN06 94 aa4.24□□□□□ -1.73
APOC1-204ENST00000589078 P0C880 135 aa4.24□□□□□ -1.73
APOC1-204ENST00000589078 M0QZ58 72 aa4.23□□□□□ -1.73
APOC1-204ENST00000589078 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
APOC1-204ENST00000589078 KRTAP3-2Q9BYR7 98 aa4.22□□□□□ -1.73
APOC1-204ENST00000589078 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
APOC1-204ENST00000589078 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
APOC1-204ENST00000589078 COA5Q86WW8 74 aa4.2□□□□□ -1.74
APOC1-204ENST00000589078 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
APOC1-204ENST00000589078 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
APOC1-204ENST00000589078 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
APOC1-204ENST00000589078 SEC61GP60059 68 aa4.15□□□□□ -1.75
APOC1-204ENST00000589078 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
APOC1-204ENST00000589078 TMEM258P61165 79 aa4.13□□□□□ -1.75
APOC1-204ENST00000589078 SERP1Q9Y6X1 66 aa4.13□□□□□ -1.75
APOC1-204ENST00000589078 ATP5EP56381 51 aaPredicted RBP4.11□□□□□ -1.75
APOC1-204ENST00000589078 SPRR2EP22531 72 aa4.07□□□□□ -1.76
APOC1-204ENST00000589078 SPRR2BP35325 72 aa4.07□□□□□ -1.76
APOC1-204ENST00000589078 SPRR2AP35326 72 aa4.07□□□□□ -1.76
APOC1-204ENST00000589078 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
APOC1-204ENST00000589078 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
APOC1-204ENST00000589078 MT1XP80297 61 aa4.04□□□□□ -1.76
APOC1-204ENST00000589078 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
APOC1-204ENST00000589078 A0A1B0GU33 70 aa4.01□□□□□ -1.77
APOC1-204ENST00000589078 A0A1B0GU69 56 aa4.01□□□□□ -1.77
APOC1-204ENST00000589078 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
APOC1-204ENST00000589078 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
APOC1-204ENST00000589078 PRR15LQ9BU68 103 aa3.98□□□□□ -1.77
APOC1-204ENST00000589078 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
APOC1-204ENST00000589078 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
APOC1-204ENST00000589078 A0A0D9SG42 100 aa3.95□□□□□ -1.78
APOC1-204ENST00000589078 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
APOC1-204ENST00000589078 SPRR2DP22532 72 aa3.94□□□□□ -1.78
APOC1-204ENST00000589078 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
APOC1-204ENST00000589078 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
APOC1-204ENST00000589078 SMIM26A0A096LP01 95 aa3.93□□□□□ -1.78
APOC1-204ENST00000589078 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
APOC1-204ENST00000589078 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
APOC1-204ENST00000589078 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
APOC1-204ENST00000589078 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
APOC1-204ENST00000589078 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
APOC1-204ENST00000589078 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
APOC1-204ENST00000589078 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
APOC1-204ENST00000589078 Q1T7F1 81 aa3.84□□□□□ -1.79
APOC1-204ENST00000589078 A8MU10 97 aa3.82□□□□□ -1.8
APOC1-204ENST00000589078 V9GYY9 64 aa3.82□□□□□ -1.8
APOC1-204ENST00000589078 UQCR11O14957 56 aa3.81□□□□□ -1.8
APOC1-204ENST00000589078 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
APOC1-204ENST00000589078 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
APOC1-204ENST00000589078 PSPHP1O15172 72 aa3.76□□□□□ -1.81
APOC1-204ENST00000589078 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
APOC1-204ENST00000589078 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
APOC1-204ENST00000589078 K7ERS5 55 aa3.7□□□□□ -1.82
APOC1-204ENST00000589078 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
APOC1-204ENST00000589078 TNP1P09430 55 aa3.68□□□□□ -1.82
APOC1-204ENST00000589078 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
APOC1-204ENST00000589078 A6NED7 52 aa3.64□□□□□ -1.83
APOC1-204ENST00000589078 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms