RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 FAM236DA0A1B0GTK5 79 aa5.84□□□□□ -1.47
RFX1-204ENST00000588885 FAM236CP0DP71 79 aa5.84□□□□□ -1.47
RFX1-204ENST00000588885 COX7CP15954 63 aa5.81□□□□□ -1.48
RFX1-204ENST00000588885 MP68P56378 58 aa5.81□□□□□ -1.48
RFX1-204ENST00000588885 IGKV2D-30A0A075B6S6 120 aa5.8□□□□□ -1.48
RFX1-204ENST00000588885 IGKV2-30P06310 120 aa5.8□□□□□ -1.48
RFX1-204ENST00000588885 HRES1P13985 223 aa5.8□□□□□ -1.48
RFX1-204ENST00000588885 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
RFX1-204ENST00000588885 LINC00208Q96KT6 92 aa5.79□□□□□ -1.48
RFX1-204ENST00000588885 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
RFX1-204ENST00000588885 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
RFX1-204ENST00000588885 LOC101927531A0A1B0GV80 90 aa5.77□□□□□ -1.49
RFX1-204ENST00000588885 C20orf197Q8N268 126 aa5.77□□□□□ -1.49
RFX1-204ENST00000588885 C1orf64Q8NEQ6 169 aa5.77□□□□□ -1.49
RFX1-204ENST00000588885 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
RFX1-204ENST00000588885 H3BPC8 53 aa5.76□□□□□ -1.49
RFX1-204ENST00000588885 SPINK7P58062 85 aa5.76□□□□□ -1.49
RFX1-204ENST00000588885 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
RFX1-204ENST00000588885 USH2AO75445 5202 aa5.75□□□□□ -1.49
RFX1-204ENST00000588885 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
RFX1-204ENST00000588885 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
RFX1-204ENST00000588885 KLKP1Q107X0 134 aa5.72□□□□□ -1.49
RFX1-204ENST00000588885 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
RFX1-204ENST00000588885 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
RFX1-204ENST00000588885 MT2AP02795 61 aa5.69□□□□□ -1.5
RFX1-204ENST00000588885 PCP4P48539 62 aa5.68□□□□□ -1.5
RFX1-204ENST00000588885 MT1FP04733 61 aa5.65□□□□□ -1.5
RFX1-204ENST00000588885 KRTAP10-10P60014 251 aa5.65□□□□□ -1.5
RFX1-204ENST00000588885 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
RFX1-204ENST00000588885 H7BZZ5 65 aa5.63□□□□□ -1.51
RFX1-204ENST00000588885 NDUFC1O43677 76 aa5.61□□□□□ -1.51
RFX1-204ENST00000588885 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
RFX1-204ENST00000588885 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
RFX1-204ENST00000588885 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
RFX1-204ENST00000588885 DMAC1Q96GE9 116 aa5.55□□□□□ -1.52
RFX1-204ENST00000588885 H1FX-AS1Q4G0G2 97 aa5.53□□□□□ -1.52
RFX1-204ENST00000588885 TMEM258P61165 79 aa5.52□□□□□ -1.53
RFX1-204ENST00000588885 A8MUN3 132 aa5.51□□□□□ -1.53
RFX1-204ENST00000588885 H3BS24 57 aa5.51□□□□□ -1.53
RFX1-204ENST00000588885 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
RFX1-204ENST00000588885 S4R3F8 94 aa5.45□□□□□ -1.54
RFX1-204ENST00000588885 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
RFX1-204ENST00000588885 ACYP2P14621 99 aa5.44□□□□□ -1.54
RFX1-204ENST00000588885 COA5Q86WW8 74 aa5.43□□□□□ -1.54
RFX1-204ENST00000588885 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
RFX1-204ENST00000588885 LCA10Q71F78 164 aa5.42□□□□□ -1.54
RFX1-204ENST00000588885 CHKB-CPT1BH3BT56 60 aa5.39□□□□□ -1.55
RFX1-204ENST00000588885 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
RFX1-204ENST00000588885 SERP1Q9Y6X1 66 aa5.34□□□□□ -1.55
RFX1-204ENST00000588885 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
RFX1-204ENST00000588885 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
RFX1-204ENST00000588885 SPTSSBQ8NFR3 76 aa5.28□□□□□ -1.56
RFX1-204ENST00000588885 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
RFX1-204ENST00000588885 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
RFX1-204ENST00000588885 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
RFX1-204ENST00000588885 A6NN06 94 aa5.17□□□□□ -1.58
RFX1-204ENST00000588885 H0YAA0 97 aa5.17□□□□□ -1.58
RFX1-204ENST00000588885 MT1BP07438 61 aa5.17□□□□□ -1.58
RFX1-204ENST00000588885 Q5VV11 94 aa5.17□□□□□ -1.58
RFX1-204ENST00000588885 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
RFX1-204ENST00000588885 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
RFX1-204ENST00000588885 P0C880 135 aa5.14□□□□□ -1.59
RFX1-204ENST00000588885 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
RFX1-204ENST00000588885 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
RFX1-204ENST00000588885 A0A1B0GU69 56 aa5.11□□□□□ -1.59
RFX1-204ENST00000588885 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
RFX1-204ENST00000588885 SEC61GP60059 68 aa5.09□□□□□ -1.59
RFX1-204ENST00000588885 Q1T7F1 81 aa5.09□□□□□ -1.59
RFX1-204ENST00000588885 NEBP20929 6669 aa5.09□□□□□ -1.6
RFX1-204ENST00000588885 V9GYY9 64 aa5.08□□□□□ -1.6
RFX1-204ENST00000588885 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
RFX1-204ENST00000588885 PSPHP1O15172 72 aa5.04□□□□□ -1.6
RFX1-204ENST00000588885 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
RFX1-204ENST00000588885 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
RFX1-204ENST00000588885 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
RFX1-204ENST00000588885 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
RFX1-204ENST00000588885 A0A1B0GU33 70 aa4.99□□□□□ -1.61
RFX1-204ENST00000588885 M0QZ58 72 aa4.99□□□□□ -1.61
RFX1-204ENST00000588885 R4GN34 69 aa4.98□□□□□ -1.61
RFX1-204ENST00000588885 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
RFX1-204ENST00000588885 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
RFX1-204ENST00000588885 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
RFX1-204ENST00000588885 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
RFX1-204ENST00000588885 KMT2DO14686 5537 aa4.92□□□□□ -1.62
RFX1-204ENST00000588885 UQCR11O14957 56 aa4.9□□□□□ -1.63
RFX1-204ENST00000588885 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
RFX1-204ENST00000588885 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
RFX1-204ENST00000588885 A0A0D9SG42 100 aa4.88□□□□□ -1.63
RFX1-204ENST00000588885 A6NED7 52 aa4.88□□□□□ -1.63
RFX1-204ENST00000588885 A8MU10 97 aa4.88□□□□□ -1.63
RFX1-204ENST00000588885 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
RFX1-204ENST00000588885 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
RFX1-204ENST00000588885 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
RFX1-204ENST00000588885 KRTAP5-9P26371 169 aa4.85□□□□□ -1.63
RFX1-204ENST00000588885 MT1XP80297 61 aa4.85□□□□□ -1.63
RFX1-204ENST00000588885 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
RFX1-204ENST00000588885 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
RFX1-204ENST00000588885 SPRR2EP22531 72 aa4.77□□□□□ -1.65
RFX1-204ENST00000588885 SPRR2BP35325 72 aa4.77□□□□□ -1.65
RFX1-204ENST00000588885 SPRR2AP35326 72 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms